Scheffersomyces stipitis: PICST_64147
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Entry
PICST_64147 CDS
T01023
Symbol
SMC1
Name
(RefSeq) Structural maintenance of chromosome protein 1 (sister chromatid cohesion complex Cohesin, subunit SMC1)
KO
K06636
structural maintenance of chromosome 1
Organism
pic
Scheffersomyces stipitis
Pathway
pic04111
Cell cycle - yeast
pic04113
Meiosis - yeast
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PICST_64147 (SMC1)
04113 Meiosis - yeast
PICST_64147 (SMC1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_64147 (SMC1)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
PICST_64147 (SMC1)
Meiosis-specific proteins
Cohesin complex and associated proteins
PICST_64147 (SMC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_15
AAA_21
AAA_23
AAA_29
ABC_tran
SbcC_Walker_B
Motif
Other DBs
NCBI-GeneID:
4841167
NCBI-ProteinID:
XP_001386531
JGI:
64147
UniProt:
A3M0D4
LinkDB
All DBs
Position
8:661198..664920
Genome browser
AA seq
1240 aa
AA seq
DB search
MGRLIGLELHNFKSYRGTTKIGFGSSFFTSIIGPNGAGKSNLMDAISFVLGVRSSHLRSQ
NLKDLIYRGRRTNGNSDLSVDELEQDPNRAHVTAIYEKDDGEIVKFKRTISSSGNSEYRV
NDVSVTSLNYSLVLKAENILIKARNFLVFQGDVEQIASQSPTDLTKLIENISGSNEFTKE
YESLKEEYERAREFSNSVFSRKRNLNSESRQYKEQLIEQRQFEERLMEKNETIKRINLYH
IYHNERKHFQIQEEIDAKTAELKELKKGLSSEQKQFKTISADYSKKVLESKKHTKKLEQV
ATQIESAKRDLIPMQANKRAMTSKANSTKTKIEDLQADLKRQKASASSVQKQLDQAQKLF
ADFENKIASSTSLSISPEGQKEYSKLRSQFLSRGGSAFEEDISILLNEKDSLLAAITGLE
NQRANSATRINELQSTINSELKSSLADINTEINDVLSRKQEKVDARSALIKSKEEFQYQE
LQLKSQLRDVLIKLDEISSQQRESNKQKKLRENVAMLKRLFPEGAIKGIVYELVRPSEQK
FESAVQTVLGRNIDSVIVQTTSVAYKCIEILKERRAGVVTFIPLDSIQSEPINLNYLRSI
HESAQPGIDILKYDDKSLEQAINYIAGDALVVKDINLARNLKWDSHHKLENRIISLNGSV
IHKSGLMTGGQQSQKSSASLTWDREEWISLNSVKDELTTRLSTLQENKPKELEINLLADE
ISSLDDGLPVLRNQKMSTERTIRDREAEVKFQTELQKSFDDSINSKKAKLVKLDQKTDEI
RNKTASLKNEIYSEFCYDYGFSNGIDDYENLHGATLRVRVKERAQYSKAIATFSNKLKFE
NERVNETIQREESLKSQLLELEENTSTVMSEIQLVESKIDNLEAELEVLEHEQSNQNKEL
QSNLKKSKTFEASVAELESNISTLNKGILSLEEQLLKIDTERVNILKNCKIENVNIPLKD
GLLDSISIGETSDNLVKEIYDIEIDYSNLDESLRRTYSAKLEAELQTKLEEIIEQLERLT
PNAKAVDRLKEAEAKLRNFDKEHTLARQKERKVYDKFQEVREKRYQTFMEAFNHISSKID
SIYKELTKFPASPLGGAAYLTLEDDEYPYNSGIKYHAMPPMKRFRDMELLSGGEKTMAAL
ALLFAIHSYQPSPFFVLDEVDAALDNANVSKIANYIRKYAGPNYQFIVISLKNSLFEKSD
ALVGIYRDQRQNSSSTLTLDLTEYSEEGLSVSGQAVTASG
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atgggtaggctaatcggccttgagttacacaactttaagtcgtaccgaggaacaacaaaa
atcggatttggtagctcgtttttcacctccatcattggcccaaatggtgctggaaaatca
aatttgatggatgcaatttcgtttgtattaggagtcagatcctctcatttgagatcgcaa
aacttgaaagacttgatttaccgaggaagaagaacaaacggcaacagcgatctttctgta
gacgaattggaacaggatcctaatagagcccatgtgactgctatctatgaaaaagacgat
ggagaaatcgtcaagttcaagagaacaatttcgtcctcaggaaacagcgaataccgcgtc
aacgacgtgtctgtcacgtcattaaactattcattggtcttaaaagctgaaaacattctt
atcaaagcgcgcaacttcttggtattccaaggcgatgtagaacagatagcatcgcagtcg
ccaactgatctcacaaaactcattgagaatatcagtggttccaacgaatttaccaaagaa
tacgaaagcttgaaggaagaatatgaaagagccagagagttctcgaattccgtattctca
cgtaaaagaaacttaaactctgaatcaagacagtataaggagcagttgatagagcaaagg
cagttcgaagaaagattaatggaaaaaaatgagaccataaagagaatcaacttataccat
atttatcacaatgagcgcaagcacttccaaattcaagaagaaattgatgccaagactgct
gaactcaaagaattgaaaaaaggtctctcttccgaacagaagcagttcaaaacgatctct
gccgattattccaagaaggtattggaatccaaaaagcacactaagaaattggaacaggtt
gcaacgcaaattgaaagcgcaaagagagatctcataccaatgcaagctaacaagagagca
atgacttcgaaggcgaactcaacgaagactaaaattgaagatttgcaagcagatttgaaa
agacagaaggcgctggcaagctcagttcaaaaacaattagaccaagctcagaagttattt
gctgactttgaaaataaaattgcttcgtcaacttcactttcaatttcgcctgaaggacaa
aaggaatatctgaagttgagatcgcaattcttatctagaggtggatctgcttttgaggaa
gatatatctattcttcttaacgagaaagactcattattggctgctatcaccggtttggag
aaccaaagagctaattccgcaactagaattaacgagttacagtcgactataaattcagaa
ttgaaatccagtcttgcggacatcaacactgaaataaacgatgttttatctagaaagcaa
gagaaagtcgatgccagaagtgcgttgatcaagtccaaagaagaattccaataccaagaa
ctacaattgaaatctcaattgagagacgtcttgatcaagttggatgaaatatcatcgcaa
caaagagaatccaacaagcaaaagaagttaagagagaatgtagccatgttgaagaggctt
tttcctgaaggagcaatcaaaggaatagtgtacgagttggtacgcccttcagaacagaag
ttcgaaagtgctgttcaaacggttctaggcagaaacattgacagcgttatcgttcaaaca
accagcgtggcatacaagtgtattgaaattttaaaggaaagaagagctggtgtagttacg
tttattccgttggattccattcaaagcgagccgataaatttgaactatttgagatctatc
catgaatctgcccaaccgggtattgatatccttaaatacgacgacaagtctttggagcaa
gcaattaactacattgctggcgatgctttagttgtcaaagatattaatctcgccagaaac
ttgaagtgggactcgcaccacaagttggaaaacagaatcatatctctcaatgggtccgtc
attcacaagtctggtttaatgacaggaggacaacagagccagaagagtagcgcctctttg
acctgggatagagaagaatggatatcattgaactcagtaaaggacgaactaactacaaga
ctctctacattgcaagagaacaaaccaaaggaacttgaaatcaatctcttggctgacgaa
atcagcctgttggacgatggattacctgtgctaagaaaccaaaagatgagcaccgaacgt
acaattagagacagagaagccgaagtgaagttccagacagaactccaaaagagttttgat
gattctattaatagcaagaaagcaaagttagtaaaactcgatcagaagactgatgagatt
cgcaacaaaacagcttctttgaagaatgagatttattccgagttctgttatgattatgga
ttttcaaatggtatcgatgattatgaaaacttgcatggcgcaacattaagagtaagagtc
aaggaaagggctcaatattcgaaggccatagccacttttagtaacaagttaaagttcgag
aatgaaagagtgaacgaaactatacaaagagaagaatcccttaaatcacaattattggaa
ctagaggaaaacactctgactgtaatgtctgaaattcagcttgttgaaagtaagatagat
aatctcgaggcagaacttgaggtattggaacacgagcaactgaatcaaaacaaggagctt
caatcaaacttgaagaaatctaaaacctttgaagcgtccgtcgcggagttggaatccaat
atatctacattgaacaaagggatactttctttagaggagcagttgttgaagattgatact
gagagagttaacatcttgaagaattgtaagatagaaaatgtcaatattccgttgaaagat
gggctcttggattctatttcgattggtgagacttcggataacttggtgaaggagatctac
gatatcgagatagattattccaatttggatgaatcattacgaagaacatatagtgccaaa
ctagaagccgaacttcaaactaagttggaagagattatcgagcaattggagagattgaca
ccaaatgcaaaagcagtggatagattgaaggaagctgaagcgaaacttagaaattttgat
aaagagcatacacttgcaagacaaaaggaacgtaaagtgtatgacaaattccaggaggtt
cgtgaaaagagataccagacttttatggaagcattcaatcatatttcttccaaaatagat
tcgatctacaaagagctcactaagttccctgcttctcctttgggtggtgctgcctatttg
acattagaggatgatgaatatccatacaattctggtatcaaataccacgctatgccacct
atgaaaagattcagagacatggaattactttcaggtggtgaaaagacgatggctgcactt
gcattactttttgctattcattcatatcaaccatctcccttttttgtacttgatgaagtt
gatgctgcccttgataatgctaatgttagcaaaattgctaactatattaggaaatatgct
ggacctaactaccagttcattgttatatctttgaagaactcgttgtttgaaaagtcagac
gctttagtgggtatatatagagaccagagacagaatagctcatcgacacttacattggac
ttgaccgagtactctgaagaaggtttatcagtatccggccaagcagttactgcttctggc
tag
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