Scheffersomyces stipitis: PICST_61453
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Entry
PICST_61453 CDS
T01023
Symbol
USP39
Name
(RefSeq) ubiquitin specific protease
KO
K12847
U4/U6.U5 tri-snRNP-associated protein 2
Organism
pic
Scheffersomyces stipitis
Pathway
pic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PICST_61453 (USP39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
pic03041
]
PICST_61453 (USP39)
Spliceosome [BR:
pic03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP specific factors
PICST_61453 (USP39)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UCH
zf-UBP
UCH_1
Motif
Other DBs
NCBI-GeneID:
4839739
NCBI-ProteinID:
XP_001385345
JGI:
61453
UniProt:
A3LWP4
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Position
6:59777..61246
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AA seq
489 aa
AA seq
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MNGNDSTPLLKKQKVAAHEDSQSDAEFDFPEYMTSNVNHSAQQDTLYLDTIHRPLLDFDF
EKVCSVTLSNTNVYCCLVCGKYFSGRSRTSPSYTHSLENNHHVFINLHNEKYYVLPENYE
ITSYSALKSLRDINNFLNPKYTKSDIENLPVTARDLDHKSYDVGYVGLNNISANDYSNVV
IQALSHIVPIRNWYLSLSHRQDLNARLESMSPLNYNFGILVRKLWSKYLYRNHVSPHEFL
QYLSSTTKNQFSITRQSTPKKLLVWLLNNLHLQLSKSIKKSSTVLSDNLRGRIKVTSMEV
HTKEVNDKVEFETDENSAKESVSSFWVLTLDLISSPLFMDVTKIQEVALTKLLQKYDGKQ
TSQVSSSELRTYKLIAPLPRYLIFHIDRGLEKDGSTRGNPTVVQFSTTIDMAPYTEGADQ
SLNYKLLSTIKRQSTEGVKLDHSDDKNNWAISLRRTDDSWVCIKDLEFNACEGGLLFLEE
NYLQIWERC
NT seq
1470 nt
NT seq
+upstream
nt +downstream
nt
atgaatggaaacgattctactcctttgctaaagaaacaaaaagtagcagctcatgaagat
tcacaaagtgatgccgaattcgattttccagaatatatgacaagcaatgtcaaccattcg
gcacaacaagatactctttacctagataccatccacaggcctctattggactttgatttc
gagaaagtatgcctggtgactctttccaacaccaatgtttattgctgtttggtttgcgga
aagtatttcctgggaagaagcagaacttctccatcgtacacccattcgctcgagaacaat
catcatgtcttcataaatcttcacaacgaaaagtactatgttcttccagaaaactatgaa
attacatcatattcggccctaaaatcgctaagagatatcaacaacttcttgaatcccaaa
tacaccaaatcagacattgaaaatcttcctgttactgctcgagatctcgatcataaatcc
tacgatgtgggctatgtaggactaaacaatatatcagccaatgactattccaatgtcgtt
atacaagctctcagtcatatagttccaataaggaattggtacttgagtttatctcatcga
caggacttaaacgcaagattggaatccatgtctccgttgaattacaattttggaatattg
gtaagaaagctttggtccaagtacttgtacagaaaccatgtatctccacacgaattttta
cagtacttgtcgagcaccacaaagaaccaatttctgataactcggcaatcgactcccaag
aagttgttggtgtggttattgaataatttgcatcttcagctaagcaagctgatcaagaag
tcactgactgtactcagtgacaatcttcgaggtcggataaaagtcacttcaatggaagtt
cataccaaagaagttaacgataaagttgagttcgagaccgatgaaaattctgcaaaggag
ctggtactgtctttttgggttttaactctcgatttgatatcatcaccgttgttcatggat
gttactaaaatacaggaagtagcattaaccaagttattgcagaagtatgatggtaaacaa
accagtcaagtttcctcctcagagttgaggacatataagcttattgcgccgttgccacga
tacctcatcttccatatagacagaggactcgagaaggacggatccacgagaggaaaccct
acagtagtacagttttctacaactatcgatatggctccgtatactgaaggagctgatcag
tcgcttaactataagttgctcagtactataaagcgccagctgactgaaggtgtcaaattg
gatcacagtgatgacaaaaacaattgggctataagtcttcgtcgtacggatgattcctgg
gtatgtattaaggatttggaattcaacgcctgtgaaggaggattgcttttcctagaagag
aactatttacagatatgggaaagatgctag
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