Scheffersomyces stipitis: PICST_59143
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Entry
PICST_59143 CDS
T01023
Symbol
CDR4.2
Name
(RefSeq) ABC transporter
KO
K08711
ATP-binding cassette, subfamily G (WHITE), member 2, PDR
Organism
pic
Scheffersomyces stipitis
Pathway
pic02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
PICST_59143 (CDR4.2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pic02000
]
PICST_59143 (CDR4.2)
Transporters [BR:
pic02000
]
ABC transporters, eukaryotic type
ABCG (White) subfamily
ABCG2, 3 subgroups
PICST_59143 (CDR4.2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
PDR_CDR
ABC_trans_N
ABC2_membrane_7
RsgA_GTPase
ABC2_membrane_3
AAA_25
AAA_23
AAA_22
SMC_N
AAA_28
AAA_18
ABC_ATPase
AAA_29
AAA_30
MMR_HSR1
AAA_16
NACHT
TsaE
NTPase_1
cobW
Occludin_ELL
DUF6341
Motif
Other DBs
NCBI-GeneID:
4838764
NCBI-ProteinID:
XP_001384655
JGI:
59143
UniProt:
A3LUN9
LinkDB
All DBs
Position
4:complement(1788626..1793056)
Genome browser
AA seq
1476 aa
AA seq
DB search
MSTPTMTDDSSQEAHASDRTEFNQYDGFNQVVENEIRELARNPSRISVDTASLHSSSLAL
VRTLTNASQIPGQNPMVENSSEYIDPRLDPCSEQFDSKFWVQNLRKLVLSDAEYYKPASL
GLAYKNLRAYGLDVDTDYQTTFGNGIFKMLNRYARRITGKESSYDILKPMDGILLPGELT
VVLGRPGAGCTTLLKTLSTQTYGFQVDKESIISYDGFTPSDIKKHYRGDVVYCSETEKHF
PHLTVWDTLYLAAKLRTPQNRPLGVSRELYANHMTEVVLATYGLTNTKYTKVGDDFVRGV
SGGERKRVSIAEVALNSALIQCWDNSTRGLDAATALEFVRALKASAQVSKATPLVAIYQC
SQDGYDLFDKVILMYEGYQIFFGNAKKAKQYFIDMGYECPQRQTTADFLTSLTNPAERIP
RKGYEAQVPRTPEEFYNYWQKSPQRQELLSQIDSYLNEHLESNSRSEFHESHIAKQARHT
NPGSSYTVSFLMQVRYVVERNILRTKGDPSFMLFQIGGNIFIAFILCSIFYNLQPTTESF
YSRTAAMFFAILFNANSSMLEIFSLYEARSVVEKHKTYALYHPAADAIGSIITELPTKII
TCIGFNLVYYFMIHFRREPGHFFFYLLVNFTATLAMSHLFRSIGASTKTMSQAMTPSVIL
LLAFVIFTGFIIPTPDMHGWCRWINYINPIAYAFEALIANEFHDRDFICSRFVPSGGSYP
VDGPYRICSVVGSVVGENYVNGDAFINESFKYYDGHKWRNWGIVLAFAIFFMFTYVLICE
YNRGSRQKGEVLLFQKRLSKRKMDMEMGKMVKYTHEFSSDSSFEKNSKHEYSGNIFHWRH
LSYSVKIKSENRIILDDIDGWVKPGQITALMGATGAGKTTLLNAISDRLTAGVVTDGVRM
VNGRPLDADFQRSVGYVQQQDLHLETSTVKEALKFSAYLRQPYAVSKKEKDEYVDYVINL
LDMESYSDAVVGISGEGLNVEQRKRLSIGVELVAKPKLLLFLDEPTSGLDSQTAWSICKL
IRKLADSGQAIVCTIHQPSAILLKEFDRLLFLQKGGQTVYFGDLGDYFNTLIQYFEKHGA
HKCPPEANPAEWMLEVIGAAPGSHSKKDYAKVWKDSEEYKQIQRELDEMERELVKLPVND
DPEKLKTFTNPMWKQYVLVTERVLQQYWRTPSYTYNKVTLSVLSSLFNGFAFFKADRSLQ
GLQNQMFSVFMFLVNLMTLVQQYLPHFVAQRDLYEVRERPSRTFSWFAFIAAQITSEVPW
NIFCGTLSFLSWYYPVGFYQNAVETNTVHQRGGYMWFAIVMFYVYSSTMGQMCMSFMELA
DNATNLCIIMYSMCLGFCGVLVTKQNLPGFWIFMYRANPFTYLVSVILSTGLFDTKVTCS
PTEILNIPVPQGYTCEQFMGPYMSVAGGYLQSNGGQCQFCTMANTNVFLNSINADYYTRY
RDMGLFVAFIGINVICTVFFYWLARVPKFNRRGTKT
NT seq
4431 nt
NT seq
+upstream
nt +downstream
nt
atgtctacacctacaatgaccgacgatagctcgcaagaggcgcatgcttccgatagaact
gaattcaatcaatatgatggtttcaatcaggtggtcgagaacgagataagggaactagca
agaaatccaagcaggatatctgtggacactgcaagtttacactcctccagcttggctttg
gtcagaactttaacaaacgcttcacaaataccaggacagaatccaatggttgagaattca
tctgagtacattgatccaagacttgatccctgctccgaacaattcgattccaaattctgg
gtccagaatttaagaaaacttgttctatcagatgctgaatactacaaaccagcttctttg
ggactagcgtacaagaatcttagagcttacggtcttgatgtcgataccgattatcaaact
acatttggcaatggtatctttaaaatgctcaatagatatgccagacgaataactggaaaa
gagtcttcttatgacattctcaagcctatggatgggattcttttacctggcgaattaact
gttgtgcttggtagaccaggtgccggttgtacaacacttttgaaaacgctttcaacacaa
acatatggtttccaagttgataaggaaagtataatcctgtacgacggtttcaccccatca
gacatcaagaaacactatcgtggagacgtcgtttattgttcagaaacagaaaaacatttt
ccacacttgacagtttgggatactctatacttggccgctaagttgagaacgccacaaaac
aggccactaggtgtatcgagggaactatatgcaaaccacatgacagaagttgttttggca
acttacggtttgactaatacgaagtatactaaagttggtgatgattttgtgaggggtgta
tctggaggggaaagaaaaagagtttccattgccgaagttgctttgaatctggcattgatt
caatgttgggataattccactagaggcttggatgctgcaacagcgttggaatttgttaga
gctttgaaagcatcagctcaagtttccaaagcaacgccccttgttgcaatttaccaatgt
tctcaggatggttatgacttatttgataaggtgatattgatgtacgaaggctatcaaatt
ttcttcggtaacgccaaaaaggcaaaacagtatttcatagacatgggttatgagtgtccc
caaaggcaaactacggcagactttttgacttctttgactaatcctgctgagaggattcca
aggaagggttatgaagcacaagttccacgtactcctgaagaattctataattattggcag
aagtcacctcaaaggcaagaattattatctcaaattgatagctacttgaatgagcatctt
gagtctaattccaggagtgagtttcatgagtctcatatcgcaaagcaagcaaggcacact
aatcctggatcatcttatactgtgtcattcttaatgcaagtaaggtatgttgtcgaaaga
aatatattaagaaccaagggtgatccctcattcatgcttttccaaattggaggtaacata
ttcatagcatttattttgtgttccatcttctacaatcttcaacccaccacagaatcattc
tacagcagaacggctgctatgttttttgcaattttgttcaatgctaactcatcaatgtta
gaaatattttctctttatgaggccagaagcgttgtcgaaaagcacaagacatatgcatta
tatcatcctgctgccgatgcgattggttctataataacagaacttccaaccaaaattatc
acttgtattgggtttaacttggtttactacttcatgatccactttagaagagaaccagga
catttctttttctatttgctagtgaacttcactgcaacactcgcgatgtctcacttattc
agaagcattggagcttcgactaaaacaatgtctcaagctatgaccccttcagttattcta
ttgcttgcttttgtcatctttaccggttttatcattccaactccagatatgcatggttgg
tgcagatggatcaattacattaatccgattgcatatgcttttgaggctttgattgctaat
gaatttcatgacagggatttcatatgctctcgatttgtaccttctggtggtagctaccca
gttgatggtccatatcggatttgcagtgtcgttggatctgtcgttggtgaaaattatgtg
aatggggatgccttcatcaacgagtctttcaagtattatgatggtcacaaatggagaaat
tggggaattgttcttgcatttgcaattttctttatgttcacttatgttcttatttgtgag
tataataggggatcaaggcagaaaggagaagtacttctattccagaaacgtttatcaaaa
agaaagatggatatggagatgggaaaaatggtgaagtatacccatgagttcagcagtgat
tcgagttttgagaaaaattcaaaacatgaatacagtggtaatatattccattggagacat
ttatcatactcagtgaaaattaaatctgaaaataggatcattttggatgatatagatggc
tgggttaagcctggacagataactgctttgatgggagcgacaggtgctggtaaaactaca
cttttgaatgcgatatctgatagattgactgctggagttgtcactgatggtgtaagaatg
gtaaacggaagaccattggatgccgatttccagagatctgttggttacgtccaacaacaa
gatctacatttggagacatccaccgtgaaagaagctttaaaattttcagcttatttgaga
cagccatatgctgtatccaaaaaggagaaagatgaatatgtcgactacgtcattaatctt
ttggatatggaactgtattcagacgcagttgttggtatatctggcgaaggccttaatgtc
gagcaaagaaagagactttcaattggtgtcgagttagttgccaaaccaaaattattgcta
tttctagatgaacctacctctggattagattcacaaacagcttggtctatttgcaagttg
attagaaaattggcagatagtggtcaggctattgtttgtactatccatcaaccttcagcc
atattattgaaagaatttgatcgtttacttttcttacaaaaaggtggccaaacagtatat
tttggtgatttgggggactattttaatactttgattcaatacttcgaaaaacacggtgct
cataaatgtcctccggaagctaatccagctgagtggatgttggaagtaattggtgcagca
cctggttctcattcaaagaaagactatgccaaggtttggaaagattcagaagagtataaa
cagatacagagagagttagatgaaatggaaagagagcttgtaaagctaccagttaatgat
gatccagaaaagttgaaaacatttacaaatccaatgtggaaacaatatgttttagttact
gaaagagtccttcaacagtattggcgaacaccaagttatacttataataaggttacctta
tctgtactctcctccttatttaatggttttgctttcttcaaggcagacagatcacttcaa
ggacttcaaaatcaaatgttttcggttttcatgtttttggtcaatttgatgacgttagta
caacagtatttgcctcattttgttgctcaaagagatctatatgaagtcagagaaagacca
tcaagaactttcagctggtttgcttttattgctgcccagataacatctgaggttccatgg
aatattttctgtggtaccttatcctttctttcttggtattatccagtagggttttaccag
aatgccgttgagaccaatacagtccatcaacgtggtggatatatgtggtttgctattgtt
atgttctacgtttactcctcaactatgggccagatgtgtatgtcattcatggaactagca
gataacgcaaccaacttgtgcatcatcatgtacagtatgtgtcttggtttctgtggtgtg
ttggttactaaacagaatttgcctggattttggatattcatgtacagagcaaatccattc
acttacttagtttctgtcattttgtcaaccgggttatttgataccaaagttacttgctct
cctacagagattctcaacattcctgttcctcagggttatacatgtgagcaatttatggga
ccatacatgagtgttgcaggtggatatttgcaaagcaatggcgggcaatgtcaattctgc
accatggctaacaccaatgtattcctcaacctgataaatgctgattactatacgagatac
agagatatgggcctttttgttgcatttattggtattaatgttatttgcacagttttcttt
tactggcttgccagagtcccaaaattcaacagaagaggaactaagacttag
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integrated database retrieval system
