Scheffersomyces stipitis: PICST_48738
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Entry
PICST_48738 CDS
T01023
Name
(RefSeq) predicted protein
KO
K14416
elongation factor 1 alpha-like protein
Organism
pic
Scheffersomyces stipitis
Pathway
pic03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
PICST_48738
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_48738
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
PICST_48738
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
MMR_HSR1
GTP_EFTU_D3
GTP_EFTU_D4
GTP_EFTU_D2
DUF8451
Motif
Other DBs
NCBI-GeneID:
4840416
NCBI-ProteinID:
XP_001385607
JGI:
48738
UniProt:
A3LY56
LinkDB
All DBs
Position
6:<1325101..>1326882
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AA seq
581 aa
AA seq
DB search
MATDHRVNDSEQSLLSLELAVDSSRLLFKPRSDLMEFLLNGNSTKRRYSTTVDENRKKRI
RRDDLLFHTLTNISLDSEKIAKAKQNFADPSPDDKVLEAQKEAFEQGMGNLKISQAETSK
TVKTTKPAKKIDILEELSTNSTYAKPHKSFVVIGHVDAGKSTLMGRILFDYGIVDARTVN
RLVKEAENAGKGSFALAWIMDQTAEERSHGVTVDICATDFETPTTRFTAIDAPGHKDFVP
QMIGGVSQADLALLVVDSITGEFEAGFAMDGQTKEHTILAKNLGIERICVAVNKLDKEDW
NEERFESIKTQLTEYLTSDEVQFAEEQIDFVPISGLSGNNVVKRDTSIAAFNWYKGPTLG
HYLENVKLSSTVDTDSISKLLSEDFFVSVHDSHKDKGEYKISGKISSGVIQVGETVIAAP
SEEVFKVHSLRVAKKKVDFAIRGELVEMSFKASQVSNESADIFRIGDLVSKVGSPAKTVK
KFTVSLHLFNMDKPLLVGMPFVLFRNNCQVPARVSKLIEITSGKKKKKLLHLVSKQTAIV
EIEVQEGSSLPLTKYSDNKILGRIVIRREGVTIGAGTVVDF
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcaacggatcatcgtgtaaacgatagtgagcagtccttactttcgttggaactcgct
gtggatagcagtagacttctctttaagccaagaagtgacctcatggagttcctcttgaat
ggaaatagcaccaagagaagatactctacgaccgttgatgaaaatagaaaaaaaagaata
cgacgtgacgaccttttatttcatactcttactaacataagccttgattcagagaaaata
gcgaaggctaaacagaattttgctgacccatcgccagacgacaaggtcttggaagctcag
aaagaggcctttgaacagggaatgggtaacttaaagatctctcaagccgagacttctaaa
acggtcaaaaccactaagccagctaagaagatcgatattctagaggaattgtctaccaac
agcacctatgctaaaccgcacaagtcttttgtagtcattggacatgtggatgctgggaag
tctactttgatgggtagaatcctctttgactatggaattgtagatgctcgaactgtgaac
cgtttggtcaaggaagctgaaaatgcaggtaagggatcatttgcgcttgcttggattatg
gaccagacagctgaagaacgttcgcatggtgtaactgtagacatttgcgcaacggatttt
gaaactcccactacaagattcacagctatagatgcacctggccacaaggactttgttcca
caaatgattggaggagtttcccaggctgatttggcacttcttgtagtagattcaattact
ggtgagtttgaagctggttttgcaatggatggacaaaccaaggaacacaccattttagcc
aagaacttgggtatagagcggatatgtgtggctgtaaataagttggataaagaagattgg
aatgaggaaaggttcgaactgatcaagacccagttaacagaatatttgactagtgacgaa
gttcaatttgctgaagagcagatcgactttgtgccgatttccggtttgagtggtaacaat
gtggtcaagcgtgatacctccattgccgcgttcaattggtacaagggccctaccttgggc
cattatcttgaaaacgtgaagttgtcttctacagtagacacagactctatttcaaagtta
ctctctgaagatttctttgtttctgtccatgattctcataaggataagggtgaatacaag
atcagtggcaaaatcagtagtggtgttattcaagttggagaaactgtgattgctgctccc
agtgaagaagtattcaaggttcattctttacgtgtagccaagaagaaggtagactttgct
attcgtggagaattggtagagatgtcgttcaaggctagccaggtttcgaatgaaagtgcc
gatatcttcaggatcggcgacttggtctctaaggttggctctccagccaagacagtcaag
aagtttaccgtgtcattgcatttgttcaacatggacaagccattgttggtcggtatgccc
ttcgttttgtttaggaataactgccaggtacctgccagagtatccaaacttattgaaatc
accagtggcaagaagaaaaagaagttgctccatcttgtatcaaagcaaacagctatcgtg
gagattgaagtacaagagggaagctcgcttcctttgacaaagtattcggataataagata
ttgggcagaatcgtcatcagaagagagggagttacaattggagcaggaacagtagtggat
ttctaa
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