Scheffersomyces stipitis: PICST_53344
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Entry
PICST_53344 CDS
T01023
Name
(RefSeq) predicted protein
KO
K13095
splicing factor 1
Organism
pic
Scheffersomyces stipitis
Pathway
pic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PICST_53344
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pic03041
]
PICST_53344
Spliceosome [BR:
pic03041
]
Complex A
Other components
Complex A specific factors
PICST_53344
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SF1-HH
KH-I_KHDC4-BBP
KH_1
zf-CCHC
zf-CCHC_6
zf-CCHC_4
zf-CCHC_3
Motif
Other DBs
NCBI-GeneID:
4851673
NCBI-ProteinID:
XP_001387052
JGI:
53344
UniProt:
A3GHC4
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All DBs
Position
1:complement(<2505683..>2507053)
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AA seq
392 aa
AA seq
DB search
MKAPTPVVDDSLATRWAGKPSRYKKFDSIRLDTIITGHLTQEQADAYQQYFRIEETSAIL
RIAQQQRKPILGLLPSGNLEQNPHFKREPSPPPKYDNFGNRINTRELRTVAMLEKERNFL
VEEVASRIKNYVPPADYRKPAKTVEKLYIPVKDYPDINFMGLLLGPRGNTLRQMQEESGA
RMQLRGKGSVKDGKSATDDDDTGGEMTSTSFSNPTLDSNTDDMHVLITADAQHKIAIAIK
LANEVIEKAISSPVGQNDLKRGQLRELAVLNGTLRETKPYNPEARVQRKGLDISQIVCKS
CGGIGHYARDCKPTSGIVPPLPVGIKPPAPPPPPATGFPPPPPPSVKPPPPPSAAKPPPP
PSEVKVPPPPPEVKVPPPPPEVKVPPPPPPSS
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaaagctccaactcccgtggttgacgattctttggccaccagatgggctggaaaacct
tcgagatacaagaaatttgactccataaggctagataccatcataacaggacacttgact
caagaacaagcagacgcctaccaacagtatttcagaatagaagaaacctcggccattctc
agaatagcgcaacagcaacgaaagcccattctcgggctacttccttctggaaatcttgaa
cagaatccccatttcaagcgagaaccatctcctcctcccaagtatgacaatttcggaaat
cgtataaataccagagagttgcgcactgtagcaatgctcgagaaggaaagaaacttctta
gtggaagaggtagctagtagaatcaaaaactatgtgccaccagcagattatagaaaacca
gctaaaacggtagaaaagctctatatccccgtaaaggactacccggatatcaactttatg
ggtctcttgcttggacccagaggtaacaccttgagacagatgcaagaggagagtggtgcc
agaatgcagttgagaggaaaggggtcggtcaaagatggaaaatcggctactgatgatgac
gataccggtggagaaatgacgtcaacgtcgttctcaaatcctactctagactccaacaca
gatgatatgcatgtactcataacagcagatgctcaacataagatcgctatagctatcaaa
ttagccaatgaagtgatagaaaaggccatttcttcacctgtaggacaaaatgatttgaag
cgaggacaattacgagagttagctgtgttgaacgggactttaagagaaacaaagccatat
aacccagaggcccgtgtccagagaaaaggattagatatctctcaaatagtatgcaaatcc
tgtggaggcattggtcattatgccagagactgtaaacctacttcaggaattgttccaccg
ctacctgtaggaatcaaacctcctgctcctccacctcctccagccactggatttccacca
ccaccaccaccttcagttaaaccgccaccaccaccttcagcagcaaaacctccacctcca
ccatcagaagtcaaagtcccacctccaccaccagaagtcaaagtcccacctccaccacca
gaagtcaaagtcccacctccaccaccaccatctagttga
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