KEGG   Scheffersomyces stipitis: PICST_52962
Entry
PICST_52962       CDS       T01023                                 
Symbol
ATG18
Name
(RefSeq) Autophagy-related protein 18
  KO
K17908  autophagy-related protein 18
Organism
pic  Scheffersomyces stipitis
Pathway
pic04136  Autophagy - other
pic04138  Autophagy - yeast
Brite
KEGG Orthology (KO) [BR:pic00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04138 Autophagy - yeast
    PICST_52962 (ATG18)
   04136 Autophagy - other
    PICST_52962 (ATG18)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pic04131]
    PICST_52962 (ATG18)
   03029 Mitochondrial biogenesis [BR:pic03029]
    PICST_52962 (ATG18)
Membrane trafficking [BR:pic04131]
 Autophagy
  Autophagosome formation proteins
   Atg18-Atg2 complex
    PICST_52962 (ATG18)
Mitochondrial biogenesis [BR:pic03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    PICST_52962 (ATG18)
SSDB
Motif
Pfam: PROPPIN Beta-prop_EML_2 WD40_Prp19 WD40 WD40_CDC20-Fz WD40_WDHD1_1st WD40_MABP1-WDR62_2nd Beta-prop_HPS5 Beta-prop_Vps41 WDR55 WD40_MABP1-WDR62_1st Beta-prop_EML Beta-prop_WDR90_POC16_2nd WDR90_beta-prop_4th EIF3I Beta-prop_IFT140_2nd BCAS3_WD40 Beta-prop_IFT140_1st B-prop_COPA_B_2nd NBCH_WD40 Beta-prop_WDR19_1st Beta-prop_IFT80_2nd Beta-prop_RIG_2nd Ge1_WD40 Beta-prop_DCAF12 Beta-prop_TEP1_2nd Beta-prop_NWD2_C PFF1_TM
Other DBs
NCBI-GeneID: 4850992
NCBI-ProteinID: XP_001387763
JGI: 52962
UniProt: A3GFE3
LinkDB
Position
1:complement(651953..653698)
AA seq 563 aa
MLKAQSAAAGSLHQTLSQYSASIATDGSSSVTGSFKTDDSVNFITFNQDASCIAVGLNNG
YKIFNCKPKFGKCYQIRKEESVGIIEMLYCTSLLAIVALGEEPGSSPRKLKIVNTKRQTT
ICDLIFPSTILQVKLTKSRLIVLLEEQIYIYDITTMKLLHTIETSPNSIGLCALSTTPDN
DGNNYLAYPSPPKTITHDSLLASGINTNGGTNSVVNNISSVSNSPNRVGDVIMFNLNTLQ
PMSVIEAHKSALAAITLSSDGSLLATASDKGTIVRVFSVATGVKLFQFRRGTYSTKIYSL
SFSSDNNYVVATSSSETVHIFRLGESEALENKHKKKKASTPKPTQPETIEEEDATLLQER
PSQESTQDDDEFADDGDDSDEAVEGDDNDDESLEVISNKQRKLSQGSSNSFASFNSGTDD
SSQAAKNEPLIDQNRLSVARLIRRSSQTLGRKAAQRMGDFLPSRFSSILEPTRHFASLKI
NAIGKDVKSIAVMNNELQEDLVPQAFLMRKDSDSYLSKEMLSLNLLHIYVVTSEGFFYTY
GLDPERGGDCILLHQYSLIDESN
NT seq 1692 nt   +upstreamnt  +downstreamnt
atgctcaaggcacagtctgctgctgccggaagtctccaccagactttgtcgcagtattca
gctagcattgccaccgatggctcctcgtctgtcactggaagcttcaagactgatgactct
gtaaatttcatcaccttcaaccaagatgcctcgtgcatcgccgtaggtctcaataacgga
tacaagatattcaattgcaagcccaagttcggcaaatgctaccagattcgcaaggaagag
tccgtaggtattatagagatgttatactgtacatctcttttggccattgtagcgttggga
gaggagcctggttcatctccacgcaaactcaagatcgtcaacacaaaacggcaaacgacc
atttgtgacttgatcttcccgtcgacgattctccaggtcaagttgacgaaatctcgactc
atagtgttgttggaggaacagatctatatctacgacatcaccaccatgaaactattacac
actattgaaaccagtcctaactccattggtctctgtgctctttccactacgcccgataac
gacggcaacaactatttagcatatccgtcccctcccaaaaccatcactcacgactcgttg
ctagcttcaggtataaataccaatggaggcaccaattctgtcgtcaacaacattctgtca
gtaagcaatagccccaatcgagtaggtgacgtaattatgttcaatttaaacacattacaa
ccgatgtcggtgattgaggctcacaagtcggcacttgctgccatcacactttccagtgat
ggaagcttgttggcgacagcctcagacaaaggtaccattgtaagagtcttcagtgtagcc
accggagtcaagcttttccagtttcgcagaggcacctactctacaaagatctactcatta
agcttcagctcagacaacaattacgtggtggcgacgtcgtcaagtgaaacggtacatata
ttcagacttggagaactggaagctctagaaaacaagcataagaagaagaaagcttcaacg
cccaagcctactcaacccgaaacaatagaagaagaagatgcgactttattgcaagaacgt
ccactgcaggaatcgacccaagacgacgatgagtttgctgatgacggcgacgatagcgat
gaagctgtagaaggtgatgacaacgacgatgagtcgctcgaagtgatttccaataaacag
cgtaagttatcacaaggctcgtcaaattcatttgccagtttcaattctggaacagacgat
tcttcacaagcagccaaaaacgaacctttaatagaccaaaatagactatcggtagccaga
ttgataaggcgctcgtcgcagactttgggacgtaaagcagcgcaaaggatgggagacttc
cttccactgcgattttcgtcgatcttggaacctacgaggcattttgcctcgctcaagatc
aatgccataggcaaggatgtcaagtccatagccgtgatgaataacgaattgcaagaggat
ttggtaccccaggcatttttgatgagaaaagacagcgactcttatctcctgaaggagatg
ttgtcgttgaacctattacatatatacgtagtaacatcggaagggttcttctatacctac
gggttggatcccgagagaggaggcgactgcattttattgcaccagtactccttgattgac
gaaagtaattag

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