Scheffersomyces stipitis: PICST_48462
Help
Entry
PICST_48462 CDS
T01023
Name
(RefSeq) predicted protein
KO
K14407
cleavage stimulation factor subunit 2
Organism
pic
Scheffersomyces stipitis
Pathway
pic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PICST_48462
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_48462
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage stimulation factor (CSTF) complex
PICST_48462
U7-dependent histone pre-mRNA processing factors
PICST_48462
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CSTF2_hinge
CSTF_C
RRM_1
Motif
Other DBs
NCBI-GeneID:
4840264
NCBI-ProteinID:
XP_001385974
JGI:
48462
UniProt:
A3LYA2
LinkDB
All DBs
Position
6:complement(1444892..1446010)
Genome browser
AA seq
372 aa
AA seq
DB search
MSARPQIHSTILFIGQVPYDWDEATMNSVVCGCGKVVDVRLGFEYPGRNKGYCFVEMQNT
AEAARAYSLLGQVRIMHPSNRGQVKNLRIESSKEGFSKSTVRSESKPVMALDRQHLPPYV
QIPPEMAANGPPVAPNNVIQTTNMNQVSQSQSQSMNMNQNQNQNYAPASVNSAPGETSMP
HKYTQASKILPQPAQLPFGVPDKINDTLSKIPPAQLVELIASLKNMLSGPDASRAYEVFS
LSPYLATAAAQALLLMGFIDEEVISDSMKSASGTPAPQQPPLPPPPPPQQQYNPQQSYQN
TGYNNSYPSHSSTPQPPAHWRGLPQKAISKLMAMPQDQADLIAQVLTLPPDQIGSLPPDK
QAMVTSLRSQYL
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atgtcagcacggccccagatccattccactatccttttcattggtcaggtgccctacgac
tgggacgaggctaccatgaactctgtagtatgtggctgtggaaaagtagtagatgtgcgt
ttgggctttgagtatcctggccgtaacaagggctactgttttgtcgagatgcaaaatacg
gccgaagccgcacgagcatatagtcttcttggccaggtgcggatcatgcatccttccaac
cgtggccaggtgaagaacttgagaattgaatcttccaaagagggcttcagcaagtctaca
gtccggtcggaatccaagccggtaatggctctagacagacagcacttgcccccatatgtc
cagatacctcccgaaatggcggccaatggtccaccagtagcgcccaacaacgtgatacaa
accacgaacatgaaccaagtgagccaaagtcaaagtcaaagtatgaacatgaaccagaat
caaaaccagaactacgcaccagcctccgtcaattctgctcctggcgaaacatctatgccg
cacaaatatacccaggcttcgaagatcttgcctcagccagcacagcttccctttggagtg
ccagacaaaatcaacgacacactcagtaaaattcccccagcacaacttgtagaacttata
gcttctcttaagaacatgttgagcggtccagatgccctgagagcatacgaggtgtttctg
ttgtccccgtatttggccactgctgctgctcaagctcttttgctaatgggatttatagac
gaagaagtgattagcgattccatgaaatctgcttcaggaactccagcaccacaacagcca
cctcttccacctcctccgccacctcaacaacagtacaatccacagcagctgtaccagaac
actggctataataactcatatccttcacattcttctacaccgcaaccccctgctcattgg
cgtggattgcctcagaaagctataagtaagttgatggcgatgccgcaagaccaagctgac
ttgatagcccaggtgttaactcttcccccggaccagatcggctcgttgcctccagataag
caggcgatggtgacgagcttgagatcacagtacttgtaa
DBGET
integrated database retrieval system
