KEGG   Scheffersomyces stipitis: PICST_63551
Entry
PICST_63551       CDS       T01023                                 
Name
(RefSeq) transcriptional repressor TUP1
  KO
K06666  general transcriptional corepressor TUP1
Organism
pic  Scheffersomyces stipitis
Pathway
pic04011  MAPK signaling pathway - yeast
pic04111  Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:pic00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   04011 MAPK signaling pathway - yeast
    PICST_63551
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    PICST_63551
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pic03021]
    PICST_63551
Transcription machinery [BR:pic03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Others
     PICST_63551
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_WDHD1_1st WD40_CDC20-Fz Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_2nd Tup_N Beta-prop_EML_2 WDR55 EIF3I WD40_MABP1-WDR62_2nd NBCH_WD40 Beta-prop_IFT122_1st ANAPC4_WD40 Beta-prop_EML Beta-prop_WDR90_POC16_2nd Beta-prop_TEP1_C WD40_MABP1-WDR62_1st Beta-prop_WDR75_1st WDR90_beta-prop_4th Beta-prop_SCAP Beta-prop_DCAF12 Beta-prop_RIG_2nd RMC1_N Beta-prop_EIPR1 Beta-prop_Nup120_160 Beta-prop_DCAF4 WD40_like Beta-prop_WDR19_1st Beta-prop_IFT140_1st Beta-prop_SPT8 Beta-prop_WDR75_2nd Beta-prop_HPS5 Beta-prop_NUP159_NUP214 Beta-prop_Vps41 Beta-prop_NWD2_C Beta-prop_ELP1_1st Beta-prop_IP5PC_F VPS8_N Siah-Interact_N SUIM_assoc Beta-prop_NOL10_N
Other DBs
NCBI-GeneID: 4840582
NCBI-ProteinID: XP_001386024
JGI: 63551
UniProt: A3LYL3
LinkDB
Position
7:35506..37335
AA seq 522 aa
QRQQHQQRLNELLDAVKQEFDYALTEASSFKQVKEDYDIKYNQQTAEMQQIRQTVYELEM
AHRKIKEAYEEEILRLKTELESRDRQAQIQQQQQQQPSQPAAIQTPSQQALPPPIKQSPP
KQEIKPTSTALTVIDKSQYIVNPTQKALHVKEIPPFLSDLDVSKANPDFKKQKLDYYVLY
NPAFARDLDVELIHSLDHSSVVCCVRFSKDGKFIATGCNKTTQVFNVETGELVAKLIDDN
NSSDAASAVAAANGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLNTKRIIKILRGHEQDI
YSLDFFPDGDRLVSGSGDRTVRIWDLRSSQCSLTLSIEDGVTTVAVSPDGQLIAAGSLDR
TVRVWDSTTGFLVERLDSGNENGNGNGHEDSVYSVAFTINGKQIASGSLDRTVKLWNLEG
KQDPQGNNSPGKKSSCEVTYIGHKDFVLSVCSTPKNEYILSGSKDRGVIFWDQLSGNPLL
MLQGHRNSVISVAVSLNSQGTEGIFATGSGDCKARLWKWTRK
NT seq 1569 nt   +upstreamnt  +downstreamnt
cagagacagcagcatcagcaaagattgaacgagttgttggacgcagtcaagcaggagttt
gactatgcattgacagaagcatcgtcgttcaaacaggtcaaagaggactatgacattaaa
tacaatcagcaaactgctgagatgcaacaaataagacaaaccgtttacgagttggaaatg
gcccatagaaaaattaaggaggcctacgaggaagagatcttgcgcttgaaaacggagttg
gagtcccgggacagacaggcccagatccaacaacagcaacagcaacagcctctgcaacca
gcagctattcaaaccccatcgcagcaggcattgcctccacctatcaaacagtctcccccc
aaacaggaaatcaagcctacctcaactgcattgactgtcatcgacaaatcgcagtacatt
gttaaccccacccaaaaggctctacacgtcaaggagattcccccattcttgtcagacttg
gatgtttccaaagcgaacccagacttcaagaaacagaagttagactattatgtcttgtac
aacccggccttcgctcgtgatttggatgtcgagttgattcactcgttggaccactcttcg
gtagtttgttgtgtgcgtttctccaaggacggtaagttcattgctaccggttgcaataag
actacacaagtgttcaacgtcgaaacgggagaattggtggccaagttgatcgacgacaac
aactcatctgacgctgcttctgccgttgccgccgctaatggtgacttgtatatcagatcc
gtttgtttctctccggatgggaagttattggcaaccggcgctgaagacaagttgatcaga
atctgggacttgaacaccaagagaattatcaagatcttgcgaggtcacgaacaggatata
tattcgttggacttcttccctgatggagacagattggtctctggttctggagacagaacg
gtgagaatctgggacttgagatcgtcacagtgctcgttaactctttccattgaagatgga
gtgaccacggtcgctgtttccccagatggccaattgatcgcagctggttctcttgacaga
acagtcagagtctgggattctactactggtttccttgttgaaagattagattccggaaac
gaaaacggcaatggaaatggccacgaagactctgtctactctgttgctttcacaattaac
ggcaagcaaattgcttctggttctttggacagaaccgttaagttgtggaacttggaagga
aagcaagacccacaagggaacaacagcccaggtaagaagtccagctgcgaagtgacctac
attggacacaaggactttgttttatctgtctgctctacgccaaaaaatgaatacatactt
tctggttccaaggaccgtggtgttattttctgggatcaactttctggtaatccattgttg
atgcttcaaggacaccgaaactctgtcatatcggttgccgtttccttgaactcccaaggc
actgaaggcatttttgctaccggtagtggagactgcaaggcaagattatggaaatggacc
agaaaataa

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