Scheffersomyces stipitis: PICST_61635
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Entry
PICST_61635 CDS
T01023
Symbol
RPB9
Name
(RefSeq) DNA-directed RNA polymerase II
KO
K03017
DNA-directed RNA polymerase II subunit RPB9
Organism
pic
Scheffersomyces stipitis
Pathway
pic03020
RNA polymerase
pic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PICST_61635 (RPB9)
09124 Replication and repair
03420 Nucleotide excision repair
PICST_61635 (RPB9)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_61635 (RPB9)
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_61635 (RPB9)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Pol II specific subunits
PICST_61635 (RPB9)
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
PICST_61635 (RPB9)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Zn_ribbon_TFIIS
Zn_ribbon_RPB9
Cas12f1-like_TNB
DUF3716
DZR
RUBY_RBDX
Zn_ribbon_recom
HVO_0758
Zn_ribbon_Nudix
C1_1
Zn_ribbon_13
Zn_Ribbon_1
Motif
Other DBs
NCBI-GeneID:
4840207
NCBI-ProteinID:
XP_001385993
JGI:
61635
UniProt:
A3LYD6
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Position
6:complement(1519303..1519641)
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AA seq
112 aa
AA seq
DB search
MASFRFCAECNNMLYPKEDKDGQRLLYACRNCGYTELAENPKVYRHELITNIGETAGVVQ
DIGSDPTLPRSDKECTKCGNKECVFFQSQQRRKDTSMILFYVCLNCKTVFQA
NT seq
339 nt
NT seq
+upstream
nt +downstream
nt
atggcctcgttccgtttctgcgcagaatgcaacaacatgttatatccaaaagaagacaag
gatggccagagattactctatgcctgtcgtaattgtggctatactgagttggcagaaaac
ccaaaagtgtacagacacgagttgattacaaacatcggagaaactgctggggttgtccag
gacattggaagtgatcctactttacccagatctgataaggaatgtacaaaatgtggtaac
aaagagtgtgttttcttccagtcacaacagagaagaaaggatacctctatgatattgttt
tatgtctgcttgaactgtaagacagttttccaggcgtaa
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