Scheffersomyces stipitis: PICST_63551
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Entry
PICST_63551 CDS
T01023
Name
(RefSeq) transcriptional repressor TUP1
KO
K06666
general transcriptional corepressor TUP1
Organism
pic
Scheffersomyces stipitis
Pathway
pic04011
MAPK signaling pathway - yeast
pic04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
PICST_63551
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PICST_63551
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_63551
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Others
PICST_63551
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_WDHD1_1st
WD40_CDC20-Fz
Beta-prop_CAF1B_HIR1
Beta-prop_TEP1_2nd
Tup_N
Beta-prop_EML_2
WDR55
EIF3I
WD40_MABP1-WDR62_2nd
NBCH_WD40
Beta-prop_IFT122_1st
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR90_POC16_2nd
Beta-prop_TEP1_C
WD40_MABP1-WDR62_1st
Beta-prop_WDR75_1st
WDR90_beta-prop_4th
Beta-prop_SCAP
Beta-prop_DCAF12
Beta-prop_RIG_2nd
RMC1_N
Beta-prop_EIPR1
Beta-prop_Nup120_160
Beta-prop_DCAF4
WD40_like
Beta-prop_WDR19_1st
Beta-prop_IFT140_1st
Beta-prop_SPT8
Beta-prop_WDR75_2nd
Beta-prop_HPS5
Beta-prop_NUP159_NUP214
Beta-prop_Vps41
Beta-prop_NWD2_C
Beta-prop_ELP1_1st
Beta-prop_IP5PC_F
VPS8_N
Siah-Interact_N
SUIM_assoc
Beta-prop_NOL10_N
Motif
Other DBs
NCBI-GeneID:
4840582
NCBI-ProteinID:
XP_001386024
JGI:
63551
UniProt:
A3LYL3
LinkDB
All DBs
Position
7:35506..37335
Genome browser
AA seq
522 aa
AA seq
DB search
QRQQHQQRLNELLDAVKQEFDYALTEASSFKQVKEDYDIKYNQQTAEMQQIRQTVYELEM
AHRKIKEAYEEEILRLKTELESRDRQAQIQQQQQQQPSQPAAIQTPSQQALPPPIKQSPP
KQEIKPTSTALTVIDKSQYIVNPTQKALHVKEIPPFLSDLDVSKANPDFKKQKLDYYVLY
NPAFARDLDVELIHSLDHSSVVCCVRFSKDGKFIATGCNKTTQVFNVETGELVAKLIDDN
NSSDAASAVAAANGDLYIRSVCFSPDGKLLATGAEDKLIRIWDLNTKRIIKILRGHEQDI
YSLDFFPDGDRLVSGSGDRTVRIWDLRSSQCSLTLSIEDGVTTVAVSPDGQLIAAGSLDR
TVRVWDSTTGFLVERLDSGNENGNGNGHEDSVYSVAFTINGKQIASGSLDRTVKLWNLEG
KQDPQGNNSPGKKSSCEVTYIGHKDFVLSVCSTPKNEYILSGSKDRGVIFWDQLSGNPLL
MLQGHRNSVISVAVSLNSQGTEGIFATGSGDCKARLWKWTRK
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
cagagacagcagcatcagcaaagattgaacgagttgttggacgcagtcaagcaggagttt
gactatgcattgacagaagcatcgtcgttcaaacaggtcaaagaggactatgacattaaa
tacaatcagcaaactgctgagatgcaacaaataagacaaaccgtttacgagttggaaatg
gcccatagaaaaattaaggaggcctacgaggaagagatcttgcgcttgaaaacggagttg
gagtcccgggacagacaggcccagatccaacaacagcaacagcaacagcctctgcaacca
gcagctattcaaaccccatcgcagcaggcattgcctccacctatcaaacagtctcccccc
aaacaggaaatcaagcctacctcaactgcattgactgtcatcgacaaatcgcagtacatt
gttaaccccacccaaaaggctctacacgtcaaggagattcccccattcttgtcagacttg
gatgtttccaaagcgaacccagacttcaagaaacagaagttagactattatgtcttgtac
aacccggccttcgctcgtgatttggatgtcgagttgattcactcgttggaccactcttcg
gtagtttgttgtgtgcgtttctccaaggacggtaagttcattgctaccggttgcaataag
actacacaagtgttcaacgtcgaaacgggagaattggtggccaagttgatcgacgacaac
aactcatctgacgctgcttctgccgttgccgccgctaatggtgacttgtatatcagatcc
gtttgtttctctccggatgggaagttattggcaaccggcgctgaagacaagttgatcaga
atctgggacttgaacaccaagagaattatcaagatcttgcgaggtcacgaacaggatata
tattcgttggacttcttccctgatggagacagattggtctctggttctggagacagaacg
gtgagaatctgggacttgagatcgtcacagtgctcgttaactctttccattgaagatgga
gtgaccacggtcgctgtttccccagatggccaattgatcgcagctggttctcttgacaga
acagtcagagtctgggattctactactggtttccttgttgaaagattagattccggaaac
gaaaacggcaatggaaatggccacgaagactctgtctactctgttgctttcacaattaac
ggcaagcaaattgcttctggttctttggacagaaccgttaagttgtggaacttggaagga
aagcaagacccacaagggaacaacagcccaggtaagaagtccagctgcgaagtgacctac
attggacacaaggactttgttttatctgtctgctctacgccaaaaaatgaatacatactt
tctggttccaaggaccgtggtgttattttctgggatcaactttctggtaatccattgttg
atgcttcaaggacaccgaaactctgtcatatcggttgccgtttccttgaactcccaaggc
actgaaggcatttttgctaccggtagtggagactgcaaggcaagattatggaaatggacc
agaaaataa
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