Scheffersomyces stipitis: PICST_54439
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Entry
PICST_54439 CDS
T01023
Symbol
CHL1
Name
(RefSeq) syntenic
KO
K11273
chromosome transmission fidelity protein 1 [EC:
5.6.2.7
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_54439 (CHL1)
Enzymes [BR:
pic01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
PICST_54439 (CHL1)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Other sister chromatid cohesion factors
PICST_54439 (CHL1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
ResIII
IL1_propep
UPF0172
DUF7260
Motif
Other DBs
NCBI-GeneID:
4836691
NCBI-ProteinID:
XP_001382279
JGI:
54439
UniProt:
A3LN13
LinkDB
All DBs
Position
2:224925..227432
Genome browser
AA seq
835 aa
AA seq
DB search
METSICSPENRYSHPYKPYDIQIQLMDAIYDTIDNGYKIGLFESPTGTGKTLSIICSTMT
WLRDYKRENVFQPMAGLDGSDTDDSDSDDEPEWVKKAYRDTIVSRSENKMVDYEMYLEKI
QNEYENNIQTAGSIKSSRPPKKKRSTAKKQELHDEDFLPEDYYSDSEVKPNADKLTVLES
EISQLLDKVNGRTDEIEMTNDCPVNIYFSSRTHSQLNQFAHQLALTKFQSSFKGVEERTK
YLPIGSRKQLCINEKVKSFSKNDSNINDVCVDLQKSKEGCQFLPKDYLNSSLTKKLSDLS
LSKIHDIEEIADLGSNMKVCPYYSVRKGVEMTEIISLPYQILLSESTRAILNLQIEDSIV
VIDEAHNLMDTITSMHSVCITIGEMNSIIKALKFYLGRFLKKLNSGNRIHLMKLIKLCQL
VISFIQKSEKCNNIKVGNEINTSDIYQNSTGDMLNIHILEAFLAKSKIAYKIESYMEKVA
ENENEQAKTSSSNPLLYKIVQFLKCLVNPSKEGKFFWDSTNGITSIKYMLLDPSSVFKDI
VSKARCVILCGGTMEPMSEFKNFLFPYVEDKKIKSFSCNHIIPPDNLKVYPVSSQNNVTL
EFSFDNRNNPLMIEALGASIVRICQSVPDGVVVFFPSYKYMNHILSIWKSTDVLTQIESQ
KKLFEEPTSASQVQTILADYANTIKEEKKGAILFSVVGGKMSEGINFADELGRAVVMVGL
PYPNAYSGEIIAKRKFIESEAIARGCSMSEAQRNSQSYYENLCMRAVNQSIGRSIRHIND
YSIIYLVDCRYQSSRIQNKLSSWVRKRIETRNYNMDQIMEETRDFFMCKTIARLA
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggaaacttcgatatgttcgccagaaaaccgatatagtcacccctacaagccgtatgac
attcagatacaacttatggatgccatttacgacaccatcgacaacggttacaaaatcgga
ctctttgagagtcctactgggacaggcaaaaccttatctattatttgctctaccatgacg
tggctccgcgattacaagcgggagaatgtatttcaacctatggctggtttagatggaagt
gatacagatgatctggattcagacgatgagccagagtgggtcaagaaagcatatagagat
acgatagttctgagatcagagaacaagatggtagattacgaaatgtaccttgaaaagatc
cagaacgagtacgagaacaacatacaaactgctggaagtattaaaagcagccgaccacct
aagaaaaagaggtctactgcaaagaaacaagagctccacgatgaagacttcttgcccgaa
gactactatagtgattccgaagttaagccgaatgctgataagctcacagttcttgagtct
gaaatttcgcaattgttagacaaagtgaatggaaggacggatgagattgagatgactaac
gattgccctgtaaatatatacttttcctcgagaactcattcgcaacttaaccaatttgct
catcaattggcattaactaaatttcaatcatcgtttaaaggagtagaagaaagaacaaag
tacttgcctattggttctagaaagcaactttgtatcaacgaaaaagtcaagagcttctcg
aaaaacgatctgaacataaatgatgtctgtgtagacctccagaaatccaaggaaggatgc
caatttcttcccaaggactacctaaattcgtctttaacgaaaaagctttcggatctcagt
ttgtctaagatccatgacattgaagaaatcgcagacttaggttcaaatatgaaggtatgt
ccctactatctggtcagaaagggagtggaaatgacagagataatatcgttgccgtaccag
attctacttctggagtctacgagagccattctcaacttgcaaatcgaagattccatagtt
gtaatcgatgaagcacacaacttgatggatacaatcacgtcgatgcactcagtatgtatc
actattggcgaaatgaatagcattatcaaagctcttaaattctacctcggcaggtttctt
aagaagttgaacagtgggaacagaattcacttgatgaagctcatcaaactctgccagttg
gtgatttcatttattcagaaactggagaaatgcaacaatatcaaggttggaaacgaaatc
aatacaagcgatatctaccagaactccacaggagatatgttgaatatccacatcttggaa
gcgttccttgcgaaatcaaaaatagcatacaagattgaatcgtacatggaaaaggttgct
gaaaatgaaaacgaacaagcgaaaactagtagctctaatccgcttttatacaaaattgtt
caattcttgaagtgtttggtcaacccttccaaggaagggaagttcttctgggactcaacc
aacggcattacatccatcaaatacatgcttttggaccctagttctgtgttcaaggatata
gtttccaaggcccgctgcgtgatactatgtgggggtactatggaaccaatgtcagaattc
aagaacttcttgtttccatatgttgaagacaagaaaatcaaatccttcagttgtaatcat
attataccacctgacaatttgaaagtgtatcctgtatcttctcaaaacaatgttacttta
gaattcctgtttgacaatagaaacaacccgttgatgatcgaggctctcggagcttcgatc
gttcgtatctgccaactggtaccggatggagttgtggttttctttccaagttacaagtat
atgaatcacatattgtcgatttggaagtctacagatgtattgactcagatagagtcacag
aagaaactctttgaagagcctacaagtgcatcacaagtccagacaattctagcagactat
gcgaacacaattaaagaagagaaaaagggtgcaattctattctcagttgtggggggaaag
atgtcagaagggatcaattttgcagatgaactaggaagagcagtagtgatggtggggtta
ccatatccaaacgcttattctggagaaattatcgccaagaggaaatttatagaatcagaa
gcaattgcaagaggctgctccatgctggaagcacagagaaactcacaaagctattatgaa
aacttgtgtatgagggcagtgaaccaaagtataggaagaagcattagacatatcaacgat
tactcaatcatatatctcgttgattgtcgatatcagtcgtctaggattcagaataaactc
agttcctgggttaggaaaagaatagaaacaaggaactataacatggatcagatcatggaa
gagacaagagacttcttcatgtgcaaaaccattgcgagacttgcctga
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