KEGG   Scheffersomyces stipitis: PICST_60166
Entry
PICST_60166       CDS       T01023                                 
Name
(RefSeq) DNA repair protein
  KO
K10848  DNA excision repair protein ERCC-4 [EC:3.1.-.-]
Organism
pic  Scheffersomyces stipitis
Pathway
pic03420  Nucleotide excision repair
pic03460  Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    PICST_60166
   03460 Fanconi anemia pathway
    PICST_60166
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pic03032]
    PICST_60166
   03400 DNA repair and recombination proteins [BR:pic03400]
    PICST_60166
DNA replication proteins [BR:pic03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    PICST_60166
DNA repair and recombination proteins [BR:pic03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     PICST_60166
SSDB
Motif
Pfam: ERCC4
Other DBs
NCBI-GeneID: 4839443
NCBI-ProteinID: XP_001385266
JGI: 60166
UniProt: A3LW79
LinkDB
Position
5:complement(1358978..1360672)
AA seq 564 aa
MKHSVGSDSEEYLLEELPKWHELGNMLDDIFHEKSLSSENSGPILIMCSDTRTARQLYQV
IESMKEIKVSGKKYFSSRRFMISKLHEYLQWKEINNLSKQLNEDLEKSEDQTEEQIITSK
SFTRNGQPASKRRRTRGASSTARVAKLYSGENRGAVDIDENVLGQMDQEIVESEEDDVVE
TGPTGLFVETEDIIVPSLSHINMGDQVIIQVYDEGRNDALLQEISPSYIIMYEPNLSFIR
RTEIFQAINRDQPAKVFVMFYSNSTEEQKYLLRLKKEKDAFTKLIREKASLSKHFETSED
NYKFQIQRNQTMNTRIAGGASFRTTDEMRIVVDSREFGASLPNLLYRIGIKVVPCMLTVG
DYVISPKICVERKAIPDLVSSFKSGRLFTQCSQMFKHYETPTLLIEFDENKSFSLQQYAD
SRFLKGRAETANDSPINQSLQSKIMELLVAYPKLKIIWSSSPYETAQIFMSLKANQEEPD
VESALNKGVSKEVITEDGGPPNFNDDPIDFIQNIPGINDMNYYKIIQNVRNLEELVQLSK
EQFVKLLGKENGKKAYNFINHRIK
NT seq 1695 nt   +upstreamnt  +downstreamnt
atgaaacacagcgtaggctcagattctgaagagtatcttcttgaagaattgcctaagtgg
cacgaacttggaaacatgttggatgacatattccacgagaagtcactatcatcagagaat
ctgggtcctatactcattatgtgctcggatactcgtacagctcgtcagttgtaccaggtg
atagaatcaatgaaagagattaaagtaagcggtaagaaatacttcagttccagaagattt
atgattctgaagttgcatgagtatctccaatggaaggagatcaacaacttgtctaaacag
cttaacgaagatttggagaaatctgaagaccagaccgaagaacagattattacgtctaaa
tcatttaccagaaatggacaaccagctagcaaaagacgaagaactcgtggagcttcttcc
acagcaagagttgccaaactatactccggggaaaacagaggggctgtcgatattgatgaa
aatgtattaggtcaaatggaccaagaaatcgtagagtcagaggaagacgatgtcgtggaa
acaggacctactggtttatttgtcgaaactgaagacatcatcgtgccttcgttaagtcat
atcaatatgggtgatcaggtaataatccaagtctacgacgaaggcagaaacgatgcttta
cttcaggaaatttcgccttcatacataataatgtatgaaccaaacttgtcattcatacgg
cgtacagaaatctttcaagccataaacagggaccagcctgcgaaggtctttgtaatgttt
tacagcaactccacagaagaacaaaagtatttgcttcgattgaagaaggagaaagatgca
tttactaagttaatcagagaaaaggcatcgttgagtaaacatttcgagacgagtgaagat
aactataaattccaaattcagagaaatcaaacgatgaacactaggatagcaggaggggct
tcgttcagaacgaccgatgaaatgagaatcgtcgtggactcaagagaatttggtgctctg
ctaccaaatttgttgtacagaattggaatcaaagttgttccatgtatgcttacagttggc
gattatgtcatttctcctaagatttgcgtagagagaaaggcaattccagatttggtttct
agttttaaatctggaagattatttactcagtgttctcagatgttcaagcattatgagaca
cctacgttgctaatcgaattcgacgagaacaagtcattttctttgcagcagtacgctgat
tcccggtttttaaaaggaagagcagaaacagccaacgattcgcccatcaaccaactgttg
cagtctaagattatggagttgttggttgcatatcccaagttgaaaatcatatggtcgtct
tctccgtatgagacagcacagatattcatgtcgttgaaagccaatcaggaggagccagat
gtagaatcagctttgaataaaggtgtcagcaaagaagtcataactgaagatggagggcca
ccaaactttaatgacgacccgatcgacttcatacaaaacatcccaggcataaacgatatg
aattactataagattatccaaaatgtcaggaatttagaagagttggttcagctctcaaag
gagcagtttgtgaagttgcttggaaaagaaaacggaaagaaggcttataactttatcaac
catagaattaagtag

DBGET integrated database retrieval system