Scheffersomyces stipitis: PICST_56634
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Entry
PICST_56634 CDS
T01023
Symbol
ATM1
Name
(RefSeq) mitochondrial ABC transporter
KO
K05662
ATP-binding cassette, subfamily B (MDR/TAP), member 7
Organism
pic
Scheffersomyces stipitis
Pathway
pic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PICST_56634 (ATM1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pic02000
]
PICST_56634 (ATM1)
Transporters [BR:
pic02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB6, 7 subgroups
PICST_56634 (ATM1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_21
AAA_29
AAA_16
AAA_22
nSTAND_NTPase5
ATP-synt_ab
ABC_ATPase
AAA_30
AAA_23
nSTAND3
DEAD
NB-ARC
Motif
Other DBs
NCBI-GeneID:
4837693
NCBI-ProteinID:
XP_001383432
JGI:
56634
UniProt:
A3LRL2
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All DBs
Position
3:<788699..>790567
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AA seq
622 aa
AA seq
DB search
MLKSLVATIWPKNKPSFKIRVVIALTLLIGSKLLNVQVPFFFKSIIDEMNVEWSEHLGTV
GTVIGSLILAYGGARFGAVLFGELRNAVFASVAQSAIKRVAYNTFIHLLNIDLQFHLSRQ
TGGLTRAIDRGTKGISYVLSALVFHIVPITFEISVVCGILTYNYGLSFAAVTLATMMAYS
FFTIKTTSWRTGFRRQANNADNQAASVALDSLINYESVKYFNNELYQASKYDSALTKYQN
ASIKVATSLAFLNAGQNLIFTSALTAMMYMGCQGVATGALSVGDLVLINQLVFQLSVPLN
FLGSVYRELKQSLLDMENLFQLQNYDIKIKDAPNAKPLLLNAQGVPGEIKFENVSFGYHP
ERPILKNATFTIPAGQKVAIVGPSGSGKSTILRLVFRFYDVDEGRILIDGQDISKITVES
LRKSLGIVPQETPLFNDTILENIRYGRLDATDEEIEEMIEKVQLTNLIKDLPDGVNTIVG
ERGMMISGGEKQRLAIARLLLKRAPITFFDEATSALDTHTEQSLLRTIRTVFRTKKNTNV
SIAHRLRTIADADKIIVLNKGSVQEEGTHYGLLADQHSLYGQLWNIQENLDLEKHLKDDP
EEVQKLDKLEKELEKEELTKQT
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgctcaagtcacttgtagctaccatctggcccaagaacaaacccagtttcaagatcagg
gtggtgatagcattgacgctattgattggatcgaaattattgaatgtgcaagtgcctttt
ttcttcaagagcatcattgacgaaatgaatgtggaatggtcagagcatttaggaactgta
ggaacagtaattggatctttgattcttgcttatggtggagccagatttggcgctgtactc
tttggtgagttaagaaatgccgtttttgcttcagtagcccaaagtgccatcaagagggta
gcttacaatacgtttattcatctcttgaatatagacctacaattccatttgtccagacag
acaggtggcttgaccagagctatagatcgaggtactaaaggtatcagttatgtattgagt
gctttagttttccacatcgtgccaataacttttgagatttctgttgtctgtgggattttg
acttataattatggattatcatttgctgctgtgactttggctacgatgatggcttactct
ttcttcactatcaagaccacttcgtggagaaccggatttagaagacaagccaacaatgcc
gataaccaagcagcttctgtagccttagactcgttgatcaactatgagtctgtcaaatac
tttaacaacgaactctatcaggccagcaaatacgactcagctttaacaaagtatcagaat
gcttccatcaaagtagccacatcattggcgttcttaaacgctggccagaacttaatcttt
acgagtgccttgacggccatgatgtatatgggatgccaaggtgtagccactggagctctt
agtgttggagatttagtcttgatcaatcagttagttttccagttgagtgtaccattgaac
tttttgggttcagtgtatcgtgaattgaaacagtcgttgctagatatggaaaacttgttc
caattacagaactatgatatcaagatcaaagatgctcctaacgccaaaccattgctttta
aatgctcagggagttcctggtgaaatcaagtttgaaaatgtctcatttggataccatcca
gagagacctatcttgaagaatgcaacgtttactatcccggccggccagaaggttgcaatt
gtaggaccctctggtagtggtaaatcgacgattttgcgtcttgtattcagattctatgat
gttgatgaaggcagaatcttgatagacggtcaagatatcagcaagataactgtcgagtcg
ttgagaaagtccttgggtattgtaccccaggagactcccttgttcaacgatacaatcttg
gagaatatccggtacggtagattggatgctacggacgaggaaatcgaagagatgattgaa
aaggttcaattgacgaacttgatcaaggatttaccagatggtgtcaacactattgttggt
gaaagagggatgatgatttccggaggtgagaagcagcgtcttgccattgccagattgctt
ttgaagcgagctcctatcactttctttgatgaagctacatctgctttggatacccatacc
gagcagtcgttgttgaggaccatccgtacagtcttccgtacaaaaaagaataccaatgtg
tcaattgcccatagattgagaaccattgctgatgctgacaagattatagtgttgaacaag
ggttcggtgcaagaagagggcacacactacggtttattggccgaccagcattcgctttac
ggtcaattgtggaacatccaagagaacctcgaccttgagaagcacttgaaagatgatcca
gaagaggtccagaagttggacaagttggagaaagagttggagaaggaggagctcactaag
cagacatag
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