KEGG   Scheffersomyces stipitis: PICST_64825
Entry
PICST_64825       CDS       T01023                                 
Symbol
MET30
Name
(RefSeq) SCF complex F-box protein MET30
  KO
K10259  F-box and WD-40 domain protein MET30
Organism
pic  Scheffersomyces stipitis
Pathway
pic04111  Cell cycle - yeast
pic04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    PICST_64825 (MET30)
 09140 Cellular Processes
  09143 Cell growth and death
   04111 Cell cycle - yeast
    PICST_64825 (MET30)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:pic04121]
    PICST_64825 (MET30)
Ubiquitin system [BR:pic04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   SCF complex
    Target recognizing subunit (F-box)
     PICST_64825 (MET30)
SSDB
Motif
Pfam: WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st EIF3I Beta-prop_TEP1_C WDR55 Beta-prop_TEP1_2nd Beta-prop_SCAP Beta-prop_CAF1B_HIR1 WD40_MABP1-WDR62_2nd Beta-prop_WDR90_POC16_2nd Beta-prop_EML_2 Beta-prop_WDR75_1st F-box-like Beta-prop_EML Beta-prop_DCAF4 Beta-prop_SPT8 NBCH_WD40 Beta-prop_Nup120_160 F-box ANAPC4_WD40 WD40_RFWD3 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_IFT122_1st Beta-prop_DCAF12 WD40_like Beta-prop_IFT140_1st Beta-prop_Vps41 WDR90_beta-prop_4th F-box_4 Nucleoporin_N PRANC Beta-prop_IFT140_2nd DnaJ
Other DBs
NCBI-GeneID: 4851050
NCBI-ProteinID: XP_001387792
JGI: 64825
UniProt: A3GFK1
LinkDB
Position
1:complement(814500..816967)
AA seq 612 aa
MNLQESCIPQEGSSSSKFDSLLTTASNTESDVSVVTPFLVKHISDQSLIPKDNFHKYCYR
HNPDITCNKRTDEDKMKKIQTALDKLPSRDQEAIAHVWSIFSAAPSAHRQIILNGILTQC
CFPQLSYVAQEVSSLIRIDFISTLPVEISLKILCYLDCNSLCNAAQVSRKWKSLADDDRV
WHHMCEQHIDRKCPNCGWGLPLMHMKRAREMTEEDIKPILKRRIEEITNAKRMKLSSSQE
SPQPQKQLKKRPWKSVYSERFKLEKNWRKGIYTVKKFLGHTDGVTCLQFNRKYLMTGSYD
TTIKIWKIETGECLKTLTGHTKGVRSLVFDSQKLITGGLDSTIKVWNYHTGQCIATYKGH
EDAVVSVDFSNKSIVSGSADHTVKVWHVDSRTCYTLRGHTDWVNCVKIHPQSNTIFSASD
DTTIRMWDLQNNQCLRVFGGMDKNGHIGQVQSVIPFTYKEELIEDGSESESESNHLHNSS
HNRTGGGSISGVATGNEPAENLDEVDELPWNPNYPTHLLTSSLDNTIKLWDVKTGKCIRT
QFGHIEGVWSIAADTFRIISGAHDRLIKVWDLQNGRCLHTFGNNASVSCVGLSDSRFAAG
LESGAVKMYCFD
NT seq 1839 nt   +upstreamnt  +downstreamnt
atgaacttacaagagtcatgtattcctcaggaagggtcgtcttccagcaaattcgacagc
ttgctaaccaccgccagcaacaccgagctggatgtttcagtagtgacaccttttcttgtg
aagcacatcagcgaccagctgttaattcctaaagacaacttccacaagtactgctacaga
cacaatccggacatcacttgtaacaaacggacggatgaagacaagatgaagaagatacaa
actgctttggataaactcccctctagggaccaggaggccatagctcatgtgtggtcgatt
ttctctgccgcccccagtgcacatcgtcagattatcctcaacgggatattgacccagtgt
tgctttccacaattatcgtatgttgcccaagaggtatcatcgctcattagaattgatttc
atctccactttgcctgtagagatctcgctaaaaattttgtgctatttggattgcaattct
ctttgcaacgcagcacaggtatccagaaaatggaagtcgttagctgacgatgatagggtc
tggcaccacatgtgtgaacagcatatagatcgtaaatgtcctaactgtggctggggcttg
cctttgatgcatatgaagagagctcgtgagatgactgaagaagacattaagcctatctta
aaacgtaggatagaagaaattacaaacgccaagagaatgaagttgagctcatcacaggaa
ctgccacagccccagaagcagttgaagaagagaccatggaaatctgtctactcagaaaga
tttaagttggagaagaactggagaaagggtatttacactgtgaaaaagttcttgggtcat
actgacggagtcacatgtttgcaattcaaccgtaagtacctcatgactggctcttacgat
acaaccataaagatttggaagattgaaactggtgaatgcttgaagacgttgactggccat
acgaagggagtcagatctttggtgtttgattcacagaaattgattactggtggtcttgat
tcgactatcaaggtctggaactaccatactggtcagtgtattgctacttacaagggacat
gaagacgctgtggtatctgtagatttttccaacaagtctatcgtatctggatctgctgac
cataccgtcaaggtgtggcatgtagactcgagaacctgctacaccttaaggggacacact
gactgggtcaactgtgtcaaaatccatccacagtccaacactatcttcagtgcttctgat
gataccaccattagaatgtgggatcttcagaacaaccagtgcttaagggtgtttggtgga
atggataagaatggacatattgggcaagttcaaagtgtcattccctttacttataaagaa
gagttgattgaagatggaagtgaaagtgaaagtgaatccaaccatttacataactcgagt
cacaaccgtactggcggaggttctatttcaggtgttgcaacaggaaatgaacctgccgag
aaccttgacgaagtagacgaattgccttggaatcctaactatccaacgcatttattgact
tcttctttggataacaccataaagttgtgggatgtgaagactggtaaatgtattagaacc
cagtttggccacatcgaaggtgtgtggagtattgctgctgatactttcagaatcatcagt
ggtgcccacgacagattgatcaaggtatgggacttacagaatggtaggtgtttgcatact
tttggaaacaatgccagtgtcagctgtgtcggtttgagcgattcgagatttgctgctggt
ttggaaagcggagctgtgaagatgtactgttttgattga

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