Scheffersomyces stipitis: PICST_63360
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Entry
PICST_63360 CDS
T01023
Name
(RefSeq) predicted protein
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_63360
Enzymes [BR:
pic01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
PICST_63360
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
PICST_63360
Prokaryotic type
PICST_63360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
Motif
Other DBs
NCBI-GeneID:
4840629
NCBI-ProteinID:
XP_001386163
JGI:
63360
UniProt:
A3LZC9
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Position
7:789857..791050
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AA seq
397 aa
AA seq
DB search
MNGVFAVYKPSGMSSAKFISDIQEVFTKSGVFEEDLNKAKSKAFADLSTNARWSKQKVQN
RVRNLKVKIGHGGTLDPLASGVLVVGVGLGTKKLQYYLSECNKTYETKALLGLSTTTGDS
EGEIITKNPVNHITKEMILETAPKFVGHVKQTPPIFSALKVDGKPLYEYAREGIPLPKAI
KTRDIQIFDIKVHEENSLSTEHEFEKLKSELDADGNPKENGLANNPTLNDSPLYFSDEYM
EKAESENLPKTVDKPLVFGEGEDLPEKLPLIHFTSDVSSGTYIRSLISDYGRALRSSAYM
VELIRVRQSEWSLDKNVFKFEDFTENDERIWGPVLKRVLDNGGEVNVAEAFDEVRAKVLP
VIEKEKELLAESETKSDEQQNGDSELPKKRNIDELES
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgaatggagtgtttgcagtctacaagccttctggaatgtcgtctgctaagtttatcagc
gacatccaggaggttttcacgaaatcgggagtttttgaagaagatttgaataaggcaaag
agcaaagcctttgctgatttgagtaccaatgccagatggtccaagcagaaagttcagaac
agggtgcggaacttaaaggtgaaaattggccacggtggaaccttggatccacttgccagc
ggagttttggttgttggtgtagggttgggaacgaagaagttacagtactacttaagtgaa
tgtaataagacttatgagactaaagcattgttaggattatccacaactacaggtgactct
gaaggtgaaatcataaccaaaaaccctgttaaccacatcaccaaggagatgattttagaa
acagctcctaaatttgtaggtcatgtcaagcagactcccccaattttttcagctttgaaa
gtagacggaaaaccgttgtacgaatacgccagagaaggtattcctcttccaaaggccatc
aagactagagatattcaaattttcgatatcaaagtccacgaggaaaactccttgagcact
gaacatgaatttgaaaagttgaaaagtgagcttgatgctgatggaaaccccaaagaaaac
ggattggcaaataacccaactcttaacgattctcctttatacttttctgatgagtatatg
gaaaaggccgaactggaaaacttgcccaagacagtagataaacccttagtgtttggtgaa
ggagaagatttgcctgaaaagttaccgttgattcattttacttctgacgtttcctccggt
acctacatcagaagtttgatcagtgattatggaagagcgttgaggtcatcggcttacatg
gttgagttgatcagagtcagacaatcagaatggtctttagacaagaatgttttcaagttt
gaggactttacagagaatgacgaaagaatatggggtcccgtattgaagcgtgtattggac
aacggtggtgaggttaatgtggcagaggcatttgatgaagtcagagcaaaagttcttcca
gtgattgaaaaggagaaggagctacttgctgagagtgaaacgaagagcgatgaacagcag
aacggtgattcagagcttcccaagaagagaaacatagacgagttagaatcatag
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