KEGG   Scheffersomyces stipitis: PICST_60303
Entry
PICST_60303       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
pic  Scheffersomyces stipitis
Pathway
pic03250  Viral life cycle - HIV-1
pic03272  Virion - Hepatitis viruses
pic04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    PICST_60303
   03272 Virion - Hepatitis viruses
    PICST_60303
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    PICST_60303
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:pic04131]
    PICST_60303
   03400 DNA repair and recombination proteins [BR:pic03400]
    PICST_60303
Membrane trafficking [BR:pic04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    PICST_60303
DNA repair and recombination proteins [BR:pic03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    PICST_60303
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_5 RNA_helicase AAA_16 AAA_22 DUF815 RuvB_N AAA_14 IstB_IS21 TIP49 AAA_18 AAA_33 NPHP3_N AAA_17 AAA_2 nSTAND3 PhoH Mg_chelatase AAA_28 AAA_24 AAA_7 Parvo_NS1 Torsin bpMoxR DUF7669
Other DBs
NCBI-GeneID: 4839082
NCBI-ProteinID: XP_001384798
JGI: 60303
UniProt: A3LVF1
LinkDB
Position
5:695996..697297
AA seq 433 aa
MSGSADFLSKGIDLVQKAIDADTATRYEEAYKLYYNGLEYLMLAIKYEKNQKSKELVKSK
FTEYLTRAEQLKDHLEKQSNKSNSAESSSTNGSTKAKKSGDGDDDDADTKKLRGALAGAI
LSEKPNVKWEDIAGLDAAKEALKEAVILPVKFPQLFVGNRKPTSGILLFGPPGTGKSYLA
KAVATEANSTFFSVSSSDLVSKWMGESERLVKQLFTMARENKPAIIFIDEVDALCGPRGE
GESEASRRIKTELLVQMNGVGNDSSGVLVLGATNIPWQLDAAIRRRFERRIYIALPEVEA
RTRMFEINIGGVPCECTPQDYKALAEMTDGYSGHDVAVVVRDALMQPIRKIQQATHFKSV
LDDDGNEKLTPCSPGDDGAREMNWMDIGTDELKEPPLTIKDFIKSIKSNRPTVNEADIQN
HIKFTEDFGQEGN
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgagtggctctgccgatttcttatcgaagggaatagacttagtccagaaggctatcgat
gccgacactgccacccgctatgaggaagcttacaaactctactacaacggcttggagtac
ttgatgttggctatcaaatacgagaagaatcagaagtccaaggaactcgtcaagtccaag
ttcactgagtacttgactagagctgaacagttgaaagatcacttggaaaagcaactgaac
aagtcaaactctgccgaaagctcatcaacgaacggatctacaaaggcaaagaagagtggc
gacggtgacgatgacgatgccgatactaagaagttgagaggagctttagctggtgccatt
ttgtcagagaagcccaatgtcaaatgggaggatattgctggattggacgcagccaaggag
gcgttgaaggaagccgtgattttaccggtcaagttcccccaattattcgtcgggaacaga
aagcctacgtccggtatcttgttgtttgggcctccaggtacgggtaagtcatatttggcc
aaggctgtggccaccgaagccaactctactttcttctcagtttcatcgtctgatttggta
tccaaatggatgggtgaatccgaaagattagtcaagcagttgtttacaatggccagagaa
aacaagccggccattatcttcatcgatgaagttgatgctttgtgtggtcccaggggagaa
ggagaaagtgaagcgctgaggagaataaagacagaactattggttcagatgaacggggtt
ggaaacgattctagtggtgtgttagtcttgggagcaaccaatattccatggcaattggac
gccgccatcagaagaagattcgaaagaagaatctatattgctttgccagaagtagaggcc
aggactaggatgtttgaaatcaatatcggtggtgttccttgtgaatgtactcctcaggac
tacaaggccttggccgagatgactgatggatactctggacacgatgtggccgttgtagta
agagacgcattaatgcagcctattagaaaaatccagcaagcaacccacttcaagctggta
ttagatgacgacgggaatgaaaagttgactccttgttctccaggagatgatggcgcaaga
gaaatgaactggatggatattggaacagacgaattaaaggaacctccattgacaattaaa
gacttcatcaaatccataaagagtaatagacctactgtcaatgaagccgatattcaaaac
cacattaaattcaccgaagattttggtcaagaaggaaactga

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