Scheffersomyces stipitis: PICST_56107
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Entry
PICST_56107 CDS
T01023
Name
(RefSeq) predicted protein
KO
K22756
E3 SUMO-protein ligase NSE2 [EC:2.3.2.-]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pic04121
]
PICST_56107
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_56107
Ubiquitin system [BR:
pic04121
]
Ubiquitin ligases (E3)
UBL E3 ligases
PICST_56107
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
SMC5-SMC6 complex
PICST_56107
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-Nse
U-box
MMS21_N
PMC2NT
zf-C3HC4
Pox_H7
zf-C3HC4_2
Tweety
Motif
Other DBs
NCBI-GeneID:
4837201
NCBI-ProteinID:
XP_001383161
JGI:
56107
UniProt:
A3LQ12
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Position
2:complement(2058804..2059637)
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AA seq
277 aa
AA seq
DB search
MDSVSNIENFVLPPNVPFQRVLTRDFEFASSFENKVDSDLQELGKSILDITSEYVNYILQ
NDHLKLDEEFIQRNLDSFEQVLRNRFALMEFKDSLQHSKDSIRNNNMNVSELTIEALQEY
QSSTEDLKNFDDVVISHYEERKLSQTSSEFKKFLKSDKNYAYIRSISFIIKNPEDPIPEL
EEDDDDVNISGGKISLKDPLSLNYFVDPVKSSVCNHTYERAFILTHLSSGHSECPINGCR
NAVTRKNLIKDDMMCLRIQVFSKRKTKPEYETAERIE
NT seq
834 nt
NT seq
+upstream
nt +downstream
nt
atggacagtgtctctaacatcgagaacttcgtattgccgccaaatgttccttttcaaaga
gttctcacacgagatttcgaatttgctagcagttttgagaacaaagtagacagtgattta
caggagttgggtaagctgatacttgacataactagcgagtatgtcaattacatcttgcag
aatgaccacttgaagttagacgaggagtttatccaacggaatctcgacagcttcgagcag
gtgcttcgtaatcgcttcgcattgatggaatttaaggattctttgcaacactctaaggat
tcgattcgaaacaacaatatgaatgtgtcagagttgaccatagaggcattacaagagtac
cagtcgagtacagaagacctcaagaatttcgacgatgttgttatttcccattacgaagaa
cgaaaacttctgcagacgtctagcgagttcaaaaagttcttgaagtcagataaaaactac
gcttatataagaagcatatcattcatcattaagaaccccgaggacccgataccagaactc
gaggaggacgacgacgatgtaaatatatccggagggaaaatatcgctcaaagaccctctt
tcgttgaattactttgtagatcccgtaaagtcttcagtctgcaatcacacatatgaaaga
gctttcattcttactcatttgagttcgggccactcagagtgcccgataaatggctgtcgt
aatgcggtaacaaggaagaatttgatcaaggatgacatgatgtgcctcaggatacaggta
tttagtaagaggaagactaaacctgagtacgaaacggcagaaagaattgaatga
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