Scheffersomyces stipitis: PICST_65151
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Entry
PICST_65151 CDS
T01023
Name
(RefSeq) predicted protein
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_65151
Enzymes [BR:
pic01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
PICST_65151
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
PICST_65151
Prokaryotic type
PICST_65151
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_4
Lactamase_B_2
Motif
Other DBs
NCBI-GeneID:
4836697
NCBI-ProteinID:
XP_001382363
JGI:
65151
UniProt:
A3LNH6
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Position
2:649199..651865
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AA seq
871 aa
AA seq
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MFTISTVSHITADTKHPLVMLTSREGYKYLFGKVPEGTQRVLNENKFKLAKLKSLFLTGT
LSSWSDIGGLPGLFLTLSDSSKKGIDVFTNSKSLLSYVVSTWRCFVFRKGAELKLFDTNE
ENIIGDNNLVIRPIKIASNVENINQDSAVAKRLAVQMKKLVSLMFPKDTSKVNDRDPNSY
KSDPTETDIHTHVRIPEPQALLPTAQQSAVSYLVRFLPIRGKFDPVKAKSLGLQPGANYR
KLSQGVAVENDQGVLIQPQQVVADPKTFPKLLILDIPNKSYLDNSLGSDKWFEKNDDLGE
EEVGIVYHFLGDDVDFETPAYQDFIAKFPRDSKHIISHPKLANNTLVFKRSAIDVLTLKC
IMKDNFNLPHIEPYESLPEGSVFKLHQLQQFHVQSSGVEVDTSLIQSDSWESIYNENIAG
LNLPDVNLGDIVDSEPSTLDALSGSLKDQVHIVTLGTGSALPSLHRNVISTLVRIPYHSS
QGDIRFNSILLDGGENTLGTFSRNFGHNMGEQARKVMKELSLIYLSHLHADHHLGIVSVI
NEWFLVNNEDHRKLYLIVPWQYETFISEWYKLEGQLNDSVNLDRIEFLSCEDFLPDRLPK
YHKIDIDDFEYLYDNNDLNRIVAKSPLEPLNRSAISRLFADLRIKEIATVRALHCAWAYS
VSITFDLEDNESFKVSYSGDTRPNPKFVDIGRDSDLLIHESSLDNELIEEAIAKKHSTMI
EAINVARYMNCSKLILTHFSTRYSNKTNTVRNSEALIALSQSLNNYLTKYRVSPNIFALE
GQAYPIKSYDELDICYGYDFMNYRFKDLHLQKQKMDLIYDTFEAEEDDDKKERETSKQRE
KQEVRRMQRLQSKNSVHKKRKVSGSEDEEDQ
NT seq
2616 nt
NT seq
+upstream
nt +downstream
nt
atgtttacaatactgacggtgtctcacatcaccgctgataccaagcatccgttggtgatg
ctcactagtagagaagggtataaatatctctttggaaaagttccagaaggcacccaaagg
gttttgaacgaaaacaagttcaaactcgccaagttgaagtcactcttcttgacaggaact
ttgtcgtcctggtcggatatcggtggacttcccggtctctttttgacgttgagcgattct
tccaagaagggtatcgatgtcttcaccaattccaagctgctcttgtcgtatgtcgtcagc
acatggagatgctttgtctttcgtaaaggtgcagaattgaagctctttgacactaatgaa
gagaatatcatcggggacaacaatctcgtcatcagacctataaaaatagccagtaacgta
gagaacataaatcaagattcagctgtcgcaaaacgcttagctgtacaaatgaagaagctt
gtgtctctaatgttccctaaggataccagtaaagtcaacgatagagatcccaactcttac
aagtcagaccctacagaaacagatatccacacgcatgtcaggattccagaaccacaagct
cttctcccaacagcacaacaactggctgtaagctacttagtcaggttcttgcctattcgg
ggaaagtttgatccggtaaaagctaaaagtttaggcttacagccaggtgcaaactataga
aaattgagtcagggtgtagctgtagaaaatgatcaaggagttcttattcaaccacaacaa
gtagttgccgaccccaaaacgtttcccaagcttcttattttggatatccccaacaagtcg
tacttggataattctcttggtagcgacaagtggtttgaaaagaatgatgatttaggtgaa
gaagaggtaggtatcgtctatcactttttgggagatgatgtggattttgaaactcctgct
taccaagatttcatagccaagtttcctcgtgattcaaaacatataatcagccatccaaag
ttggcgaacaacacgttggtattcaagagatcggctatagatgttttgactctcaaatgt
atcatgaaggacaacttcaacttgccccacatagaaccttatgaatcgttacctgaaggc
tcggtcttcaagttgcatcagttacagcaatttcatgtacaatctctgggtgtagaagtt
gacacttcgttgattcaaagcgatagttgggaaagcatatataacgagaatattgctggg
ttgaacttaccagatgttaacctcggtgatattgttgattctgagccaagtacgttggat
gccctttcaggctctctcaaagatcaggttcatatagtcactttgggaactggttcagcc
ttgccctcgttgcatcgtaatgtcatttcaactttagttagaatcccgtaccattcttct
caaggagatatcagattcaactctattttgttggatggtggtgaaaacactttgggtact
tttctgagaaactttggccacaatatgggtgaacaagctagaaaggtaatgaaagagttg
tcgttgatttatttgagccatttgcatgccgatcaccatttaggaattgtgtctgttatc
aacgaatggttcttagttaacaatgaagaccacagaaagctttacttgattgttccatgg
cagtacgaaacgtttatctctgagtggtataagcttgaaggtcagttgaatgatctggta
aatttggacagaattgaattcttgagttgtgaagactttttaccagacagactacccaag
taccataagatcgatatcgatgactttgagtatctctatgataataacgatctcaatcgt
attgttgccaagtctcctttggaaccattgaacagatcggctataagccggctcttcgct
gatctcaggatcaaagaaattgctacagtcagagctcttcattgtgcctgggcgtattcg
gtcagtattacgtttgatctagaagataatgagtcgttcaaggtttcgtattctggagac
actcgtcccaaccccaaatttgtcgatatcggtcgcgatagtgatcttttgattcacgag
tcttccttggacaatgagcttattgaggaagccattgctaagaaacactcgacgatgatc
gaagcaatcaatgtggcgcgctacatgaactgttcgaaactcatcttgacccacttcagt
acaagatactcgaacaagactaatacggttcgaaactcggaagcgttgatagccttgtcg
cagagtttaaacaactacttgaccaagtacagagtgtcgcccaacattttcgccttagag
ggccaagcgtatcccatcaagtcgtacgacgagttggacatctgctacggctacgacttt
atgaactataggttcaaggatcttcatctccagaagcagaaaatggatttgatctacgat
acgtttgaagcggaagaagacgacgacaagaaggagagagaaacgctgaaacaaagagaa
aaacaggaggtgagaaggatgcagcgcttacagtccaaaaacagtgtccacaagaagaga
aaagtcagtggcagcgaagatgaagaggaccagtag
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