Scheffersomyces stipitis: PICST_51012
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Entry
PICST_51012 CDS
T01023
Symbol
HPR5
Name
(RefSeq) protein required for proper timing of committment to meiotic recombination and the transition from Meiosis I to Meiosis II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03420
Nucleotide excision repair
pic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
PICST_51012 (HPR5)
03430 Mismatch repair
PICST_51012 (HPR5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_51012 (HPR5)
Enzymes [BR:
pic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PICST_51012 (HPR5)
DNA repair and recombination proteins [BR:
pic03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
PICST_51012 (HPR5)
MMR (mismatch excision repair)
Other MMR factors
PICST_51012 (HPR5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
AAA_11
DEAD
Motif
Other DBs
NCBI-GeneID:
4841036
NCBI-ProteinID:
XP_001386414
JGI:
51012
UniProt:
A3LZR3
LinkDB
All DBs
Position
8:<84252..>86978
Genome browser
AA seq
908 aa
AA seq
DB search
MSIDLSEKVLDRIVAELNENQRLAVTAPANGRLQIIAGPGTGKTKVLTSRVAFLLLKEEI
PPHQIVVTTFTKKAANELTERLESLLGDTTIDVSKILVGTFHSICYRVLMMYGKKLGIER
YNIADDRDADHILKEMLAGLSDLELDTLDSLPDEETVIFRPNSGSESKKSSGYDTKKIKR
QISKLKSSGVKHDTYERSASHNKALSLFYRKYQHKLQENNLLDFDDCLLYCYLLVTSFPV
LNFVQHVLVDEFQDTNEIQLQLMYEFARGHPTDPSKRDNVTIVGDPDQSIYAFRDAQAIN
FEKMEKHYLKRYQEPCRIISLTENYRSTSDILDISEKIMRQQQKRVVKSLKSQTKRSFKP
VYYNLTSAEEEAKWVCYQIEHIMALPNTPFMYSDIAVLIRAAYQTRAIENELVRRRIPYF
MIRGRAFWERKEVVAILDYLRVVAHDNDRIAYLRTLNFPKRGFGDKTIQAVERALELETL
AGRDSVYSALTAMVQGENNELKLSTKMKQTLSSYLQFIHKAREMLSNLDAEITNGTLDSE
KRSSKLAELFELIYVHSGLKQEFSKDENQELNIKEVEKQFCEFVPRDEELPLYHGGSESE
QTQDDRNYLARFIHSVGLYETDDDKKENEKKESFHGRVALSTIHGSKGLEWPIVFVPGLS
EGLLPARFAIANGGPEAIDEERRCFYVALTRAKTLLYMSSYTSFGSGMWNIVDTVSRFID
KMKGTTYVSDFQDAFKSWDTLTQLYSHIRKTPPSKDMFPFDNFFRLYKERLTPFIKGETF
AINEQSFKSAPNSLVYGGMGFSSAAQELGKKRRAVGLSSSSKRRPPIIRQANGTNAISGL
NNLTSNVDSTLTNSGFSLNSNKAPKYVSQVAPRPAIASGAKNNKAPAYIPSRQRPGSLHS
KSSNRAPR
NT seq
2727 nt
NT seq
+upstream
nt +downstream
nt
atgagtatcgatctttctgaaaaagttctagaccgtatagttgcggaattgaacgaaaac
caacgtcttgctgtgacagctccagctaatggcaggttgcaaattatagctggaccgggc
actggcaagacgaaggtacttacttcgagagtcgcgtttctcttgcttaaagaggagata
ccgccgcatcaaatagtggttactacgtttaccaagaaggctgccaatgagttgactgag
aggttggagctgttgctaggggatactactatagacgtgtccaagatcttggttggaacg
ttccacagcatctgctaccgcgttcttatgatgtacggaaagaaactcggaatcgaaaga
tacaatattgccgatgacagagatgctgaccatatcttgaaggaaatgttggctggactt
ctggatttggagttggatacgctcgattcactaccagacgaagaaacggtcatattcagg
cccaactctggttccgagagcaaaaagtcttctggatacgacacaaagaagattaaacgc
cagatctccaagcttaagtcgtcaggagtgaaacatgacacctacgaaagactggccagc
cataacaaggctctttctctcttttacagaaagtaccagcacaagctccaggagaataat
ttgctagactttgatgattgcttattgtattgctatctacttgtgacaagttttcccgta
ttgaacttcgttcagcatgtccttgtagatgagtttcaggatacgaacgaaattcaattg
cagttgatgtacgaatttgcacgcggacaccctacggatcccagcaaacgggacaacgta
actatcgtaggagatccagatcaaagtatatatgcattcagagacgctcaagccatcaac
tttgaaaagatggaaaagcactatttgaaacgataccaagagccttgtcgtataatcagc
ttgacagaaaactatagatctacctcagacatcttggacatctccgagaagatcatgaga
cagcaacagaagcgagtggtgaaatcattaaagtcacaaacgaaaagatcatttaagccc
gtttactataacttgacctctgccgaagaagaggcaaaatgggtctgctatcagatcgag
catatcatggctcttccaaatacaccatttatgtacagcgatatagctgttcttataaga
gcagcgtatcagacaagagctatagaaaacgaactagttcgtagacgtataccctacttc
atgattcgtggccgagccttctgggagagaaaagaggtggttgctatactagactactta
agggtagtggctcatgacaatgacagaattgcatatcttagaactcttaattttccgaaa
agggggtttggagataagactatccaagctgttgagagagctcttgaattagaaacttta
gcaggacgcgacctggtatacctggcattgactgcgatggtacagggagagaacaacgaa
ctaaagctatctacaaagatgaaacaaacactttcttcttatctacaattcattcataaa
gcaagagaaatgttgctgaatcttgatgctgagatcactaatggaacactagattctgaa
aaaagatcatcgaagcttgcagaacttttcgagctcatctatgtccattcaggactaaag
caagagttctctaaagatgagaatcaggaactcaacattaaagaagtcgaaaagcaattt
tgcgagttcgttcctagagacgaagaattacctttatatcatggaggttcagaaagtgag
caaacacaagacgatagaaactacctagctaggttcatacactctgttggattgtacgaa
acagatgacgacaagaaagaaaacgaaaagaaagagagcttccatggtagagtagcacta
tctactattcatgggtctaagggtcttgaatggccaattgtgtttgttcctggattatcg
gagggtctcttgcctgctcgatttgccatagccaatggtggtccagaagcaatagacgaa
gaaagaagatgtttctatgttgcgcttaccagagctaagacgttgttgtacatgtcgtca
tatacttcttttggatcaggaatgtggaatatagtagatactgtctcgagattcatagac
aagatgaagggaactacctacgtttccgatttccaggatgctttcaagagctgggataca
ttaacacaattgtattcgcacattcgcaagacacctccatcaaaggatatgtttccgttt
gacaacttctttcgactttacaaggaaaggctaactccatttatcaaaggagaaacattt
gccataaacgaacaaagtttcaagtcagcgcccaatagtctagtgtatggtgggatgggc
ttttctagcgcggcacaggagttgggtaaaaagagaagagccgttggactcagcagttct
tcgaaacggagaccgccaattatacgacaagccaatggaaccaatgctatttctggcttg
aataatttgacttcaaatgtagattcgactttaacaaattcaggtttcagcttgaactct
aataaggcaccaaagtatgtttctcaagtagcacccagaccagcaattgctagtggtgct
aagaataacaaagctcctgcttatatacctagtcgacagcgaccgggtagtttgcattcc
aaatcttcaaacagagcgccacgataa
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