Scheffersomyces stipitis: PICST_53324
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Entry
PICST_53324 CDS
T01023
Symbol
HCM1
Name
(RefSeq) fork head family transcription factor
KO
K09413
forkhead transcription factor HCM1
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pic03000
]
PICST_53324 (HCM1)
Transcription factors [BR:
pic03000
]
Eukaryotic type
Helix-turn-helix
Fork head/winged helix other regulators
PICST_53324 (HCM1)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Forkhead
Motif
Other DBs
NCBI-GeneID:
4851769
NCBI-ProteinID:
XP_001386867
JGI:
53324
UniProt:
A3GHM0
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Position
1:<2782291..>2784186
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AA seq
560 aa
AA seq
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TKNASYNAKMTTPPESVFVSKKKTLSFTPNSQNIDLTNNHINHNQDHILQNAIITSRSLL
LSPAFSSPQRPNKFNSSIGLSSPAPAKSFNHAANSYMDPNSSFLSSDSAKKVKKSKASKD
TAFDLHSEDKPPYSYATLIGISILSNEYKKLTLSQIYSWISDTFKYYKREDVGWQNSIRH
NLSLNKAFVKGEKSKDGKGHFWCIKDGFEEQFLKSRSVKKSSYHEVMDQIRNANLKNRED
TKRTMNAIPSSPNIANESFEEQPKKRKVSDLDRAADYDGVYDYTYDDEDNSRAGDDEDIT
HILDPPVKKHKPDSMDDPFKQWDDTINLHNSNNLTKTPTASNPPQFTITGSPNKPLLAGK
NLTYTSSFSCNSNLELSPIRPTETGPLLEPITPGTNAYQQNQTGLQQLHPPINTTSLPSL
LNSSISSNQPGSSGQKTPKSNVLRTPLRNLRTPQTNSIMKKLWNSPSYLDDFYFSPLVNN
HIFGSGVVSRTVHHSLTSYDDDDMILRNYEHNQQQSINSSPFISSASVDTSRNLFNDFKK
VDESSAATSVSESSSAKDAE
NT seq
1683 nt
NT seq
+upstream
nt +downstream
nt
accaagaatgccagctacaacgccaaaatgaccactcctcccgaatcggtttttgtctcg
aaaaagaagactctcagcttcacacctaatagccagaacatcgacctcacaaacaaccac
atcaaccataaccaagatcatattctacaaaacgcaataataacatcgagatcactcttg
ctttctccagccttctcttctccacagcgccccaacaagttcaactccagcatcggcttg
tcgtctccagctccagccaagagcttcaaccatgctgcaaactcgtatatggatcctaac
tcgtcattcttgtcctcagactctgccaagaaagtaaagaagtcaaaggcatccaaagac
acagcttttgatttgcactcagaggacaagcctccctattcgtatgctacattgattggg
atctccatcttaagcaacgagtacaagaagttgacgttgtcgcaaatctacctgtggatt
tcagacaccttcaagtactacaagcgtgaagatgttggatggcagaattcaattcgtcac
aacctttcattgaataaagcctttgtaaaaggcgaaaaatccaaagatggaaagggccac
ttctggtgtatcaaagatggctttgaagagcagttcttaaaatctagaagcgtcaagaag
agctcgtaccacgaagtcatggaccagatcagaaacgcaaatctcaagaaccgagaagat
acaaagcgcaccatgaatgcaatcccatcatctccaaatattgctaatgaaagctttgaa
gaacaaccaaagaagagaaaggtatctgatctcgatagagctgctgactacgatggagtt
tacgattacacgtacgatgacgaagacaactctcgtgctggagatgatgaagacatcacc
catatcttggatcctcccgtgaagaaacacaagccagactcaatggatgatccgtttaag
cagtgggacgatacgataaacttacacaactctaataatttaactaagacgcctactgct
tccaacccccctcagttcacgataactggatctcccaacaaacctttgctagcaggtaag
aacttgacgtatacttcgtctttcagttgtaactcgaatttggagttgtctccaatcaga
cccacagaaactggacctttgttggagccaataacgccaggtactaatgcctaccagcag
aatcagactgggttacaacagttgcaccctccaatcaacaccacctcccttccatctctc
ttgaattctagtatactgctgaaccaacctggttctagcggccaaaagactcctaagagt
aacgtcttgagaacaccattgcgcaacttgagaactccacagaccaactccatcatgaaa
aagctatggaactctccttcttacttggacgacttctacttcagtccattggtcaacaat
catatatttggtagtggtgtggtttctcgtactgtacatcatagcctaacttcttacgac
gatgacgatatgattttgcgcaactacgagcacaaccagcagcagtctatcaactcgtca
ccattcatttcatctgcttctgtagacacaagcagaaacttgttcaacgacttcaagaaa
gtagatgaaagcagtgcagccacttcggtgagcgaaagctcttcagctaaggatgccgaa
tag
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