Scheffersomyces stipitis: PICST_55876
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Entry
PICST_55876 CDS
T01023
Name
(RefSeq) predicted protein
KO
K14845
RAT1-interacting protein
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_55876
03009 Ribosome biogenesis [BR:
pic03009
]
PICST_55876
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PICST_55876
Ribosome biogenesis [BR:
pic03009
]
Eukaryotic type
Pre-60S particles
Other pre-60S particles
PICST_55876
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RAI1
Motif
Other DBs
NCBI-GeneID:
4837555
NCBI-ProteinID:
XP_001382908
JGI:
55876
UniProt:
A3LNL5
Structure
PDB
LinkDB
All DBs
Position
2:complement(738695..739885)
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AA seq
396 aa
AA seq
DB search
MMKTLSLQSRAKTTALKQPKEIFAFARDIDGEFVYDQKIVKDENVSYYYLPDSKIDGSID
LQAGYAKFKKIPEEKNMSDMKCLLTALTKYEQEHNNGEKVNVDIITYRGLMTKLLALPYN
LNDPVDLNVLAYDGQLFINSDEEIELARRKEEDEHKQQSMTPEKYDHMKRCEFSGYKFEA
IATLPKPWADCSRQQIDKRGKKMVNNYEQYISVIKTGIGEAKMLLAGEVDCVWDYIPEDG
KDVLSHYMELKTTRILESNGQVVNFEKKLFKTWAQCFLMGIRKVVYGFRDDSFFLRDVEL
YKTEEIPLLIKNNALTENKSGGKINCTTALKWYGAVIEWLLQEIPRDDTSKAYRVSFDPS
TRTFTLRELMGNENSRLRNGEMLTSEFKQWRESIQK
NT seq
1191 nt
NT seq
+upstream
nt +downstream
nt
atgatgaaaaccttatcgctccagagtagggcaaaaacgactgctctcaagcagcctaaa
gagatttttgcttttgctcgagacatagacggcgaattcgtgtacgaccagaaaatagtc
aaagacgaaaacgtatcgtactactacttgccagactccaagattgatggaagcatcgac
ttgcaagctgggtacgccaaattcaaaaaaatcccagaagagaagaacatgctggatatg
aagtgtttgcttacggcactcacgaagtatgagcaagaacacaacaacggcgaaaaagta
aatgtagatatcatcacataccgagggttaatgactaaattgcttgctttaccatacaac
ttgaacgaccctgtagatctcaatgtactagcctatgatggacaattgtttatcaacagc
gacgaggagatcgaattggcaagaagaaaagaagaagacgagcacaaacaacagagtatg
actccagaaaagtatgatcacatgaagcggtgtgaatttagcggatacaagtttgaagcc
atagccacattgcccaagccctgggccgactgtagtcgtcaacaaatcgataaaagaggc
aagaaaatggtgaacaactacgaacagtatatttcagtaataaagactggcattggtgag
gccaagatgcttttggcaggagaagtggactgtgtgtgggactatattccagaagacgga
aaagatgttctttcacattatatggagttgaagacaactagaatattggagtcgaacggc
caggtggtcaactttgaaaagaagttgttcaagacgtgggcccagtgtttcttgatgggt
atccgtaaagtggtgtacggattccgtgacgattcgttcttcttgcgcgacgtcgagttg
tacaagacggaggagatcccgttgctaatcaagaacaatgcgcttactgagaacaaatcc
gggggaaagatcaactgtaccactgccttgaaatggtatggagcagtcattgaatggctc
ttgcaggagattccaagagacgatacttccaaggcctatcgagtgagttttgatccaagc
acaagaactttcacgttaagagagttgatgggtaatgagaatagtaggttgagaaacggc
gagatgttgacctcggaattcaagcaatggagagaaagcatccaaaagtga
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