Scheffersomyces stipitis: PICST_64825
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Entry
PICST_64825 CDS
T01023
Symbol
MET30
Name
(RefSeq) SCF complex F-box protein MET30
KO
K10259
F-box and WD-40 domain protein MET30
Organism
pic
Scheffersomyces stipitis
Pathway
pic04111
Cell cycle - yeast
pic04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
PICST_64825 (MET30)
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PICST_64825 (MET30)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
pic04121
]
PICST_64825 (MET30)
Ubiquitin system [BR:
pic04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
PICST_64825 (MET30)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
EIF3I
Beta-prop_TEP1_C
WDR55
Beta-prop_TEP1_2nd
Beta-prop_SCAP
Beta-prop_CAF1B_HIR1
WD40_MABP1-WDR62_2nd
Beta-prop_WDR90_POC16_2nd
Beta-prop_EML_2
Beta-prop_WDR75_1st
F-box-like
Beta-prop_EML
Beta-prop_DCAF4
Beta-prop_SPT8
NBCH_WD40
Beta-prop_Nup120_160
F-box
ANAPC4_WD40
WD40_RFWD3
Beta-prop_RIG_2nd
Beta-prop_EIPR1
Beta-prop_IFT122_1st
Beta-prop_DCAF12
WD40_like
Beta-prop_IFT140_1st
Beta-prop_Vps41
WDR90_beta-prop_4th
F-box_4
Nucleoporin_N
PRANC
Beta-prop_IFT140_2nd
DnaJ
Motif
Other DBs
NCBI-GeneID:
4851050
NCBI-ProteinID:
XP_001387792
JGI:
64825
UniProt:
A3GFK1
LinkDB
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Position
1:complement(814500..816967)
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AA seq
612 aa
AA seq
DB search
MNLQESCIPQEGSSSSKFDSLLTTASNTESDVSVVTPFLVKHISDQSLIPKDNFHKYCYR
HNPDITCNKRTDEDKMKKIQTALDKLPSRDQEAIAHVWSIFSAAPSAHRQIILNGILTQC
CFPQLSYVAQEVSSLIRIDFISTLPVEISLKILCYLDCNSLCNAAQVSRKWKSLADDDRV
WHHMCEQHIDRKCPNCGWGLPLMHMKRAREMTEEDIKPILKRRIEEITNAKRMKLSSSQE
SPQPQKQLKKRPWKSVYSERFKLEKNWRKGIYTVKKFLGHTDGVTCLQFNRKYLMTGSYD
TTIKIWKIETGECLKTLTGHTKGVRSLVFDSQKLITGGLDSTIKVWNYHTGQCIATYKGH
EDAVVSVDFSNKSIVSGSADHTVKVWHVDSRTCYTLRGHTDWVNCVKIHPQSNTIFSASD
DTTIRMWDLQNNQCLRVFGGMDKNGHIGQVQSVIPFTYKEELIEDGSESESESNHLHNSS
HNRTGGGSISGVATGNEPAENLDEVDELPWNPNYPTHLLTSSLDNTIKLWDVKTGKCIRT
QFGHIEGVWSIAADTFRIISGAHDRLIKVWDLQNGRCLHTFGNNASVSCVGLSDSRFAAG
LESGAVKMYCFD
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atgaacttacaagagtcatgtattcctcaggaagggtcgtcttccagcaaattcgacagc
ttgctaaccaccgccagcaacaccgagctggatgtttcagtagtgacaccttttcttgtg
aagcacatcagcgaccagctgttaattcctaaagacaacttccacaagtactgctacaga
cacaatccggacatcacttgtaacaaacggacggatgaagacaagatgaagaagatacaa
actgctttggataaactcccctctagggaccaggaggccatagctcatgtgtggtcgatt
ttctctgccgcccccagtgcacatcgtcagattatcctcaacgggatattgacccagtgt
tgctttccacaattatcgtatgttgcccaagaggtatcatcgctcattagaattgatttc
atctccactttgcctgtagagatctcgctaaaaattttgtgctatttggattgcaattct
ctttgcaacgcagcacaggtatccagaaaatggaagtcgttagctgacgatgatagggtc
tggcaccacatgtgtgaacagcatatagatcgtaaatgtcctaactgtggctggggcttg
cctttgatgcatatgaagagagctcgtgagatgactgaagaagacattaagcctatctta
aaacgtaggatagaagaaattacaaacgccaagagaatgaagttgagctcatcacaggaa
ctgccacagccccagaagcagttgaagaagagaccatggaaatctgtctactcagaaaga
tttaagttggagaagaactggagaaagggtatttacactgtgaaaaagttcttgggtcat
actgacggagtcacatgtttgcaattcaaccgtaagtacctcatgactggctcttacgat
acaaccataaagatttggaagattgaaactggtgaatgcttgaagacgttgactggccat
acgaagggagtcagatctttggtgtttgattcacagaaattgattactggtggtcttgat
tcgactatcaaggtctggaactaccatactggtcagtgtattgctacttacaagggacat
gaagacgctgtggtatctgtagatttttccaacaagtctatcgtatctggatctgctgac
cataccgtcaaggtgtggcatgtagactcgagaacctgctacaccttaaggggacacact
gactgggtcaactgtgtcaaaatccatccacagtccaacactatcttcagtgcttctgat
gataccaccattagaatgtgggatcttcagaacaaccagtgcttaagggtgtttggtgga
atggataagaatggacatattgggcaagttcaaagtgtcattccctttacttataaagaa
gagttgattgaagatggaagtgaaagtgaaagtgaatccaaccatttacataactcgagt
cacaaccgtactggcggaggttctatttcaggtgttgcaacaggaaatgaacctgccgag
aaccttgacgaagtagacgaattgccttggaatcctaactatccaacgcatttattgact
tcttctttggataacaccataaagttgtgggatgtgaagactggtaaatgtattagaacc
cagtttggccacatcgaaggtgtgtggagtattgctgctgatactttcagaatcatcagt
ggtgcccacgacagattgatcaaggtatgggacttacagaatggtaggtgtttgcatact
tttggaaacaatgccagtgtcagctgtgtcggtttgagcgattcgagatttgctgctggt
ttggaaagcggagctgtgaagatgtactgttttgattga
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