Scheffersomyces stipitis: PICST_60537
Help
Entry
PICST_60537 CDS
T01023
Symbol
RCF3
Name
(RefSeq) DNA replication factor C
KO
K10756
replication factor C subunit 3/5
Organism
pic
Scheffersomyces stipitis
Pathway
pic03030
DNA replication
pic03410
Base excision repair
pic03420
Nucleotide excision repair
pic03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PICST_60537 (RCF3)
03410 Base excision repair
PICST_60537 (RCF3)
03420 Nucleotide excision repair
PICST_60537 (RCF3)
03430 Mismatch repair
PICST_60537 (RCF3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pic03032
]
PICST_60537 (RCF3)
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_60537 (RCF3)
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_60537 (RCF3)
DNA replication proteins [BR:
pic03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
PICST_60537 (RCF3)
DNA Replication Termination Factors
ELG1-RFC complex
PICST_60537 (RCF3)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
PICST_60537 (RCF3)
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
PICST_60537 (RCF3)
Check point factors
HRAD17(Rad24)-RFC complex
PICST_60537 (RCF3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
AAA_lid_RFC1
AAA_assoc_2
RuvB_N
ResIII
AAA_11
AAA_14
AAA_22
AAA_30
DUF815
Rad17
RCF1-5-like_lid
AAA_16
AAA_24
AAA_7
DEAD
AAA_5
AAA_19
Cdc6_lid
bpMoxR
AAA_28
nSTAND6
Viral_helicase1
nSTAND3
Mg_chelatase
Trns_repr_metal
AAA_3
SLFN-g3_helicase
RNA_helicase
DNAX_ATPase_lid
AAA_18
nSTAND_NTPase5
IstB_IS21
Motif
Other DBs
NCBI-GeneID:
4839271
NCBI-ProteinID:
XP_001385155
JGI:
60537
UniProt:
A3LVH9
LinkDB
All DBs
Position
5:complement(760467..761435)
Genome browser
AA seq
322 aa
AA seq
DB search
YRVEKYRPSTLDEVYGQEEIVQTVKKFAHENRLPHLLFYGPPGTGKTSTIIALAREIYGT
NYKNMVLELNASDDRGIDVVRNQIKNFASTMQIFSRGFKLIILDEADAMTAVAQNSLRRI
IEKYTKNTRFCILANYAHKLNPALLSRCTRFRFHPISEDAIKDRIQNVIIKESLKIDPPA
EAALLKLSKGDMRRALNVLQACKSAVDSADEEITEDMIYECVGAPHPKDIEVVLDSILKD
DWTTAYITINKYKTTKGLALIDLISGFIEILNQYKLQGKTRIEIFKGLSEIEYGISRGGN
DKIQSSAIIGVIKDALEYEAVA
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
tacagggttgaaaagtaccgtccatctaccttagacgaggtgtacggccaagaagagatt
gtccagacagttaagaaatttgcccatgaaaacagattgccccatttgctattctatgga
cctcctggtactgggaaaacttctactatcatagcgttggcgcgcgagatctacggcacc
aactacaagaacatggttcttgagctcaatgcatcggacgacagaggtattgacgtagtt
agaaaccagatcaagaactttgcctccaccatgcagattttttccagaggtttcaagttg
attatcttggatgaagccgatgccatgacagctgtggcccaaaactcgttgagaagaatc
atcgagaagtataccaaaaacacccgtttctgcattcttgccaattatgctcacaaactc
aatccggcattgctttctagatgtacgcgtttccgcttccatcccatctctgaggatgcc
attaaagatagaatccagaacgtcatcatcaaagaaagtttgaaaatcgatcctccggct
gaggccgcattgcttaagctttcgaagggagacatgaggagagcattgaatgttttacaa
gcgtgcaagtcagccgtggactctgccgatgaagagattactgaagatatgatctatgaa
tgcgtaggcgcaccacatccgaaagatatagaagtagttctagactccattttgaaggac
gactggactacggcttacataaccattaacaagtacaaaaccactaaaggtttggcactc
atagacttgatttcaggcttcatcgaaatcttgaatcaatacaagttgcagggcaagaca
agaatcgaaattttcaagggtctaagcgagatagagtacggaatatccagaggaggaaac
gataagatccagagcagtgctatcatcggagtgataaaggatgcgttggaatacgaagca
gtagcttag
DBGET
integrated database retrieval system