KEGG   Scheffersomyces stipitis: PICST_64197
Entry
PICST_64197       CDS       T01023                                 
Name
(RefSeq) predicted protein
  KO
K15147  mediator of RNA polymerase II transcription subunit 5
Organism
pic  Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pic03021]
    PICST_64197
Transcription machinery [BR:pic03021]
 Eukaryotic type
  RNA polymerase II system
   Mediator complex
    Middle
     PICST_64197
SSDB
Motif
Pfam: Med5
Other DBs
NCBI-GeneID: 4840875
NCBI-ProteinID: XP_001386472
JGI: 64197
UniProt: A3M022
LinkDB
Position
8:410873..413929
AA seq 981 aa
MSETVSLHKLVKKAVHSKLSFKTFLGLFSQLNTKQVVQDGEYQTEILEIVQNPRNLNDKK
ITEYKVVLAIQLSLSSSEELKRFWGNLSKISLVGQVDYLIRLNKILKYEYSKYDKDIVRL
LIKVQYCDYIVEVLDSFGDKKLSTEQKSLANHIVFFASSVIEHVVVKDEALVNDLVFQLA
TRLEGLRLSNLLDFLLLKSKNILSEDQIRLTDSSGSGEDKSSDLPTITTSLYKNLSVGSL
SSAKQETYNETIKFLWLNKIMKSWKFADNESIFNNFVHNFIPSSDKNKNPYLTSFELIKA
TFKGFGYAVINNDDCYVLFNWKNFIITRIPVILSTLKFANVNDEETLERAVLNAFNSLPD
SIVKVLTNLASGSTKVYDLRQIFIKSLIFNRLLPPVAFQKFFPMESKITQQVILSELAQY
NHDLNLRRKFNDKLINVNSEFTSLEESGLLELCNSLPASLEYSYSRQIELSNAINDIIDE
MKISREHEKLNRLLLSVMSNVQLTNILVFNSNPYVVLGKMIDYIDSENFRIDDDDENFQD
VYSYCGVLILSIISIIEKFKIDLSTFNIKNSFALDYINNFYYRLCDDLTNQIPVNSDEED
NTIATNYNNLLIDWINALFDDSNDGLSDDLIKSISIKQIYKLIPLVYQQAITATSIGKID
FSILTNGIDYLSQVFLIPTTVSIINWLLSEISNKKTDAESLPVKVLSEIVKSNISSESGS
QELSSLVFKIVVNICGSNILIALKKIKDWENSQRIRDVVSIVTANLDSNYVEKDLSLPES
KSDININEQIKSHLVNFQQQADSPTPIHAFIHRFISDSKDQVLRVLLQEVTSYQKQNNEA
TKIFINLASYLVVSSSIDSVEDKKYWHGYLSNVSSSATEHKILKNSDKEFNSSMDYHYSS
IFNDASSGASNDDDLFNDKSSKQLSSGKLLEQLRTKVNRYNNLLAKFNVIFAENQDPSSP
WHKTVNTLADKLLDDINDLYI
NT seq 2946 nt   +upstreamnt  +downstreamnt
atgtccgagacagtttctcttcataagttggtgaagaaggcagttcatctgaagttgctg
ttcaagacttttcttggacttttttcccaattgaacacaaaacaggtcgttcaagatgga
gagtaccagactgagatactagaaatcgtacagaatccccgaaatttgaatgataaaaag
ataactgagtataaagtagtattggccatacaattgtctttatcttcctctgaagagttg
aaacgtttttggggcaatttatctaaaatctcactcgttggccaagtggactatttgatc
cgattgaacaagatcttgaagtatgagtactccaagtacgacaaggatatcgtgcgattg
cttataaaggtccagtactgtgactacattgtggaagttcttgatctgtttggtgacaag
aagttgctgacagaacagaagtcgttggctaaccatatagtcttctttgcttcttctgtt
atagagcatgttgtggtgaaggatgaagctttggtaaacgaccttgtttttcagttagcc
acacgtcttgaaggtcttcgtttgagcaatttgctagattttttgcttttgaaatctaag
aatatattgagtgaagatcaaatcagacttactgacagttctggctctggtgaagacaag
tcactggacttgcccactatcaccacctctttgtacaagaacttgtcagtgggcagcttg
agttcagccaaacaggagacatacaacgagactatcaaatttctctggctaaacaagatt
atgaagctgtggaaatttgcagataacgaaagcatcttcaataatttcgtacacaacttc
attcccagcagcgacaagaacaaaaatccgtatttgacatcgtttgagttgatcaaagcg
acgtttaagggatttggctatgctgtgataaacaacgacgattgctatgttcttttcaac
tggaaaaatttcatcataacgagaattccagtcattttgtctacattgaaatttgcaaat
gtaaacgacgaagagacgttagaaagagctgtactcaatgcgtttaactctcttcccgat
tctattgtaaaagttctaacgaatttggctctgggaagtactaaagtgtatgacttgaga
cagatttttatcaagagtttgatatttaacagattgttaccacctgtggcttttcagaaa
ttcttccccatggagtcgaaaataactcaacaggtgattttgtctgagcttgcacagtat
aatcacgatttgaacttgcgtcgcaagtttaacgacaagttgattaacgtaaacagcgag
ttcacttctttagaagaatctggattattggagctttgcaattctctccctgcttcttta
gaatatctgtacagtagacaaatcgagttgagcaacgctatcaacgatatcatcgacgaa
atgaagatctcccgtgagcacgagaagttgaaccgccttcttttgtctgtgatgtcgaat
gttcaattgacaaacattcttgtcttcaacagcaacccgtatgtcgtgttgggcaaaatg
atcgactatattgattctgagaactttcgaatcgatgacgacgacgaaaacttccaggat
gtgtattcgtactgtggagtgttaatcttgtcgatcatttccattatagagaaatttaag
attgacttgtctacgtttaacatcaagaactcgtttgcattggactatataaataacttc
tactatcgtctatgcgatgacctcacaaatcaaatcccggtcaatagtgacgaagaagat
aacactatagcaacaaactacaacaatttgttgatagactggatcaatgccttattcgat
gatagtaatgatggcttatcagacgatttgatcaagtcaataagcatcaaacaaatttac
aaacttatccctcttgtttaccaacaagccattaccgcaacaagtattggaaagattgac
ttttctattctcaccaacggaattgattatttgtcacaggtatttttgattcctacaacg
gtgagtataatcaactggttactcctggaaatttccaacaagaagactgatgctgaaagc
ttgccggtaaaagtgttgtccgaaatcgtgaaatccaatattagtagtgaatcaggttca
caagagttgtcttctttggtattcaaaatcgtcgtcaacatatgtggaagtaatattttg
atcgctttgaagaaaattaaagactgggaaaattcgcaaagaatccgagatgtggtctct
atagtaacagcaaatttggactccaactatgttgaaaaagatcttagcttgcctgaatcc
aagctggacattaacattaatgaacagataaaatcgcaccttgtcaacttccagcaacag
gcagactctccaacaccaattcatgcctttatacatagattcatcagcgactccaaagat
caagtgttgcgagtgttgcttcaggaagtcacctcgtaccagaagcagaacaacgaggcc
acaaagattttcatcaatcttgcttcctacttagtcgtttcaagctccatagactctgta
gaagacaagaagtactggcacggctatttgtctaatgtttcgagttctgcaacagaacac
aagattttgaagaattctgataaggagttcaactcttctatggactaccactattcgagc
atctttaatgacgctagctctggtgcgtctaatgacgatgacttgttcaacgacaaaagc
tcgaagcaattgtcttcaggaaaattgcttgaacaactccgaacaaaggtcaatagatat
aacaatttgttggccaagttcaatgtgatttttgctgagaatcaagatccttccagcccc
tggcacaagacagtgaatacattggcagataagcttcttgacgatatcaacgacttgtac
atatag

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