Scheffersomyces stipitis: PICST_64717
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Entry
PICST_64717 CDS
T01023
Symbol
TAF5
Name
(RefSeq) TFIID and SAGA subunit
KO
K03130
transcription initiation factor TFIID subunit 5
Organism
pic
Scheffersomyces stipitis
Pathway
pic03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PICST_64717 (TAF5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_64717 (TAF5)
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_64717 (TAF5)
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIID
PICST_64717 (TAF5)
Coactivators
SAGA/TFTC/STAGA complex
PICST_64717 (TAF5)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Histone modification proteins
HAT complexes
PCAF complex
PICST_64717 (TAF5)
STAGA complex
PICST_64717 (TAF5)
TFTC complex
PICST_64717 (TAF5)
SAGA complex
PICST_64717 (TAF5)
SLIK complex
PICST_64717 (TAF5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
TFIID_NTD2
ANAPC4_WD40
NBCH_WD40
WD40_like
RMC1_N
LisH
eIF2A
Nup160
PROPPIN
WDR54
Motif
Other DBs
NCBI-GeneID:
4840945
NCBI-ProteinID:
XP_001386490
JGI:
64717
UniProt:
A3M063
LinkDB
All DBs
Position
8:507439..509820
Genome browser
AA seq
782 aa
AA seq
DB search
MAGDNNNSNATNQPHELNPPTQTSSQPSQPSQAGSVRAPANQTASQPAQPRGQQPSFSQA
DLNRIVLEYLNKKGYHRTESMLRLESSNTPTPAVTPVSPATSSLASPGEIVSPANAARRE
KELKDKLNKNDREMRELKERQARVERELREARDREIRLVKEKELREIKDLEEKKKRENDP
DVYFTVYSMLKKWVDTSLDLYKPELSRVLYPLFIHCFFELISKNFVDSGKRFFDKFKSDH
IILHGVEINQLAGISLPEHLKENELALAYRRNKYKIVVSKTSMNLLLYFLHENEAVGGAI
LIRIINQYLDTVISSAKLDKVDQEGEANPEEGIPQYVAKTNEIDKFNEQSVKLGKFPIDP
EVQKEVEAELKVKDERSSPVNGKTLVEEFAEMTKPETDSPAREALPLPLKDHADIKRMIL
DVEDSRSKIKLGALQASAPSVCMYTFHNTSNDMTCIDFNEDSNMIAAGFQDSFIKLWSLD
GRPLKSVFKRDRYNSDNTRKLIGHSGPVYSVSFSPDNRYLLSGSEDKTVRLWSLDSYTAL
VSYKGHNQPIWDVKFSPLGHYFATASHDQTARLWATDHIYPLRIFAGHINDVDCVEFHPN
SNYVFTGSSDKTCRMWDVQTGNCVRVFMGHTGPVNCMAVSPDGRWLASAGEDSVVNIWDA
GTGRRLKTMKGHGRSSIYSLSFSRDGGVLVSGGADNTVRVWDVKRDTNDAGPEPEMFSSV
ENGSSNGSDPEAARAKAVDKVNKKEIIATSDHMTAYFTKKTPVYKVHFTRRNLCLAGGAF
MS
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
atggctggagacaataataacagcaatgccaccaatcaacctcacgagttgaaccctccc
actcaaacactgtctcaaccatcacaaccttcccaagctggatcggtacgagctccagcc
aatcagacggcatcgcaaccagctcagcccaggggccaacagccactgttctcacaagca
gatttgaaccgaattgttcttgaatatctcaacaagaaaggataccatagaacagaatca
atgttgagattagaaagctccaatactcccacaccagcagtaacgcctgtgagtccagcg
acaagtctgttggctagtccaggcgaaatagtatcaccagccaatgctgctagaagggaa
aaggaattaaaagataaattgaacaagaacgaccgcgagatgagagaattgaaggaaaga
caagccagagtagagcgagaattgagagaagcaagagacagagaaattcgcttggttaaa
gagaaggaattgcgcgaaatcaaggatttggaagagaagaagaaacgcgaaaatgatcca
gacgtctacttcactgtgtactctatgttgaaaaaatgggttgatacgtcgttggacttg
tacaagccggagttatcgcgtgtattgtatccgttgttcatccactgtttctttgagttg
atctcgaagaacttcgtggatctgggaaagcggttctttgacaaatttaagagcgaccat
attatcttgcacggtgtagaaatcaaccagttggcaggcattctgttgccagagcatttg
aaggaaaatgagttggcacttgcttacagaagaaataagtacaagatcgttgtttccaag
acgtcgatgaatttgttattgtactttttgcacgaaaatgaagctgtaggtggagctatc
ttgattcgtatcatcaaccagtatttggatacagtcatttccagcgccaagctcgacaaa
gtagaccaggaaggcgaagccaatcccgaagaaggaattccacagtatgtggccaagaca
aacgaaatagataaattcaacgaacaactggtaaaattgggaaaattccctatcgaccct
gaagtccagaaggaagtagaagctgagctcaaggttaaggatgagagatcctctccagta
aatggaaagactttggtagaagaattcgctgaaatgacaaaaccagaaacagattctcca
gccagagaagctttgcctcttcctcttaaggaccatgctgatatcaaaagaatgatatta
gatgtagaggattccagatccaagatcaagttgggagccttacaagcgtctgccccttcc
gtttgtatgtatactttccacaacacttccaacgacatgacatgcatagatttcaacgag
gattccaatatgatagctgctggattccaggacagtttcataaagttgtggagtttagat
ggaagaccacttaaatctgtatttaagagagatcgctacaactctgacaacacccgtaag
ctcattggccatagtggtcctgtttatagcgtgtcattctcaccagacaacagatacctt
ttatctggttcagaggataaaacagtgcgactctggtcgcttgactcttacacagctctt
gtatcatacaagggacataaccagcctatttgggatgtcaaattctcaccattgggccac
tacttcgctacagcttctcacgatcaaactgccaggttgtgggctacagaccatatctat
cccttgaggatatttgctggccatatcaatgacgtggactgcgtagaattccaccctaac
tctaactacgtgttcactggttcgtctgacaagacatgtagaatgtgggacgtacagact
ggtaactgcgtcagagtgtttatgggccacactgggcctgtgaactgcatggcagtttct
ccagacggtagatggctagccagtgctggcgaagacagtgtagtcaacatctgggacgct
ggaactggcagacgtttgaagacaatgaagggtcatggccgttcttctatctactctttg
tccttttctagagatggtggtgtcttggttagtggaggtgccgataatactgtgagagta
tgggatgtcaagagagacacaaatgatgctggaccggagccagagatgttttcatctgta
gaaaatggctccagcaatggctctgatccagaagctgccagagccaaagctgtagataag
gtcaataagaaggaaatcatagcgactagcgaccatatgacggcttacttcactaagaaa
actcccgtgtacaaggtccatttcacaagaagaaacttgtgtcttgctggtggagcattc
atgagttag
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