Scheffersomyces stipitis: PICST_57180
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Entry
PICST_57180 CDS
T01023
Symbol
MTR3
Name
(RefSeq) exosome exoribonuclease
KO
K12587
exosome complex component MTR3
Organism
pic
Scheffersomyces stipitis
Pathway
pic03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PICST_57180 (MTR3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_57180 (MTR3)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Core exosome factors
PICST_57180 (MTR3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
Motif
Other DBs
NCBI-GeneID:
4838218
NCBI-ProteinID:
XP_001383313
JGI:
57180
UniProt:
A3LQW5
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All DBs
Position
3:142502..143386
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AA seq
289 aa
AA seq
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MSDRRRLLGSVNTIIPNVDGTAQPAKIESKTEPRIDGLRPFFLKTGIIENANGSSYLEVG
NNIIEVSVYGPRPIRGSFIDRASFSVECKFLPFISQPNEHLYNNTSISASSAANTTNQTN
VNVNGRTGLTSIEHKISSYIETSLLPSIVLEKYPKSTIDVFVTIISTDSSLGGSYSDTKM
LSLVNWVLNASSVALVDSGIEVKDVVTSGVAHLQNDVLVLDPTEIQEKDEGSVSCVASFM
NLRNDEIVGIWIEGDQTNLENSQVDHLLDGCNDMSKKVRANINSYFTTS
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagaagaagacttttaggttcggtaaatacaattataccgaatgtggatgga
actgcacagcctgcgaagattgagtctaagacagagcctagaatcgatggcttaagacca
ttctttttgaagacaggaatcattgaaaatgccaatggatcgtcatatctagaagtgggc
aataacataatcgaagtgctggtatatggtccacgtccaatcagaggctctttcatcgat
agagcctctttctctgtagagtgtaaatttttgccattcatctcccagcccaacgagcat
ttgtacaacaataccagcattagtgccagctctgctgcaaacaccaccaaccagaccaac
gtcaacgtcaacggccgtaccggcttgaccagcattgaacacaagatctcgtcgtatatt
gagacgtctttgttgccttctatagtgttagaaaagtatcccaagtccaccattgacgtc
tttgtcactataatttcaacagactcttcactaggagggtcatatctggacacaaagatg
ctcagtcttgtcaactgggtgttgaacgcttcttcggtggctttggtcgactcgggaatc
gaagtaaaggacgttgtaacaagtggagtagctcatttgcagaacgatgttctcgttctt
gaccctactgaaattcaagagaaggacgaagggtctgtttcctgtgtagccagtttcatg
aacttacgaaacgacgaaatagtagggatttggatagaaggtgaccagacaaacttggag
aattcgcaggtggaccatttactcgatggctgtaacgatatgtccaagaaggtaagagcc
aatatcaattcctatttcaccacttcttaa
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