Scheffersomyces stipitis: PICST_61538
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Entry
PICST_61538 CDS
T01023
Symbol
HAT2
Name
(RefSeq) histone acetyltransferase subunit
KO
K10752
histone-binding protein RBBP4
Organism
pic
Scheffersomyces stipitis
Pathway
pic03082
ATP-dependent chromatin remodeling
pic03083
Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
PICST_61538 (HAT2)
03083 Polycomb repressive complex
PICST_61538 (HAT2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_61538 (HAT2)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Nucleosome assembly factors
Histone chaperones
CAF-1
PICST_61538 (HAT2)
Histone modification proteins
HAT complexes
HATB complex
PICST_61538 (HAT2)
HDAC complexes
Sin3A-HDAC complex
PICST_61538 (HAT2)
Polycomb repressive complex (PRC) and associated proteins
PRC2.1
PICST_61538 (HAT2)
PRC2.2
PICST_61538 (HAT2)
Centromeric chromatin formation proteins
Kinetochore proteins
MIS16-MIS18 complex
PICST_61538 (HAT2)
Heterochromatin formation proteins
Other heterochromatin formation proteins
PICST_61538 (HAT2)
Chromatin remodeling factors
NuRD complex
PICST_61538 (HAT2)
NuRF complex
PICST_61538 (HAT2)
NuRF complex (fruit fly)
PICST_61538 (HAT2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1C_H4-bd
WD40_CDC20-Fz
WD40_Prp19
WD40
Beta-prop_RIG_2nd
WDR55
Beta-prop_EML_2
Beta-prop_CAF1B_HIR1
Beta-prop_EIPR1
WD40_WDHD1_1st
WD40_MABP1-WDR62_2nd
EIF3I
Beta-prop_TEP1_2nd
WD40_RFWD3
Beta-prop_EML
Beta-prop_WDR19_1st
Beta-prop_RIG_1st
MIOS_WD40
Beta-prop_WDR90_POC16_2nd
Beta-prop_IFT140_1st
NBCH_WD40
Beta-prop_SCAP
Motif
Other DBs
NCBI-GeneID:
4839737
NCBI-ProteinID:
XP_001385343
JGI:
61538
UniProt:
A3LWN8
LinkDB
All DBs
Position
6:48690..49883
Genome browser
AA seq
397 aa
AA seq
DB search
MDENVQRELTIKEEYQLWRKNCRYMYEFVSETALTWPSLTIQWLPQHTEEDGVIQSKLLL
GTHTSGEDTNYLKVASTELPSSQPTESAKKATSRIKISKKLTNDYEINRARYMPQDPDTV
ATINGEGNIDIYGLKSEEKNSLLHITPHDRNGYGLSWNSHRKGYLLSSSDDKSIVLTDIN
REALTSNQIFKNNSHSDIVNDVKWHTLDENMFASVSDDKHAYIFDLRTPNRPVSLFYNEV
SDGINSVAFSPFSKYLLAVGNTNSNINVLDLRKFSNNVKSKDGLLHTMMGHSDSITSLEF
SPHRDGIIASGAQDRRLIVWDLFKIGEEQQQEDAEDGCPELFMMHAGHTGSVTDLSWCPY
KDWTIGSVADDNIVHLWEVGKSLLEDGVGEIKETDLE
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggacgaaaatgttcaacgcgagctcaccatcaaggaggaataccaattgtggagaaag
aactgtcggtatatgtatgagtttgtttcggaaacagctttgacctggccttctttaacc
attcaatggttacctcagcataccgaagaagacggagtgattcagtccaagttgctcttg
ggtacacacacttctggcgaagataccaactatttgaaagttgcttctaccgaacttccc
tcttcccagccaacagaaagtgccaaaaaggctacttccaggatcaaaattagtaagaag
ttaaccaacgactacgaaatcaaccgtgctcgttatatgccgcaagatcccgatacggta
gccaccataaacggtgaaggcaacattgatatctacggcttaaaaagtgaagaaaagaac
tcccttcttcacatcacacctcacgaccgcaatgggtatggtctatcttggaacagccac
agaaagggttatttgttgtcgtcttcagacgataagtcaattgttttgactgatatcaat
cgtgaagcacttacttctaatcagatattcaagaacaattctcactctgacatagtcaac
gacgtaaaatggcacacccttgacgaaaacatgtttgcttcagtttcagacgacaaacat
gcctacattttcgatttgagaacgcccaataggccggtatcgttgttctacaacgaagta
tctgacggaatcaactctgtagccttctcccccttctccaagtacttgttagccgtgggt
aacactaactccaacattaatgtattggacttgcgaaagtttagtaacaacgtcaaaagt
aaagacggcctacttcataccatgatgggccattcagactcgattacttcgttggaattt
tctccacacagggacggaataatagcgtctggagcccaggatcgccggttgatagtctgg
gacttattcaagattggggaagaacagcaacaagaggacgccgaagatggatgcccagaa
ttatttatgatgcatgctggacatactggttcagtgacagacttgagttggtgtccatac
aaagactggaccattgggtctgtagctgatgacaacattgtccatctttgggaagtgggc
aagagtttgcttgaagacggcgttggcgagatcaaggaaactgatcttgagtag
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