Scheffersomyces stipitis: PICST_60150
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Entry
PICST_60150 CDS
T01023
Symbol
RPO32
Name
(RefSeq) mitohcondrial RNA polymerase
KO
K10908
DNA-directed RNA polymerase, mitochondrial [EC:
2.7.7.6
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03029 Mitochondrial biogenesis [BR:
pic03029
]
PICST_60150 (RPO32)
Enzymes [BR:
pic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PICST_60150 (RPO32)
Mitochondrial biogenesis [BR:
pic03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial transcription and translation factors
Mitochondrial RNA polymerase
PICST_60150 (RPO32)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol
RPOL_N
DUF6730
Motif
Other DBs
NCBI-GeneID:
4839434
NCBI-ProteinID:
XP_001385284
JGI:
60150
UniProt:
A3LWB9
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Position
5:complement(1468481..1472173)
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AA seq
1202 aa
AA seq
DB search
RTPNIHTSILINSFFQSVMQNDFNRSRKLLEKLRNKINTPDVKMASIHRVNYYSCFSLLL
SNLISQGKVHIQNIKLLVDEATNEMNQLRTEIRSKLVLCVVNSLDDGVKYGGIYQQSIAK
YAGALIKNFHIKPSQLAQEITKKETLDKLNRICAINSLTPKELPWVERVTSAIDNFKDDN
GYVSLENLCRYIGYTRFANYDSNDSHKLKMFEIYDSLSTEKERADFIDNYLDFNKTREMI
LESNCLDLVENFDSIHLSKSRELQSIGHFKLIHSKMIYSWFESNVKELQRLKSKLKTVSV
TTNLNEQEKILTKYLTYLELIPERALVTLFLSNMLSMTISSKEGGVKVVTLTKSLLSLFT
RLLMKDKSFTNVKKTLLEFFNDKNDAARLIGALIDIFIHNCKFKIPPQQFEEFVQAQQLL
RQYVEGDYKKDSHDNFDSFHSTLVPLEGKKTVGILRIHSYLYQQFKIYDSLAFNKSLYFP
MLYPPKPWVSPTNGGYLLDLKPIITSSDIKTSMKYIDRANSSGQLNSTYEALNYLGSNAW
AINSEVLQVFNEVMKLDEGFLKIPPTLKVLKTEEQEDYNDLKTKRILFNLVHVVANSYDV
NGDMLFLPHNVDFRGRAYPMASLLTHYQEDAVRGIMMFWHSQPLGSTGLNWLKYQLAGVF
GKDKLSFENRIQFVDENLESIRESAENPLSKNSWWKEADKPWQTLALCIELNRAYNYVEQ
GNKIEEFRSRMPVHQDGSCNGLQHYAALGADTAGGEAVNIVPNKENLSQRGDVYSSVLQI
VIEKVQKDLTGEGNSDSSNSNFELSSIAMQILNRKLIKQTVMTTVYGVTTYGGASQIYLR
IKDLIQEHEIKLHNDEKIDLEFLEKLRRYRRPLSLYLSKYVLNSISELFSGARIIQDWLV
DNCFRAINSFDLETVDFIRHKSTTNNIPSFSSHTSFKPMMWTSLSGFPIVQLYKHSKSDV
IPTSLQSISINKPQEIAPINKKKQMNAIAPNFIHSIDSIHMLMTCVAAKKANIPFVSVHD
SFWTYPNHVDELSVLLREEFVRLHSSNIAENLREDLLYTMSKSFQLVWVYRAENAQLVDE
IKELRKTYDISSYGGGTKIDKILYHELRQMTNDNSTGDKPFNRESTQSVQKILDKHNPTL
YFRSRYNPKLVQQYDSSLESKLTKTFNRKEFTPVLVPVSILNCPPTGELDLSEVMKSRYF
FS
NT seq
3609 nt
NT seq
+upstream
nt +downstream
nt
cgaactccgaatattcataccagtatacttatcaatagctttttccagtcagtgatgcag
aatgactttaatcggtcaagaaagcttcttgaaaagttacgaaataagataaatactcca
gatgtcaagatggcatcaatacatagagtgaattattactcttgctttctgcttttacta
tccaatctcatttctcaaggaaaggtccatatccagaatattaagttactcgttgacgaa
gcaactaatgagatgaaccaattacgcacagagatacgctccaaactagttctatgtgtt
gtaaatagccttgatgatggagtaaagtatggcgggatatatcagcaatctattgctaag
tatgctggggctctaataaagaatttccatatcaaaccatctcagctagcccaggaaatc
acgaagaaggagacgctagataagttgaatagaatttgtgcgattaactccttaacaccc
aaggaattgccttgggtagaaagagttacaagtgccattgacaatttcaaagatgacaat
ggatatgtcagtctagagaatctctgtagatatattggttacacaagatttgccaactat
gacagtaacgactctcacaagttgaaaatgtttgaaatctatgattctctttcgacagag
aaagagagagccgatttcatcgacaactatttggatttcaacaaaaccagagaaatgata
cttgaatcaaactgtcttgatttggtagaaaactttgattccatacatctttctaaaagt
agagaattacagagtattggacacttcaagcttattcattccaaaatgatctattcgtgg
tttgaatccaatgttaaggaattacaaagactaaagagcaaactcaagaccgtttctgtt
actactaaccttaatgaacaagaaaaaatacttactaaatacctcacgtatctcgaactt
attcccgagagagctttagtgacattatttctttccaatatgctctcaatgacaatctct
tctaaagaaggtggagtcaaagtagttaccttaacaaaatccttgttatctttattcact
cgattgctaatgaaagacaaatcatttacgaatgtaaagaagacacttttagaatttttc
aatgacaaaaatgatgctgcaagactcattggagccttgatcgacatattcattcacaat
tgcaagttcaaaatccctccacagcaattcgaggaattcgtgcaagcacagcaacttctt
cgtcaatatgtggaaggtgactataagaaagattcccatgataatttcgattcgtttcat
tccacattagttcccttagaaggaaagaaaactgtggggatattaagaattcacctgtac
ttgtatcaacagttcaagatttacgattctctcgcattcaataaatctttatattttcca
atgttgtaccctcccaagccatgggtatctcctaccaatggtggatacttgcttgatttg
aagccaataatcacttcttcggacattaagacatcaatgaaatatattgatagggccaac
tcttcgggacaattaaattcaacctacgaagcactcaattacctaggaagtaatgcctgg
gcaatcaactcagaagtgctccaagtattcaatgaagttatgaaactagacgaaggattt
cttaaaattccgcccactttaaaggtactaaaaacagaagaacaagaagactataatgac
ctcaagactaaacggatattgttcaacttggttcacgttgttgctaatagctacgatgta
aacggagacatgctcttcttgccacataatgtcgacttccggggccgcgcctatcctatg
gcttctctattaactcattatcaagaagacgccgtgcgaggtataatgatgttttggcat
agtcaacctttgggttctacaggtcttaattggctaaagtaccaacttgctggagtgttt
ggaaaggacaagttgtcatttgaaaatagaattcagtttgtggatgagaatttggaatct
ataagagaatcagctgaaaatcccttgagcaagaatctgtggtggaaggaagcagataaa
ccgtggcagacattggcactttgtattgagttgaatcgagcatataattacgttgaacaa
ggtaataaaatagaagagttcaggagccggatgccagttcatcaggatggatcgtgtaac
ggtctacaacattatgctgcattaggtgcagatacagcaggtggtgaagcagtcaatatt
gttcccaataaagaaaacttactgcaaagaggagacgtctatagttctgttcttcaaatt
gtgatagaaaaggtccaaaaggatctcacaggagaaggtaatagtgatagtagcaatagc
aattttgaactatcttcaatagctatgcagattctcaacagaaagttgattaagcagact
gtgatgactactgtttatggtgtaactacatatggtggagcttcacagatctacctccga
atcaaggacttgattcaggagcacgaaattaagctccacaacgatgaaaaaattgatttg
gaattccttgagaaattaagaagataccgccggcccctttccttgtatctatcgaagtac
gttttgaattcaatttctgagttatttagtggtgccagaataattcaagattggttggtt
gacaattgcttcagggctatcaactcatttgatttggaaactgtagactttatccgacac
aagagtacaaccaataatataccatcattctcgagccatacttcattcaagccaatgatg
tggacctccctctctggatttcccattgtgcaattatacaagcatagcaaactggatgtg
attccaacgtctttgcaactgatatccattaacaagccacaagaaatcgctccaatcaac
aagaaaaagcagatgaatgccattgcaccaaacttcatacactcaattgactccattcat
atgctcatgacgtgtgtggcggcgaagaaagccaatatcccgtttgtttcagtgcatgat
tcgttctggacatatccaaaccacgttgatgagctttccgtactattaagagaagaattc
gtaagactccattcatctaatatcgcagagaatctacgtgaagatttgctatacacaatg
tctaagtcgttccagttggtctgggtgtatagagcagagaatgcacaattagttgatgaa
ataaaggaactaagaaagacttacgatatttcttcatatggtggaggaacaaagatagat
aagatcctttatcatgaactcaggcaaatgacaaatgacaattcaactggagacaaacct
tttaatcgtgaatcaactcaaagtgtccaaaaaatcttagacaagcataatcctacgtta
tattttagatcaaggtataaccccaaactcgttcaacagtacgattcatctttggagctg
aaacttaccaaaacatttaacaggaaagaattcacccctgttctagttccagtatccatt
ttgaattgcccaccaacaggagaactcgatctctctgaagtaatgaagagcagatatttc
ttctcctaa
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