Scheffersomyces stipitis: PICST_641
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Entry
PICST_641 CDS
T01023
Symbol
SMC3
Name
(RefSeq) chromosome condensation and segregation protein
KO
K06669
structural maintenance of chromosome 3 (chondroitin sulfate proteoglycan 6)
Organism
pic
Scheffersomyces stipitis
Pathway
pic04111
Cell cycle - yeast
pic04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PICST_641 (SMC3)
04113 Meiosis - yeast
PICST_641 (SMC3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_641 (SMC3)
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
pic00535
]
PICST_641 (SMC3)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
PICST_641 (SMC3)
Meiosis-specific proteins
Cohesin complex and associated proteins
PICST_641 (SMC3)
Proteoglycans [BR:
pic00535
]
Extracellular matrix (ECM) proteoglycans
Basement membrane proteoglycans
PICST_641 (SMC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_hinge
SMC_N
AAA_23
CCDC39
AAA_15
AAA_21
AAA_13
Filament
FtsK_SpoIIIE
MTR4-like_stalk
SRF-TF
AAA_29
CT398_CC
Fez1
SlyX
Motif
Other DBs
NCBI-GeneID:
4838830
NCBI-ProteinID:
XP_001384253
JGI:
641
UniProt:
A3LUE4
LinkDB
All DBs
Position
4:<1555970..>1559002
Genome browser
AA seq
1011 aa
AA seq
DB search
MHIKKIIIQGFKTYKNATVIDLVSPHHNVVVGRNGSGKSNFFAAIRFVLSDDYTHMGREE
RQALIHEGSGTVMSAYVEIVFDNRDGRIPLNRNEVVIRRTIGLKKDDYALDGKSATRSDI
LNLLESAGFSRSNPYYIVPQGRITSLTNAKDSDRLVLLKEVSGATVFENKLKESEKEMNN
STYKKQRIDETLASIDERLSDLQIESADLKKFQSLDKSKKILEYNLFDREFTDLKTSIDE
TDETYNELLTESQQDLQDLDNREKLCQQLSDTINDLKISIKVSQLNKEQSDLDYNQMLKI
VAEKEVKLSDLKSTLHSSRHNVEEVNRQIVKYRQVIAEHESKVSSLKPQLDSLQGREREY
KEKLVDLTSKQRALYSKQNRFSKFKTKRERDTWLTTEISTLKKQLQSKETDISQLNSEIK
NQESDISGWNTQIDKLNGQLHDGSHSNSIHKLKTTVGDLKSQINELNDRRKLLWRDEIRF
RSIYDSINNDLNNANNMVNSTMDRAQAQGLAAVKTIAVNLNLTENVYGPLASLFSVSDKY
KVAAEVIAGNSLFHVVVDNDNTASLIMNELARSKAGRVTFIPLNRIDFSPIEFPDSNEHQ
CIPLIKKLKFNENVSKAIHQVFGKTIVVGDLPTGAELVRSYNVSAITLDGDRADRRGVLT
GGFRDYKRSRIDALKIQAKKKVDLEKIESELQECVKEIESVNQNITSLNNEYQLSVRDLD
RLQQGQEPIKIELSQLSNKKFNVEQELNSLRYNVSNAQATRSTLLIKIKQHEGELDNNFT
QSLSDEELQTLEDLTSQIKDVEAQLDKVVTQLSDSETQISALDSAMLNDYKPTLSKLLKQ
STSFGDSNTNDEEVRSLEKEIKNLQVELHSIQIRNESATQEFDRISKEIADSENSLKKAN
AQQLILIKKLEKFSKSSEQILNRKAILTNRREEIHKKIKELGVLPEEAFQASNYDQYNSD
QLLEKLNKVNEDLSKYSHINKKAMEQYNTFTKQRDDLVKRREELDTSRESI
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgcacatcaagaagatcatcatccagggcttcaagacgtacaagaatgccacggttata
gatctcgtgtctccacaccacaatgttgtggtgggacgaaatgggtctggaaaatccaat
tttttcgccgcgatcagattcgtattatccgacgactacacccatatgggccgggaagaa
agacaggcgttgatccacgagggctccggaactgtgatgtcagcatatgtagagattgta
ttcgacaatcgcgatggcagaattcctcttaacagaaacgaagtagtaatcagaagaact
atcggtttgaagaaggacgattacgcgttggatggaaaatcagctacgcgttctgatatc
ctcaatcttttggaaagcgcagggttttcgagatcaaacccctactatatagttccgcag
ggaaggattaccagtttgaccaatgccaaggattcggatagactcgtcttgttgaaagaa
gtcagtggagccacagtgtttgaaaacaagctcaaggaatccgaaaaggaaatgaataac
tccacttataaaaagcagcgtattgatgaaactcttgcttccatcgacgaaagattgtcg
gatttacagatcgaatcagccgacttgaagaaatttcaaagtttggataaatccaagaag
atcttggaatataatttgtttgaccgtgagttcacggacttgaagacctccatagacgaa
actgacgaaacatacaacgaacttttgacagaatcgcaacaagatctccaggatctagat
aatcgtgaaaagttatgtcagcagttatctgacacaattaacgacttaaagatctctata
aaggtatcgcaattgaataaggagcagtctgatttggattacaaccagatgttgaaaata
gtagcagagaaggaagtcaaactaagcgacttgaaatctacgctccattcgtcgcgtcat
aatgtggaagaagtgaaccgccaaattgtaaagtacagacaggtgattgcagaacacgaa
tccaaggtatctagcttgaaaccccagttagatagcttgcaaggaagagaacgtgaatac
aaggaaaaattggtagatttaacttctaaacaaagagctttatattctaaacagaataga
tttctgaagttcaagaccaaaagagagagagatacgtggttaacgacagaaatatcgact
cttaagaagcagcttcaatctaaggaaaccgatatcagtcagttgaattcagaaatcaag
aaccaggaaagtgatatcagtggatggaatactcagattgataagttaaatggacaactc
cacgacggatcccattccaattcaatccacaaattgaagaccactgtaggtgatttgaaa
ctgcaaatcaatgagctcaacgataggcgtaagctcttgtggcgtgatgaaattagattc
agaagtatctatgattccatcaataatgacttaaacaatgccaataacatggtcaatctg
actatggatagagcacaggcccaaggacttgctgctgtgaaaactattgctgtcaacttg
aacttgactgagaacgtttatggtccattggcttcgttattcagtgtcagcgacaaatac
aaggtagctgctgaagtaattgcaggaaactctttgttccatgtagttgttgacaatgat
aacacggcatcgttgataatgaacgagcttgcaagatccaaagcaggaagagtaactttc
attccgctcaatagaattgacttctcaccaattgagttcccagatagcaatgagcatcaa
tgtattccattgataaagaaattgaaattcaatgaaaacgttagtaaagctattcatcaa
gtttttggcaagaccatcgttgtaggtgacttaccaacaggagcagaattagttagatcg
tacaatgtttctgctatcacattggatggtgacagagctgatagaagaggagtcttgaca
ggtggtttcagagattataaaaggtcgagaatagacgcattgaaaatacaagcaaaaaag
aaggttgacttagaaaagattgaatctgaattgcaagaatgtgtcaaggaaattgagctg
gtcaatcagaatattacatctttgaataatgaatatcaactcagtgtccgtgatttggac
cgattgcagcagggacaagaaccaattaagattgaattatctcaattgtccaacaagaag
tttaatgtcgaacaagaattgaatagtctaagatacaacgttagcaacgcccaagcaaca
agaagtacgttgttgatcaaaattaaacagcatgaaggtgaattggataataatttcact
caatcattgagcgatgaggaacttcaaaccttggaggacttaactagtcaaataaaagac
gtggaagcgcaattggacaaggtcgtcactcagttgtctgattcagaaacccagatttct
gccttggattcggcgatgcttaatgattacaagccaactttgtcgaagcttcttaaacag
agtactctgtttggtgatagtaatacaaacgacgaagaagtaaggtcacttgaaaaggaa
attaaaaatttgcaagtggaattgcattctattcagataagaaatgaatctgccacacaa
gaattcgatagaatcagtaaggaaatcgcagatagtgaaaattcattgaagaaagcaaat
gctcaacagcttattctaatcaagaaattggagaagttctcgaagtcttccgaacaaatc
ttgaacagaaaggcgattttgacaaacagacgtgaagaaattcataaaaagatcaaggaa
ttgggtgttttacctgaagaagcttttcaggcgtcgaactacgatcaatacaactcagat
caattgttagaaaagttgaacaaagtcaatgaagacttatccaaatactctcatattaac
aaaaaggcaatggaacagtacaatacgttcacgaaacagagagacgatttggtcaaaaga
agggaggaattggatacttctcgtgagtccatc
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