Scheffersomyces stipitis: PICST_61778
Help
Entry
PICST_61778 CDS
T01023
Name
(RefSeq) predicted protein
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
PICST_61778
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pic03009
]
PICST_61778
Ribosome biogenesis [BR:
pic03009
]
Eukaryotic type
Pre-60S particles
RNases
PICST_61778
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_T
BH0509
HEPN_RES_NTD1
GBS104-like_Ig
Motif
Other DBs
NCBI-GeneID:
4840332
NCBI-ProteinID:
XP_001385740
JGI:
61778
UniProt:
A3LWX8
LinkDB
All DBs
Position
6:complement(<254526..>256463)
Genome browser
AA seq
645 aa
AA seq
DB search
MPEVAVDDPLSKRTARMSISTSDLDAESHNAQIRELLSESGIPGRRDSAVSLTSLNEDEI
QKSDPNASTDAIRPPTSQKRRRSSAQSFSSTTVAQVNKLIKTESLTKGRSRKKSYMSAGS
PQLSINVTGEKRLPFRSMRDLILKVFNCTSERPPKWFQFEKASGISKVVVCMVPGLPIHI
SESITTPQDIYDEKLSFLYETFSDFIATSSPGSKDSLYPSLETLINVPLTKKEKKQLLED
SKNTKITLYDLLMTTDQMVSHNYPVKVDVEKDEKWVETKAFDHDGSHTFALDCEFCEAKS
GKVLTRISLINFQGEVVLDKYVKPDEEIIDYLTKYSGITEEKLANITTSLKDIQEELLSI
ISADDILIGHSLESDLNVMKFKHLKIVDTAVIYEHVRGPPSKPALKWLTSNFLDRQIQCG
EVTGEGHSSVEDSNACLDLVKLKLQEGLCFGLNVGEVSIFKRLATEHKSRGEDFQSLLIN
YANHKEQESYAEPSDHNVQRIYVSNDDEVLSRYQEESVDKNMVVLNLRELDFTSGRYRVP
DHYTGPVSCENNSLLEITLERLKLIYNSLPANALFIIHSEVGDPREMFRLQSIRKKFQKM
DRDGEDLHQLAKEEIWDSDKLQQLIEETIAAKEAVTLVKVKTVDT
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaagtcgctgtcgatgatccgctcagtaaacgaactgctcgtatgtcgatttca
acctctgatctagacgccgagagtcacaacgctcagataagagagctattatcggaatca
ggaatccctggaagacgagactcagctgtttcacttacttcattaaacgaagacgaaata
caaaaatctgatcccaatgctagcacagacgcaattagaccaccaacatctcaaaagaga
agacggtcttctgctcaatcattttctagtacaaccgtggcacaagtaaataagctcatt
aaaactgagagccttaccaaaggaagaagcaggaagaaactgtatatgtctgctggttca
ccacagttatcaatcaacgtaactggcgaaaaacgcttgccatttcgtagtatgcgagat
ttgattctcaaagtatttaactgtacactggaaaggccaccaaagtggtttcagtttgaa
aaagcctccggtatatccaaagtcgttgtatgtatggttcctggcttacctattcacata
agcgaatcgataacaactcctcaagatatatatgatgagaagttactgtttctctatgaa
actttttcagacttcattgctacttcaagtccaggatcaaaggattcgctctacccttca
ttggaaacattaatcaatgtgccattgacaaaaaaggaaaagaagcaattgttggaggat
tccaaaaatacaaagattaccttgtacgatttacttatgactacggaccaaatggtgctg
cataactatccagtaaaggttgacgttgagaaagacgagaaatgggttgaaacaaaggca
tttgatcatgatggttctcatacgtttgcgcttgactgtgagttttgcgaagccaaatct
ggtaaagtgttgacgcgaatttcattaattaattttcaaggagaagtcgttttggataaa
tatgtcaaacctgatgaagaaatcattgattatttgaccaagtactccggaataacagaa
gagaaattggctaatatcactacttctcttaaggatatccaagaggaactattgctgatt
atttctgccgatgacatattgattgggcattctttggaatctgatttgaatgtcatgaag
ttcaaacacttaaaaattgttgatacagctgttatttatgagcatgtaagaggtccacct
ctgaagccggcgttgaaatggttgactctgaatttccttgatcgtcagatccaatgcggt
gaagttactggagaaggacattcttcagttgaagattcaaatgcttgtttagatttggtc
aagttgaaattacaggaaggcttatgctttggacttaatgttggagaagtatccattttc
aagaggttagcaactgagcacaagtcaagaggagaagacttccaatcacttcttatcaac
tatgctaaccataaggaacaggaatcttatgctgaacccagcgatcacaatgttcaaaga
atatacgtcagcaacgacgacgaagttttgagcaggtatcaagaagaaagcgtagataaa
aatatggtagttttgaacttaagggagttggatttcacttctggtagatacagagtacca
gaccattatactggaccagtttcatgtgagaacaactccctacttgagatcactttagaa
agattgaaattgatctataatagtctccctgcgaatgccttgttcataattcattctgaa
gtaggtgatccacgtgaaatgttcagattacaaagcattcgcaagaagtttcaaaagatg
gatagagatggagaggatctccatcaacttgctaaagaagagatttgggattctgataag
cttcagcagttaattgaggaaaccatagcagccaaggaagctgtcactttggtcaaggtc
aagaccgtggatacataa
DBGET
integrated database retrieval system