Scheffersomyces stipitis: PICST_51353
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Entry
PICST_51353 CDS
T01023
Symbol
BRR2
Name
(RefSeq) RNA helicase-related protein required for pre-mRNA splicing
KO
K12854
pre-mRNA-splicing helicase BRR2 [EC:
5.6.2.6
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PICST_51353 (BRR2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pic03041
]
PICST_51353 (BRR2)
Enzymes [BR:
pic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
PICST_51353 (BRR2)
Spliceosome [BR:
pic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U5 snRNP specific factors
PICST_51353 (BRR2)
Complex C
U5 SnRNP specific factors
PICST_51353 (BRR2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec63
DEAD
SNRNP200_wHTH
Helicase_PWI
ResIII
BRR2_plug
Helicase_C
AAA_22
DEXQc_Suv3
CxC4
Motif
Other DBs
NCBI-GeneID:
4850829
NCBI-ProteinID:
XP_001387271
JGI:
51353
UniProt:
A3GEY0
LinkDB
All DBs
Position
1:169603..175980
Genome browser
AA seq
2111 aa
AA seq
DB search
MSGSGEAKSNQYSYDEMSNKVIRNSHRPRQDDEKYNPSSLIGHISVSEMGSRVSKGSNSD
REKKSSSLVKKSANSGEPKSIAQYTSAYENISYQPTNEETGHIFDLLMAEVRQVLPDSNH
EVVLSASDAILEILKEKDSTVGEKKKQIIELIDYQISDVQLNELINLSNRIYDYDIGHVD
LENTANDESPDEIVAVEFDMSDDDGEVEEDIPEEIENDHNNIINREEEENDSQALTNEVI
IAESTKKEAEDYTLSIKDIDEYFLQRRISKLFDSADAAESSEKAKEVYKIMIDKDVSDRD
LENEIMELMDYDHFDFVRLCIENRWKIVYRIQLLQAEDSDGENKLFEEMKKLGLSDLVAE
FVEGTQKKRRLSEAEDPTKGKKIKSEKKTREPKIVDLDALSFDQGSRLMTNTSIKLPQGS
YQQNKKSYNSIYIPPPNPPPQEEGEKLVSIEDLPQWARVAFPTTETTHLNRVQSKVFPEA
FHSDRNLLLCAPTGAGKTNVAMLSVLRTINNYRNAETGKIDLKNFKIVYIAPLKALVQEQ
MREFQRRLTSNFNLVVNELTGDSSLSARQIHETQVIVTTPEKWDVVTRKNDVPYVKLVRL
IIIDEIHLLHDERGPVLENILSRTLRQVEATAEPVRLIGLSATLPNYKDVAQFLRVDLQK
GLFYFDASYRPCPLEQQFIGIKEKKAIKKLTAMNEACYDKLLECITKKHQLIIFVHSRKD
TFKTAKWLKDKLEEDGKSWNTEVSTAEILKQEANGFKDLSLKEIVPGGIGIHHAGLIKGE
RSVVEDLFAQGHLQVLVSTATLAWGVNLPAHTVIIKGTETYSPERGTWIQLSPQDILQML
GRAGRPRYDKSGEGVIITSQDDIQYYLAILNQQLPIESQLMSRLPDSVNAEVVLGTIKSR
EDAVSWLGYTYLYIRMLQTPALYHVGADYGDDKILYERRVDLVHSALTILHESKLIIYDE
LSGSVKSTELGRISSHFYINYDTIKLYNTQLKSWFSEIEILKVFASSGEFKFIPSRQEEK
LEVAKLMEKCPIPIKERPNEPLAKVNILLQTYISNLKLDGFALMADMTYISQNAGRLLRA
MYEIALKKGWSSVSKTLLNFCKMVSRRMWTANSPFRQFGAFVSKDIVKATESSHLPWLSY
FTLDAAELAEAINFKGNSGKAYQLLQKFPKLSLSYYCQPITSSLVRVQIEAIANWEWDYE
IHGNSESFVVLVEDCDGEKILYADKLVINEKYAGREHLIDFVVPILEPDQPAYFVSLISE
KWIQSEWKIPIVLSDLRFPKKFPSLTESIKLQNVPTTSLRNPQFIESFEFSYFNKFQSQI
FPNLFGSNENIFIGISKGGGKTVCAELAILNHWNEAGGRIVYLTPNKSKIEKLARVWTKK
YNNLEKSVSKLSGEVAKDVSVLGSNHLVLATPVQFYRLSNRWRQRKAVQAVDLIIADDLH
TLGANRKGSMYEVVLARMRFISAQKQTNLRIVALSSSVANGRDIGEWLGCAKNNIFNFDP
KERFNEIKEIELQASSVERKDLVVSSFLNQTYDFLKLDSEGKKIVFVPSRKHCIEIAIEF
VQRASLDNLQLLKVEIEDLKPYLKRVTDETIKEMLSYGVGCYYEGMNATDKVIVEKMFEN
NVLSILLAAKETSSYAPAADGIVVLSTQEYDGKEHRYIDYSVNDILEMVGCCKNGLINQG
NVLILTNECKLKFYSKFLNEPAPVESYVPTMVHDLFLSEISCKTFTSKQDCMDWFTFTYF
YRRLQINPSFYDAKDTSQLGISEFLSEMIESTLSDLEGAKLIEFEEDEETIVPLNGAMIA
AHYNVSFNSMKLFAGLDNRVKLKGILQAITSAEEFELIPVRYNEDSILSRIYNKVPYKVD
DENYESPFFKAFILLQAHFSRIPLPVDLQIDQKIVLNTILNLLYACIDTLSSEGYLNAIN
AMDLSQMVVQAVWNNDSPLKQVPNFTNDILKRCATYKVETVYDIMSLEDDERDDVLRLEG
DKLNRVAEFVNKYPNIDMTYELDVSEPIVANEPKLITIKLERDEELDDLDAITDFYPGTK
AEGWWVVIGDAATKQLYAIKKTTIKQQSQQLQLEFTVPTAGHHELTLWCMCDSYVDADKE
VGFSVDVEPED
NT seq
6336 nt
NT seq
+upstream
nt +downstream
nt
atgtcaggttcgggagaggcaaagctgaaccaatacagttacgatgagatgtctaacaaa
gtgattcgtaactcacacaggccgcgacaagatgatgaaaagtacaatccatcttcattg
attggacacatttccgttctggaaatggggagtcgagtttcaaaaggtagcaatagcgac
agagaaaagaaatcaagctcgttggtgaaaaagtcagcaaattctggagaacccaaatcc
attgcacagtatacttcagcatatgagaacatttcgtatcagcctacgaatgaagaaacg
ggacacatattcgacctcttgatggcggaagtgcgacaggtcttgcctgattcaaaccac
gaagtcgttctatcagcgtctgacgcaattttggagattttgaaagaaaaagacctgact
gtaggagagaagaagaaacagataatagagcttatagactatcagatttctgacgttcaa
ttgaacgagttgataaacttatcgaaccgaatttatgactatgatatcggccatgttgat
ttagaaaatactgctaacgatgagtctcctgacgagatcgtagcggtagagtttgacatg
agtgatgacgatggagaagttgaagaggacattcctgaagaaatagaaaatgatcacaac
aatataataaatagagaagaggaagagaatgactctcaggcattaaccaacgaagttata
atagccgaatctacaaagaaggaagcagaagattatacactttcgataaaagatatcgat
gagtacttcctacaacggagaatactgaaattattcgacagtgcagatgctgccgagagt
ctggaaaaggcaaaggaagtctataagattatgattgacaaggatgtgtctgaccgagac
ttagagaacgagattatggagttgatggattatgaccattttgatttcgtcagactttgc
atagaaaacagatggaagattgtatatagaatacagctattgcaagctgaagactccgat
ggagaaaataagctatttgaggagatgaaaaagcttggattatctgacttggtagccgaa
tttgtcgaaggaacacaaaagaaacgaaggctctctgaggctgaagatccgacaaaaggt
aaaaagattaaaagtgaaaagaaaacaagagaaccaaaaattgttgatttggatgctctt
tcatttgaccagggttcaaggttgatgaccaatacttcaataaaattaccccaaggatcg
tatcaacagaataagaaatcatacaacctgatctacatcccaccacctaatcctccgcct
caggaagaaggggagaaactagtctctatagaagacttaccacaatgggcaagagtagca
ttcccaactacagaaacaacccatttaaacagagtacaatccaaagtgtttccagaagca
ttccactcggacagaaaccttctactttgcgctccaactggtgcgggtaaaaccaatgta
gccatgttatctgtgctcaggacaatcaacaactatagaaacgcagaaacaggaaaaatt
gaccttaaaaatttcaaaatagtctacatcgcaccattgaaagctttggttcaagaacaa
atgcgtgaattccaaagaagattaacttccaatttcaaccttgttgtcaacgaattgaca
ggtgactccagcttatcagctcgtcagatccatgagactcaggtcattgtcacgactcct
gaaaagtgggatgtagtaacaagaaagaatgatgttccctacgttaaacttgtcagatta
ataatcattgatgaaatccatttgttgcacgacgaaagagggccagttcttgagaacatt
ctaagtagaactttgagacaagtagaagctacggctgagcctgttagacttattggactt
tctgctaccttgcctaactacaaagatgttgcacaattcctcagggttgatcttcaaaag
ggtttgttctacttcgatgcttcgtaccgtccttgtcctttagagcaacagtttattggt
atcaaggaaaagaaggccatcaaaaaattaacagccatgaacgaagcctgttacgacaag
ttgcttgaatgcataacaaaaaaacatcaactaatcatatttgtacactctagaaaagat
acttttaagacagccaaatggctcaaagacaaattggaagaagatggaaagtcgtggaat
actgaagttagtacagcagaaatcttgaaacaagaggccaatggtttcaaggatttaagt
ttgaaagaaatagtgccaggaggaataggaattcaccacgctggtttgatcaaaggggaa
aggagtgtggttgaagatttgtttgctcagggccatcttcaagttcttgtttctactgct
acgttagcgtggggtgtgaatttgcctgctcatactgttatcattaagggtacagaaact
tactcccctgaaagaggaacctggattcaattatcacctcaggatattttgcaaatgttg
ggtagagctggtagacctagatatgacaaaagtggagagggtgttataattacgtcacaa
gatgatatccaatactacttggccatcctcaaccagcagttgcccattgagtcgcaacta
atgagcagattgcctgatagtgtaaatgctgaggttgttcttggtaccattaaatcaaga
gaagatgctgtgagctggctaggatacacctatttgtacattagaatgttgcaaacccca
gcattgtatcacgtcggtgctgattatggcgatgacaagatactttatgagagaagggta
gatttggtacacagtgctttgactattctccatgaaagcaagttgatcatttacgatgaa
cttagtggaagcgttaagtcaaccgagctagggagaatatcatcgcacttctacatcaac
tacgacacaattaaattgtacaacactcaattgaagtcgtggttttctgaaatcgagatc
ctcaaagttttcgcttcttcaggagagttcaagttcattccttcaagacaggaagagaaa
ttggaagtggccaagttgatggaaaaatgtcctattcctatcaaagaaagacccaatgag
ccacttgcgaaagtaaacatattgttgcagacttacatttccaacttgaagttggatgga
ttcgcgttgatggcggacatgacatatatctcccagaatgcaggtcgtttgctaagggca
atgtatgaaatcgctttgaagaaaggttggtcctcggtttcgaagactcttctcaacttt
tgcaaaatggtatcccgtcgaatgtggacagccaattctccattcaggcaatttggagcg
ttcgtttccaaagatattgttaaagcaacagaaagttcacatttaccttggctaagctac
tttactttggatgccgctgagcttgccgaagcaattaactttaagggtaatagtgggaag
gcatatcagctcttgcagaaatttcctaagctctctctaagttattactgtcaaccaatt
acttcaagtttggtcagagttcaaatcgaagccatcgccaactgggaatgggactatgaa
atacatggcaattccgagagtttcgtagtccttgttgaggattgtgatggcgaaaagatc
ctttacgcagacaaattggttatcaacgaaaagtatgctggccgcgaacatttgattgac
tttgttgtgccaattttggagcctgatcagccggcttacttcgtcagcttgattagcgaa
aaatggatacaaagtgaatggaagattcctattgttctttcagatttgagatttccgaag
aaattccctagtttgacggagctgataaaattgcaaaatgttcctacaacatctttgagg
aatccacaatttatcgaatcatttgaattttcttatttcaataaattccaatctcagatt
ttcccaaatttatttggaagtaatgaaaatatcttcattggaatatctaaaggtggtggt
aaaactgtttgtgccgagcttgcaattttgaaccattggaatgaagctggtggccgcata
gtatacttaacaccaaataagagcaagatcgaaaagcttgccagggtttggactaaaaag
tacaacaacttagaaaagtctgtttcgaaactatctggtgaagttgctaaggatgtttct
gttcttggatcgaaccatttagttcttgctactccagtacagttctatcgtctttctaat
cgttggagacaaagaaaagcagtacaagcagtcgatttgataatcgctgatgatcttcac
acactcggtgcaaaccgaaaagggtctatgtacgaagttgtccttgcaagaatgagattc
atttctgctcagaagcaaacgaacttaagaattgtagcactttcttcttcggttgctaat
ggtagagacattggtgaatggcttggatgtgcaaagaataacatatttaattttgatccg
aaggaaaggttcaatgaaatcaaggaaattgaattacaagcaagcagcgttgaaagaaag
gatttggtagtttcttcatttttaaaccaaacatatgactttttgaaacttgactcagaa
ggaaaaaaaattgtctttgtgccatcaagaaagcactgtattgaaattgcaattgaattt
gtacagagagctagtcttgacaatttgcaattgttgaaagtcgaaatcgaagacttgaag
ccatatttaaagagagtaaccgatgaaactattaaagagatgctttcatatggggttggc
tgctactacgaagggatgaatgccacggataaggtgattgtggaaaaaatgtttgagaat
aatgttctcagtattcttttggccgcaaaagagacatcctcatacgccccagctgcagat
ggcatagttgttctaagcacgcaggagtacgatggcaaggagcatcgttatattgactat
tctgttaatgacatattggagatggtaggttgttgcaagaatggtttgatcaatcaagga
aatgtattgattctcaccaacgaatgtaagttgaagttctacagcaagtttttgaatgag
ccagctcctgttgaaagttatgtacctacaatggtccatgacttatttctcagtgagatc
agttgcaaaacattcacgtccaaacaagattgcatggattggtttacatttacctacttt
taccgtagattgcaaattaatccaagtttctatgatgcaaaagacacttctcaattgggc
atctctgaattcctttctgaaatgattgaatctacactttcagatttggaaggtgccaaa
ttgattgaatttgaagaagatgaagaaacgattgttcctttgaatggcgctatgatagct
gctcattataatgtcctgttcaattctatgaagttattcgctggtcttgacaaccgtgtg
aagttgaagggtattttacaggccatcacgtccgctgaagaatttgagttgattcctgtc
agatataatgaggacagtattctttccagaatctataacaaggtgccatataaggtagat
gatgaaaattatgaatctccgttcttcaaagcttttattctcttacaagcgcacttttcc
agaatcccacttccagttgatttacaaatcgatcaaaagattgtattgaacaccatcttg
aacttgctatatgcatgcattgatacactttctagtgaaggttacttgaatgctatcaat
gctatggacttgtcacaaatggtggttcaagccgtatggaacaatgatagtcctttgaaa
caggttccaaacttcaccaatgacatcctcaagagatgtgcaacgtataaggttgaaaca
gtgtatgatatcatgtctcttgaagatgatgaaagagacgacgtcttgcgattggagggg
gataaactcaaccgtgtggctgagtttgtcaacaagtatcctaacatagacatgacctac
gagcttgatgttagtgaaccaattgtcgccaatgagcccaagcttattaccattaaactt
gaaagagatgaggagttggatgacctagatgcaattaccgatttctatcctggcaccaag
gctgaaggatggtgggtcgttataggagatgctgctactaagcaattgtatgcgatcaag
aagacgaccatcaagcagcaatcacagcaattgcagttggagttcaccgttcctactgct
ggccaccacgagcttacgttatggtgtatgtgtgattcgtatgttgatgctgataaggag
gttggatttagcgtagatgtagaaccagaggattag
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integrated database retrieval system
