Scheffersomyces stipitis: PICST_58607
Help
Entry
PICST_58607 CDS
T01023
Symbol
RPB4
Name
(RefSeq) RNA polymerase II fourth largest subunit
KO
K03012
DNA-directed RNA polymerase II subunit RPB4
Organism
pic
Scheffersomyces stipitis
Pathway
pic03020
RNA polymerase
pic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PICST_58607 (RPB4)
09124 Replication and repair
03420 Nucleotide excision repair
PICST_58607 (RPB4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_58607 (RPB4)
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_58607 (RPB4)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
PICST_58607 (RPB4)
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PICST_58607 (RPB4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb4
NPA
GCV_T
DUF4642
Motif
Other DBs
NCBI-GeneID:
4838739
NCBI-ProteinID:
XP_001384230
JGI:
58607
UniProt:
A3LU87
LinkDB
All DBs
Position
4:1417284..1417856
Genome browser
AA seq
190 aa
AA seq
DB search
MNVSTSALGVRRRKAATQNIDDEENAALLKLGPEFQLTQITNSGEQEQLIALNLSEARLL
IRAALKERRNKNAKKTEYDEDDENDKEDEISNMDLAGPNSNEIMHKTLNYLTNFARFKNS
SSTETVEKLLNDFSLSASEPLHPFELAQLGTLECEDAEEAKSLIPSLIHKVSDVQLQTLL
TELRKYQTLS
NT seq
573 nt
NT seq
+upstream
nt +downstream
nt
atgaatgtcagcacaagtgccttgggtgtcagaagaagaaaggctgccacccaaaatata
gatgatgaagaaaatgccgcattattgaaattgggccccgaattccaactcacgcagatt
acaaacagtggagaacaagaacagttgattgcccttaacttgtcagaggccagattgttg
ataagagcagccttaaaggaacgtagaaacaaaaatgcaaagaagacagagtacgacgaa
gacgacgaaaatgataaagaggatgagatttctaacatggatttggcgggccccaactcc
aacgaaatcatgcacaagacgttgaactatttaaccaatttcgccagattcaagaattct
tcctccacggaaactgtagaaaagttgttaaacgacttcagccttctggcctccgagcct
ttgcatcctttcgagttggcccagttgggtacattagagtgtgaagatgccgaggaagcc
aagtcgttgattcccagtcttatccacaaggtgtctgacgtacagttgcaaactttgctt
accgagctcagaaagtaccagaccttgtcatag
DBGET
integrated database retrieval system
