Scheffersomyces stipitis: PICST_65304
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Entry
PICST_65304 CDS
T01023
Symbol
GCR3
Name
(RefSeq) GCR3 protein
KO
K12882
nuclear cap-binding protein subunit 1
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
pic03015
mRNA surveillance pathway
pic03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
PICST_65304 (GCR3)
09122 Translation
03013 Nucleocytoplasmic transport
PICST_65304 (GCR3)
03015 mRNA surveillance pathway
PICST_65304 (GCR3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_65304 (GCR3)
03041 Spliceosome [BR:
pic03041
]
PICST_65304 (GCR3)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
PICST_65304 (GCR3)
Spliceosome [BR:
pic03041
]
Common components
Common spliceosomal components
Cap binding complex
PICST_65304 (GCR3)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
Motif
Other DBs
NCBI-GeneID:
4837289
NCBI-ProteinID:
XP_001382688
JGI:
65304
UniProt:
A3LQD0
LinkDB
All DBs
Position
2:<2417287..2420183
Genome browser
AA seq
941 aa
AA seq
DB search
MDSYNPGKRSRDDFESDNYAAPQQQFEDENAESKRQHVDPTQELINNVCKDIRRLGENPN
IANQVADVSYISNPIVAEFEKIDNLRNAILSTIYAVIIEQPQKINALSNLILICNSKNFV
VAKYVIEYLHAKAQTLLDSIAPKKEEADEDVDEEDAGVFNNLKSILKFLATLAPIIEGYS
IINIFKQFLKLAIDLQNETPDNRNGTAQEIFYNSLIAVPYLFSNDFSQELIDQVNELVAL
AKDFKIVESATNTLLQPFDSKLDNYKLPYEPVKMIDLIYNAILTLQGEEKDWVNLKHKLF
LDFSELLASIIEEALQNNPISNALVKHQLPQLSLPTIAQVQEYKPVGSIDKLWKENSRVL
FQVYNSTEFETVPRIDSYFGLFFKDLSFDILTNLSFNKNEASIQLSILDLFFSKDLFAPP
GSSIDSLTMIHEDNKSGENVPPLSTWKIEDIAVESILTMIFQLPVTLYREIYYYTVLISC
CRESPESIAPVFGRAIRYFYNNLETLDYELKLRFLDWMTTQISNFEFSWKWDEWVADSQK
FKHLRHHPKKNFIKNLIAKEVRLSNKNRIKDSFVAVNPETSEMVNLEEFYQYLNISLFED
ETKFILDYDTALYNQEGTREILEKIHLEKREQLAAKPAVFAQEEIFFNFSLPELPLHGVA
SKVYDFVVAHWKPNTDFDELCKEILEATKEFPDINGIKFMINLIFQTYAYIGSRSIYSVV
SILSRDVNKLKYLSGSPIEYTEQEPKFEEQEISPEEITDRQNWIIESIFRVWIHQPQEVF
LILEYLIEFGILKPENLVLKTLDLENNLILENVSCMESMNRVLFNSSIATDKGDSFKKLI
LLLFNAITRNLNAISGELQEDKNEIIKITKDIEDPEALEVSKRIDQEWLFYEYKGLLKSY
FRRYIKNSEIDYLSDIREIFDTIENVPAKDDMLQWLDEVSP
NT seq
2826 nt
NT seq
+upstream
nt +downstream
nt
atggattcgtacaatcccggtaagagatcgagagacgatttcgagtcggacaattatgca
gcaccgcagcagcaatttgaagacgaaaatgctgagtccaagagacagcatgtggatcca
acccaggaattgatcaacaatgtgtgtaaggatatccggaggttgggagaaaatcccaac
atagccaatcaggtcgcggatgtttcgtatatttcgaatccaattgttgctgaatttgaa
aagatcgacaatttgagaaatgccattctcagtactatctatgctgtgattattgaacaa
ccacagaagatcaatgccttgagcaacttaattcttatctgtaactccaagaatttcgtt
gttgccaaatacgttattgaatatttacatgctaaagctcagacgttgttggactctatt
gctcctaaaaaagaagaagctgatgaagatgtagacgaagaagatgctggagtgttcaac
aacttgaagtctattctcaaattcttagccactttggctcctatcattgaaggatattcg
attatcaacatattcaaacaatttttgaaacttgcaattgatttgcagaacgaaacccca
gacaacagaaatggaactgctcaggaaatcttctataacctgttgattgccgttccttac
ttgttcagcaacgacttttcgcaggaactaattgaccaggtaaacgagttagtcgcttta
gccaaagacttcaaaatcgtagaaagtgctacaaacaccttgttacagccttttgactca
aagctcgacaattacaaattgccttatgaaccagtcaagatgattgatttgatttacaac
gccattcttacattgcaaggtgaagaaaaagattgggtcaacttgaagcacaagcttttc
ttggatttctccgagttgttggcttctattatcgaggaagcattgcagaataaccctatt
tcaaatgccttagttaagcaccaattacctcaactttctttgccaacaattgcacaagtt
caagagtacaagccagtgggttcgattgacaagttatggaaagaaaattctcgtgtcttg
ttccaagtctacaactccactgagttcgaaacggtaccaagaattgattcttactttggt
ttgttcttcaaggatctttcgtttgacattttaacaaacttatcgttcaacaagaatgag
gcttctatccaattatccatcttggatttgttcttctctaaagatttgtttgcccctcca
ggatcttctatcgacctgttgactatgattcacgaagataacaaatctggtgaaaacgtt
cctcctttgtcgacttggaaaattgaagatattgctgtcgaaagtatcttgacgatgatt
ttccaattgccagtcacattataccgtgaaatctactattatacggtgttgatttcctgt
tgtagagaaagtccggaatcaattgctcccgtttttggaagagccatcagatacttttac
aataacttggagacattggattatgagttgaagttgagattcttggattggatgactact
caaatttccaacttcgagttcagctggaagtgggatgaatgggttgctgattcacaaaag
ttcaaacacttgagacatcatccaaagaagaattttatcaagaatttgatcgctaaagaa
gtcagattatcaaacaagaatagaatcaaagacagttttgtggctgtcaatccagaaaca
tccgagatggtgaacttggaagaattctatcagtacttgaatatctctctttttgaagat
gaaacaaaattcattttggattatgacactgccctatacaaccaagaaggcacgagagaa
attctcgaaaagattcatctcgaaaagagagaacaattagctgctaagccagctgtattt
gcacaagaagagatcttcttcaacttctcccttcctgaattgccattgcatggtgttgcc
agtaaagtgtatgactttgtcgttgctcattggaagcctaacactgatttcgacgagttg
tgcaaggaaattcttgaagctaccaaggagttccctgacattaatgggattaagttcatg
atcaatttaatattccaaacatatgcctacattggatctagatccatctattcggttgtg
agtatcttatctcgtgacgtcaacaaattgaagtacttgagtggctctcctattgaatat
actgagcaggagcctaaatttgaggagcaagagatttctccagaagaaatcactgacaga
caaaactggatcattgaatccattttcagagtgtggattcatcaaccacaagaagtattc
ttgattcttgaatatttgattgaatttggaatcttgaagccggagaacttggtcttgaag
accttagatcttgagaataacttgattctcgagaatgtttcttgtatggagtccatgaac
agggtgttgtttaacagttctattgccacggacaaaggcgactcattcaaaaaattgatt
ttgctacttttcaatgcgattacacgcaacttgaatgccatctctggtgagcttcaagaa
gataaaaatgaaatcatcaagattacaaaggatatcgaagatccggaagcattggaagta
tcgaaaagaatcgaccaggaatggctcttctacgagtacaagggccttttgaagtcgtat
ttcagaaggtatatcaagaacctggaaattgactacttgagcgatatcagggagattttc
gacaccatcgagaatgttcctgccaaggacgatatgttgcagtggctcgatgaagtcagc
ccatag
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