KEGG   Scheffersomyces stipitis: PICST_60825
Entry
PICST_60825       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K11096  small nuclear ribonucleoprotein D2
Organism
pic  Scheffersomyces stipitis
Pathway
pic03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    PICST_60825
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:pic03041]
    PICST_60825
   03032 DNA replication proteins [BR:pic03032]
    PICST_60825
Spliceosome [BR:pic03041]
 Complex A
  U1 snRNP components
   Sm proteins
    PICST_60825
  U2 snRNP components
    PICST_60825
 Complex B
  U1 snRNP components
    PICST_60825
  U4/U6.U5 tri-snRNP components
    PICST_60825
 Complex C
  U2 snRNP components
    PICST_60825
DNA replication proteins [BR:pic03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Telomerase complex (fungi)
    Sm core complex
     PICST_60825
SSDB
Motif
Pfam: LSM Hfq
Other DBs
NCBI-GeneID: 4839560
NCBI-ProteinID: XP_001385240
JGI: 60825
UniProt: A3LW18
LinkDB
Position
5:complement(1213878..1214216)
AA seq 112 aa
FSELIDRPRSELTELELQKLEEFEFAHGPMSLIQNAVNNNTPIVISCRNNHKLIGKVRAF
DRHCNLILENVKELWTETSKNNKGKATKSISRERFISKLFLRGDSIVIILKA
NT seq 339 nt   +upstreamnt  +downstreamnt
tttagtgaacttattgatcgtcctcgttctgagttgacagaactcgaacttcaaaagtta
gaagagttcgaatttgcccatggacccatgtcacttatccagaatgctgttaataacaac
acacccatagtgatttcatgtcgtaataaccacaagttgataggcaaagtgcgtgctttc
gacagacactgtaatctcattttagaaaatgtcaaagagctttggacggagacatccaag
aacaacaagggcaaggctactaagtcaatctcgagagaaagattcatttccaaattgttt
ttaagaggagattctattgtgatcatattgaaggcatga

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