Scheffersomyces stipitis: PICST_59359
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Entry
PICST_59359 CDS
T01023
Symbol
POP4
Name
(RefSeq) rRNA and tRNA processing
KO
K03538
ribonuclease P protein subunit POP4 [EC:
3.1.26.5
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PICST_59359 (POP4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pic03009
]
PICST_59359 (POP4)
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_59359 (POP4)
03029 Mitochondrial biogenesis [BR:
pic03029
]
PICST_59359 (POP4)
Enzymes [BR:
pic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.5 ribonuclease P
PICST_59359 (POP4)
Ribosome biogenesis [BR:
pic03009
]
Eukaryotic type
Pre-60S particles
RNases
RNase MRP
PICST_59359 (POP4)
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
5'processing factors
Ribonucrease P
PICST_59359 (POP4)
Mitochondrial biogenesis [BR:
pic03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
RNase MRP
PICST_59359 (POP4)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_P-MRP_p29
Phlebovirus_NSM
Motif
Other DBs
NCBI-GeneID:
4838427
NCBI-ProteinID:
XP_001384078
JGI:
59359
UniProt:
A3LTC7
LinkDB
All DBs
Position
4:<600917..>601846
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AA seq
309 aa
AA seq
DB search
MSSPLSFHNQHNSMEKRNILEKHLLSRCYDSESIIEQLLDTRYSHGGDQKPVIVFKKTFP
EKEKQKSILHREISDKSQTITKSRKHNARLQLRNYIKQTTSNQKKLVHKIQKHNRECIAK
SQQIPFPIEAMLKRYRIPRYEDFNNLSHLWQSYMGDLLFSNGTIPTMSVLLPKLSSADYT
GCLLTVTQSRNTNMVGTRGIVVVDAQFSFILCVPRSELSKEWNESKESFTPSEMVGGFRM
VPKKGTLFSFDVIVPKKISIEEGNENNAADSDDHDDECVGFTLIGSRFEFRAVDRAGKKF
KSHTVDDIL
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgagttcacctctttcattccacaaccagcacaattccatggagaaacgaaatattttg
gagaaacatcttctcctgcgttgctatgactctgaaagtataattgagcaacttttggac
acccgttactcccacggtggagaccagaaacctgtcatagtgttcaagaagactttccca
gagaaagagaaacagaagtctatactacaccgagaaatttcagacaagtcccagaccatt
accaaactgagaaaacacaatgctcgccttcaactcagaaactacatcaaacagaccaca
agcaatcaaaagaagcttgtccacaagatccagaaacataatcgagaatgtatagccaaa
tctcaacagattccgtttcccattgaagccatgttgaaacgctatagaatacctagatac
gaagactttaacaacctcagccacttgtggcagtcatatatgggcgacttgttgtttagt
aatggaaccatacccactatgtctgttttacttccaaaattgctgagtgctgactacaca
ggttgtctattaactgttacgcaatctcgtaatacaaatatggtgggaaccagaggcatc
gtagtagtagatgcacaattttcgtttattttatgtgttccacgtagcgaattgtccaag
gaatggaacgagtctaaagagagtttcactccgtcagaaatggtgggtggcttcagaatg
gttcccaagaaaggaacccttttttctttcgatgtaatagtaccgaaaaagatatccatt
gaagaaggaaatgaaaataatgcagctgatagtgatgatcatgatgacgaatgcgttggg
ttcaccttgatagggtcaaggttcgaattccgtgctgtagatagagcaggtaagaagttc
aagagtcatactgtggatgacattttatag
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