Scheffersomyces stipitis: PICST_65421 Help Entry PICST_65421       CDS       T01023                                  Name (RefSeq) predicted protein   KO K12604   CCR4-NOT transcription complex subunit 1 Organism pic  Scheffersomyces stipitis Pathway pic03018   RNA degradation Brite KEGG Orthology (KO) [BR:pic00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     PICST_65421  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:pic03019]     PICST_65421 Messenger RNA biogenesis [BR:pic03019]  Eukaryotic type   mRNA surveillance and transport factors    mRNA cycle factors     P-body specific factors      PICST_65421   mRNA degradation factors    3'-5' decay     Ccr4-NOT complex      PICST_65421 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  Not1 CNOT1_CAF1_bind CNOT1_HEAT_N CNOT1_TTP_bind DUF3819 CNOT1_HEAT ARM_Cnot1 NOT1_connector DUF2420 Motif Other DBs NCBI-GeneID:  4837750 NCBI-ProteinID:  XP_001383782 JGI:  65421 UniProt:  A3LRK4 LinkDB All DBs Position 3:complement(770743..777219) Genome browser AA seq 1911 aa AA seqDB search MSFKELLSEIGPENILPDKLLPALLQIKPNEVDQSVALLLSEILIPGSQGLPSSLTFVNN LPEANAKGAQLQACFRSIEGTNNFAINWYEVFSHVHQNLFDSQQRNIQPTVTSITQILSS LDFKEGLIDIFLNYEWWFNKTLLYLLQTMDPQQGAYDITLSKNVSFCFEDDKNSQSTPQQ ASARRNILKFVSIGKLELSVLTKIQQQQSQQLSEPERKLNLYLNHLFEHDYRSFPEYLIA AALTLPEKTQFLNDLVDTLFTLLNDSDSPALEKVILKFKELSPNLAASKLVNYYNSKKTI DSIGKILDVASSVGLLDTVVNEAWNADAKIGMKFLIESTLHDFDYKSFFDAKLGEPNRKA TVYQALLESLEERAQRDYDKGQAASGSAATPGQTPVDPTKLLKIPFVYSFLEKLKSNGGL VDSEQLKNLQLLLLTTYPRLINFGNGHDETILANAENSNFFPPDVEQEMKSYYSKMYNKE TEIKDIVDMLVRMKASDDPHQQDVFACMIHSLLDEYRFFSEYPLSALASTSLLFGALLEK DLIQGTTLTVALNFIWESCNQPQDSHLFKFAVQSLYNFKSRLHEYPIYCKHLLECRSLSA HAKMYQIVKDAANGIPCGQTVTSTPEVGPRYQSITVSDKTIGFVKQEEPPETISDKLLFF VNNMTEDNLKVSEVKDLLTENYFAWFSNYLVVDRAKAEPNNQGLYATLIEEIDEPILLEY VLNVSLKEVERLIRNAKDARNERNQLKNLGQWLGKITLANDKPLRRDQIALKFLLVEAYD FKSLPLIIPFVCKILDQAQYSKVFRPPNPWVLGIIKVLAELYKTADLTLNLKFEVEVLLN SFKMKISDVEPSTLIEVHNPNPASLAAMFGIHPETVTLANDISRLSLEGAHPLEQLQPRQ FPAALTQQVVQDSLPPQSALLPQLQPAFKDQPPQQQQAQQQDTGLDTSFSNLIGNSIYTQ HANLRRAFQASLSRAVRECAVPILSRVSEAVLTTTESLINKDFATERDAFKFRRSYQNMA QQLSHSMVLCSGRKLLAETIEATMLQLLGNNASELPLEELNAAIQANVGLCVEIVDKIAS DNIAELIDERMQRFVQAREQHNAAEPYFDSTGNEYSLQLPEPLGLSKEGLSANQLSIYET FGSGSSTEVTPPQPEVSLSQPTAVVQEDSIPVDQLFTAITQSCEKAIQLLSDVTETKLSD LSPSHPIMQSLTQALGIAQANAIKYPELLLKAAQYAVNCLFTQVHDNPMCNEIYVVFLDK LCEYSPSTAKDVTWWLVHSSDQRKFNMPVIFSLLKVQLVSPTKLDSSIGRLINESNNPVV VKFAATLLLNVYSSTELRPIALRSEFGFTLDALNKYAGDDATEEDKQAKLARDNLIELLN RPTAPVSNQLYSQLGYVFAEWVKLLTHGEKSQDLEEQFIKGMLDTEILTDPTYFQVFFKA AIEISVAAFAAEHEIRSRTLRESYLAVDTLAMLIVRIVSQFDENEEAIDYLKKIISVILL VLANDHETAKANWNERAYFRFFSSLLSSWTDLTSVEGSELSAELNQEFYLYIGEVFNALQ PIIYPGLTFAWVSLIAHRSFLPKLLELPDGAGYQTAVKLLSDLLKFQCVYGKDSNHDVVN VIFKALNRIFTGLLHDYPDFLVECHYQLVTAIPKGYTQLKNIVLSATPASVSVPDPFTRG LKVERLPEINDSPVVAYKPVDDLSKVGLKKPVDNFLRIPAPALMRTIYGGIKLNHPKEIS ESEVVHYNVKLVNALVLHVGISAVADRLPNNVRGFNTKSSQVALLVDLMNQGSSEFKFHL INAIANQLRYPNSHTHWFIGIILHFFSSNSIWGTAAAKATIQELITRVLLERRIVNKPHP WGLTIVFTELVKNGDYGFFDLPFVQDTTPELKNIFDSLSKNVKGSTPTSEN NT seq 5736 nt NT seq  +upstreamnt  +downstreamnt atgtccttcaaagaattgttatcagaaatcggtccggaaaacatattgcccgataagttg ttaccggctttactccaaattaaacctaatgaggtagaccaaagtgtagccttgctcttg tcggagatcttgatcccaggatctcagggcttgccttctagcttgacgtttgtgaataac ctacctgaagccaacgctaaaggtgctcaattacaagcctgcttccgttctatagaagga acaaataatttcgccataaattggtacgaagttttctcgcatgtgcatcagaacttgttt gattcgcagcagaggaatatccagcctactgtcactagcattacgcagatcttgtcgtca ttggacttcaaagaaggtctaattgatatcttcttgaactacgagtggtggttcaacaag acattattgtatttgttgcagaccatggatccccagcaaggtgcttatgatatcacttta ctgaagaacgtatcattttgcttcgaagacgataaaaactcgcagtctactccacaacaa gcatctgctaggagaaacatcttgaagtttgtcagtattggtaagctagagcttctggtg ttgaccaagattcaacaacaacaactgcaacagcttagtgaaccagagcgaaagttgaat ctttatttgaaccatctctttgaacacgactacagaagctttccagaatacttaattgct gctgctctcactttgccagagaaaacgcaattcctcaacgaccttgttgatactttattc actttgttgaacgatagcgatagcccagccttggaaaaggtaatcttgaagttcaaggaa ttgagtcctaatttggctgcttcaaagttggtaaactactacaactccaagaagactatt gattcgatcggaaagatactagatgtcgcctcttctgtgggattgcttgacactgtggtg aatgaagcatggaacgcagatgccaaaattggtatgaaattcttgattgaatcgactctc catgacttcgactacaaatcgttcttcgatgccaaactcggagaaccaaatcgaaaagca acagtctaccaagctttgctcgagtctttagaagaaagagcgcagagggactatgacaag ggccaagccgcgagcggctctgcagctactcctggtcaaacacctgtagaccctactaag ttattgaagattccttttgtgtacagttttttggagaagttgaagagcaacggtggatta gtagactcagaacaattgaagaatcttcagttgctccttttaacaacgtatcccagattg atcaactttggtaatggtcacgacgagacgattttggcgaacgctgaaaactcaaatttc ttccctcctgacgtagaacaggaaatgaaatcgtattattccaagatgtacaataaggaa acggaaatcaaggatattgtagacatgctcgtgagaatgaaggccagcgacgatcctcac cagcaagacgtctttgcttgtatgattcactctttacttgatgaatacagattcttctct gagtatcctttgtcagctttggcatcaacctcattactttttggtgctcttttggagaag gacttgattcagggtaccactttgacggtggctttgaacttcatctgggaatcttgtaac caaccgcaggactcccatttattcaagtttgcagttcaatcattgtacaacttcaagtcc agattacatgagtatcctatttattgtaagcacttattggagtgccgttcgttatctgca catgctaagatgtaccagattgttaaggatgccgccaacggtattccatgtggccagact gttacgtcgactcccgaagttggtccaagataccagtcaataactgtttctgacaagact attggctttgtcaaacaagaagaaccaccagaaacaatctcggacaagttgcttttcttt gtcaacaacatgacagaagacaacttaaaggtttctgaagtgaaggacttattaactgag aattactttgcctggttttccaactacttagtggtggacagggccaaagctgagccgaac aaccaaggtttgtatgctactttgattgaagaaattgacgagcctattctcttggagtat gttttaaacgtctctcttaaggaagttgaacgtttaattagaaatgccaaggatgccagg aacgaacgaaaccaattgaagaatttggggcaatggctaggtaaaattactttggctaac gacaagcctttgagaagagaccagattgccttgaaattcttgttagttgaagcttatgac ttcaagtcgttaccattgattattccatttgtttgtaagattttggatcaagctcagtac tcaaaagttttcagaccacccaatccatgggtcttgggtatcatcaaagttttagcagaa ctttacaagactgctgatttgactctcaaccttaaatttgaagtcgaagtgttacttaat tctttcaagatgaagattagtgacgtcgagccttctaccttgattgaagtacacaatcca aatccagcctcattggctgcaatgttcggtattcatccggagacggtgacattggccaat gacatttccaggttgagcttagaaggagcacatcctttggagcaattacagccccgtcaa ttcccggcagctcttactcaacaggttgtgcaagactcacttccaccccagtctgctctt cttcctcagcttcaacctgccttcaaggaccaacctcctcaacaacaacaagctcagcaa caggacactggattggatactagtttcagcaacttgattggaaacagtatttatacccaa cacgctaatttgagaagagccttccaagcttctttatctagagccgtccgtgaatgtgct gttccaatcttgagcagagtctctgaagctgttttgacaacaaccgaatcccttatcaat aaggatttcgctaccgagagagatgctttcaagtttaggagaagctaccagaacatggca caacagttgtcccatagtatggtgttgtgcagtgggcgtaagcttttggctgagactatt gaagcaactatgttgcagttgttaggtaacaacgctctggaattgcctttagaggagttg aatgcagccatccaagccaatgtcggattgtgcgtagaaatagttgataagattgcttct gataacatcgcagaattgatcgatgagagaatgcaaagatttgttcaagcccgtgaacag cacaatgctgctgagccatatttcgattccacagggaatgagtattcattgcaattacca gaacctcttggtttaagcaaggaaggtcttagtgccaaccagcttagtatatacgagact tttggcagtggtagcagtactgaagtcacacctccacagccagaagtgtctttgtcgcag ccaactgctgttgtacaagaagactctattcctgttgaccagctcttcacggcaattact caaagctgtgaaaaggctatccaattgttgtcggacgtgaccgaaaccaaattgtcagac ttgagcccaagccacccgattatgcaatctttaactcaagcacttggtattgcgcaggca aatgccatcaagtacccagaattattgttgaaggcagcgcagtatgctgtgaactgtctt ttcactcaagttcatgataacccaatgtgtaatgagatctacgtcgtctttttggacaag ctctgtgagtactctccttccacggccaaggatgtcacttggtggttggttcactcttct gaccagagaaagttcaatatgcctgttatattctctttgttgaaggttcaattggttctg cctactaaacttgattcatctattggtagactcatcaacgaatccaacaatcccgttgtg gtcaaatttgctgccactttgctcttgaatgtctacagttcgactgaattaagaccaata gctttgagatctgaattcggctttaccttagacgccttgaacaaatacgcaggagatgat gctactgaagaagacaaacaggctaagttggctcgtgacaacttaattgagttgttgaac aggccaactgctcctgtttcaaaccagctctacagtcagttaggctatgtatttgctgaa tgggttaagttattgactcatggtgaaaagtctcaggaccttgaagaacaatttattaaa ggaatgttggatactgaaattttgactgatcctacttatttccaggttttctttaaggct gccattgagatctcagtagctgcatttgcagctgaacatgagatcagatccagaacactt cgggaatcctacttggcagtcgatactcttgcgatgttgattgtgagaattgtatctcaa ttcgatgaaaatgaagaagctattgattacttgaagaagattattagtgttatcctcttg gtcttggcaaacgaccacgagactgctaaggccaattggaatgaaagagcatacttcagg ttcttctcatctttgttatcttcctggactgatttgactagtgtagaaggtagcgagtta agtgcagaattgaatcaagaattctacctttacattggtgaagttttcaatgctctccag ccaataatttatcctggtctcacttttgcatgggtttcgttgattgcacatcgtctgttc ttgcccaagttgctagaattgcctgatggagctggctatcaaaccgctgtcaagttattg tcggatttgcttaagttccaatgcgtttatggaaaagattccaatcatgatgttgttaat gtcattttcaaggcactcaaccgtatcttcactggtttgcttcatgattatccggacttc ttggttgaatgccactaccaattggtcactgcaatcccaaagggctacacgcaattgaag aacattgttctctctgctactcctgctagtgtatcggtaccagaccctttcaccagaggt ctcaaggttgaaagattgccagaaatcaacgattctccagttgtagcttataagccggta gacgatttgtcgaaggttggcttgaaaaagccggtagacaatttcctccgtattccagcg ccagctttgatgagaactatttatggaggtattaaattaaaccatcctaaggaaatcagc gaatcagaagtggttcactacaacgtcaagttggtcaatgctttagtgttgcatgttggt atatcagctgtagccgacagattgcccaataatgtcagaggtttcaatacgaagtcgtca caagtagcattgttggttgatttgatgaatcaaggctctctggagttcaaattccatttg attaatgccattgccaaccaattgcggtaccctaatagccatactcattggtttattggt attatattgcatttcttttcatccaactccatctggggaactgctgctgccaaagctact attcaagagttgatcacgagagtgttgttggagagaagaattgtgaacaaacctcatcca tggggcttgactattgtctttaccgaattggtgaagaatggcgactatggtttctttgac ttgccctttgtccaagacaccacgccagaattgaagaatatctttgactctttgtcgaag aatgtcaagggctcgactcctacttctgagaattga

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