Scheffersomyces stipitis: PICST_62134
Help
Entry
PICST_62134 CDS
T01023
Name
(RefSeq) predicted protein
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
PICST_62134
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
WHD_HRQ1
Helicase_C
MZB
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-GeneID:
4839894
NCBI-ProteinID:
XP_001385349
JGI:
62134
UniProt:
A3LWQ5
LinkDB
All DBs
Position
6:79942..83475
Genome browser
AA seq
1178 aa
AA seq
DB search
MPPKKANINTSKWPPSFQRLYRLFVQINTHLTFLSSHSRTTIPTFELLQKLNPDINTLDL
TLMKGLLPDKHVAYKYVDENQLMLSMAEKVEYSRSHGYKQGNASSMDDAFEQVANNHGLS
GSNQLLVFDFQDTRMHGIGGVVKGGRAKRRKVEQNDTNNDFFLSSSDLAFSPLTQIQLTR
MINSRSDNFKEILKAYLDGFSEEEVSQDIPMQKLVAKYEPLIPQPPVLNDPVEQLEHSHK
VVDRKSKPTLDEMLIVLKQEPFYKGQIEQVCTLTPAQKAMKVPLGDFEGHIYNIHPELRD
ALYNYKGIDIYKDLYSHQADALKTLLQPNSFGRHVIVSTATASGKSLIYQIPVLNEILWD
ITNGKKSRSTTAFFIFPTKALAQDQKRHLEEFISYLPTNEKRKIIVQTYDGDTASRDRNF
VRSFADIVFTNPDTIHASVLPNHLGYSDSSGWIPFLRSLKFIVVDELHVYKGTFGIQVSY
VMTRLLRITEKLKNGVNDITFVSCSATISNPVAHFRAVCAIPKCDQVVHVANDGSPCSER
KLVVWNPPALMNKKGQIQSTLKSSMTIESTVSNTLIPRVGIVAESARLLVHLLSNLSEIK
VIVFCPIRVVCELLMNEVRHLLRSSDHTERALLNEHDIMSYRGGYSKEDRRVIEQKMFTG
QLRAIVATNALELGIDLSDLDIVITCGFPISKSHMHQQFGRAGRARDSKGSLAIFVAGPT
PIDQYYLSNYKDILDKNSYEDLCVDGLLDLGSYHLTLEQHMQCAAFEDPLDIVEDLKWFA
PDGSTGKANAFVKICQERLLKDNTGKYRTSPNFLPWPSDLVTIRAIEESSFAVVDITNGR
NIVIEEVESSRTNFTLYEGGIFLHQGFPYLVREFNADQKFAKVERVNVDWTTSQRDFTDM
DPMEAQYVKQLYPPNSAVPSDIPVFLGLVKTTIKVFGFFKLNRRNEILEAVDVKNSPVII
INKGFWVDIGSEVIDIINKKQLSPAAGIHAASHAIINILPVFINGTVDTSSKSYYSGVGE
AELVTECKAPEKEFARRESNRKRPARLIFNDSKGGELGSGMSAKAFEYFDEILQTTFDKV
RNCECEWGCPLCIAPKFCKERSIVMSKPAALLILASLLGYDLNEFQEQVQDGPEQNMPAI
TIETIESGPSTVKFSKDVEIISVRKARHPLNPKVEVKE
NT seq
3534 nt
NT seq
+upstream
nt +downstream
nt
atgccacccaaaaaagcaaatatcaatacgtcgaaatggcccccgtcgttccaaagattg
tataggctctttgtccagatcaatacccatttgacttttctttcgtctcattctagaaca
accataccgacatttgaacttcttcagaaactcaatcctgatatcaacacgcttgatttg
acattaatgaagggtttacttcccgataaacacgttgcttacaaatatgtggacgagaat
caactcatgctatctatggcagagaaagtggagtacagcagatcacacggctataagcag
gggaatgctagctctatggatgatgcctttgaacaagtagcgaacaaccatggcctctct
ggctccaatcaattactcgtatttgacttccaagacacaagaatgcacggaataggtggc
gtagtaaaaggaggcagggccaaaagaagaaaggtagaacagaatgatactaataatgat
ttctttctttccagttcggatttggcttttctgcctttgactcaaatccaactaactaga
atgattaacagtagatccgacaacttcaaagagatactaaaggcatatctagatggattt
agtgaggaagaagtttcacaagatattcccatgcaaaagttggttgccaaatatgagcct
ttaataccgcaacctcctgttttgaacgatccagtagaacaattggaacattcgcataaa
gttgtagatcgcaagtctaaaccaacattggatgaaatgctcattgttttgaagcaggaa
cctttttataaaggtcagatcgaacaggtttgtaccttgactcctgctcagaaagctatg
aaggtgcctttaggggacttcgaaggccatatatataatattcatccggaactaagagat
gctctatacaattataaaggaattgatatatacaaggacttgtattcccatcaagctgat
gccttaaaaacactcttacaacccaatagttttggaagacatgttattgtgagtactgcc
acagcttcagggaagtcgctcatctatcagatcccagtattgaatgaaattttgtgggat
attactaatggtaagaaatccagatcgacaactgcattcttcatatttccgaccaaagca
ttagctcaggatcaaaaacgacatttggaagaatttatactgtacctacccaccaatgaa
aagagaaaaattatagtacaaacatatgatggagatacggcaagccgagatagaaacttt
gttagatcttttgctgatattgtatttaccaacccagatacaattcatgcatctgtatta
cctaatcacctagggtattctgattcctctgggtggattccgttccttcgtagtctcaag
ttcattgtagtcgatgaattgcatgtgtataagggtacctttggtattcaagtaagttat
gtgatgactagacttctaagaattaccgagaaactcaaaaatggggtcaatgacattacc
tttgtttcatgttcagcaacaatttccaatcctgtggctcatttcagagcagtttgtgct
ataccaaagtgtgatcaagtagttcatgttgccaacgacggcagcccatgctctgagagg
aagttggtagtgtggaatccaccagctttgatgaataagaagggtcagattcagtctaca
ttaaagtcttcaatgacgatagagtctactgtaagtaacactctaattccaagagtggga
atagttgctgaactggctcgattgttggttcatctcctttcaaatttgtccgaaattaaa
gtgattgtattctgccctattagagttgtgtgcgaattgcttatgaacgaagtaagacat
cttttaagatcctcggaccatacagagagagcacttttgaatgaacatgatatcatgtct
tatcgaggaggttattcaaaggaagatagaagagtcattgagcagaagatgtttaccgga
caacttagagctattgtagccactaatgctttggagttgggaatagatttatcggatcta
gatattgtaattacatgtggcttccccattctgaagctgcatatgcatcaacaatttgga
agagctggtagagcaagagattccaagggaagtttggcaatatttgtagcgggtcccact
cctattgaccagtattacctaagcaattataaggatattcttgacaagaactcctatgaa
gacctttgcgtcgatggactcttggatttaggttcataccatttgacattagaacagcac
atgcaatgtgctgcatttgaggacccacttgatattgtagaggatttgaagtggtttgct
ccagatggttcaacaggtaaggcgaatgcgtttgttaaaatctgtcaggagagactcctc
aaggataatactggcaaatacaggacttcgcctaacttcttgccttggcccagcgatctt
gttaccattagagctatagaagagtcttcctttgctgttgtagatatcactaatggacgt
aatatcgttattgaagaagtggaatctctgagaaccaatttcactctctacgaaggtggc
atttttcttcaccaaggattcccctacttagtcagagaattcaatgcggaccaaaagttt
gctaaggtggaaagagtgaatgtcgattggacaactctgcagagagattttacggacatg
gaccccatggaagcacaatatgtaaagcagctctatccacccaatctggctgtcccgtct
gatatacccgtatttcttggtttggtgaaaaccaccataaaagtgtttggcttttttaag
ttgaatagaagaaatgagattcttgaagcagtagacgtcaaaaattcacctgtcattata
attaataagggattctgggttgatataggtagtgaggtaatcgatatcatcaataagaag
caattatcgccagctgctggtattcatgctgctctgcatgccataatcaacatcttacct
gttttcatcaatggtacggttgatacttctagcaaaagctactactctggtgttggagag
gccgaattggtgacagaatgcaaagcaccagaaaaggaattcgcgagacgtgaatctaac
cgtaagcgaccagctagattgatctttaatgattccaaaggaggggaactaggcagtggc
atgtcagcaaaagcgtttgaatattttgatgagattttgcaaaccacttttgacaaggtg
cgtaattgtgaatgtgaatggggctgtccattgtgtattgctcccaagttttgtaaagag
agactgatagtgatgtctaaaccagcggctttgttaattttggcttccttgttgggatac
gatcttaatgaatttcaagagcaggtgcaagatgggccggagcaaaatatgcctgctatc
accatagagaccattgaaagcggtccatctactgtgaaattttcaaaggatgtggaaata
atcagtgtaagaaaagctcgacaccctttgaatccaaaggtagaagtaaaggaa
DBGET
integrated database retrieval system
