Scheffersomyces stipitis: PICST_66088
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Entry
PICST_66088 CDS
T01023
Name
(RefSeq) predicted protein
KO
K15560
protein NRD1
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pic03021
]
PICST_66088
Transcription machinery [BR:
pic03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
PICST_66088
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nrd1-Seb1_dom2
CID
RRM_1
CTK3
Motif
Other DBs
NCBI-GeneID:
4840793
NCBI-ProteinID:
XP_001386341
JGI:
66088
UniProt:
A3LZB6
LinkDB
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Position
7:complement(750325..752627)
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AA seq
614 aa
AA seq
DB search
MSSVEEFESILKELPTLKAPGVSGTRIKKLTELAVKNIDQESSLITLLYSNCKAAPSSHK
LGTLYVVDSIVRAYLEEAKKQNQVVESSAPEGTFASGVFKISELIESLIDDALELSITQA
QNIKISKLVDIWERAETFSHDIIVRIRQKHFTSTTPPGSPPRAAGEIAKPTGEATSATAE
KTDSTSILSALASLAKTSSPGSQNTQPAENKANTILSQLSALSAPQGASQPNFAPRPQQG
QGGNEQLIFNMLQQMQQGGSGSAPPPNIPSIPQQPPRNDYGSDRRRREQDNGYSRRNRSR
SPPGNRYGGVRSPPRQHESMSYNRSGPGGDLNVPGTPHYRPRNVGFDQSLPQGSFKVLSR
TLFIGGVPRNMDDQALAHMLSPFAEVQSVILNSERKHAFVKVYSRREAEQVIGQFNKDNA
MPLRTRWGVGFGPRDCCNYQHGISIIPIQRLTDADKTWVVNAQWGGTGGQPLSSGMVIDE
PDIEIGAGISSKAMSKKMPTNSARNGPKSNRPGEPDEEYAKTTLLPHQAGHMSHGAQPDF
NTFTQSSVNPLSGLFANSESDSQSQSRPPQGFNQPSQPQGQGFPDFLNNLQQQGGNPNLS
ATLANLFQQGGNQQ
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtccgttgaagaattcgaatccattttgaaggagttgcctactttgaaggctccc
ggagtttctggtactcgtatcaagaagttgacagaattagcagtcaagaacattgatcag
gagtcctcgttgatcactctcttatattccaactgtaaagcagctccatcatctcataaa
ttgggaaccttgtatgtggtagattccattgtaagagcctatttagaagaagccaagaag
cagaaccaggtcgtcgagtctctggctccagagggcacttttgcttctggtgtattcaag
atcagtgaattgatcgagtcgttgattgacgacgcattggagttactgattactcaggct
cagaatatcaagatcagcaagttagtagatatctgggaaagagctgaaactttcagccat
gacatcattgtcagaattagacaaaagcactttacttctactactcctcctggctctcct
ccaagagctgcgggagaaattgctaagccaactggcgaggcaacttctgcaactgctgaa
aagacagattcgaccagtattttactggctcttgcctctttggccaaaactagctctcca
ggttcgcagaatactcagcccgctgaaaacaaggccaacacaatcttatcgcaattatca
gctctctctgctcctcaaggtgcatcacaaccaaattttgctccccgtccgcagcaaggt
cagggaggaaacgaacagttgatcttcaatatgttgcaacaaatgcaacaaggaggctcc
ggatctgcacctcctccgaacattcctctgattccccaacaacctcctagaaacgactat
ggatcagatagacgcagacgtgagcaagataatggctactctcgtagaaacagatctaga
tctcctccaggtaacagatacggaggagtcagatctcctcctagacaacacgaatcaatg
agctataatcgtagtggtccaggaggtgatcttaacgttccaggaactcctcattatcgt
cctagaaatgttggtttcgaccagtctttgcctcagggttctttcaaggttttgtctaga
actttattcattggtggtgtcccacgcaacatggacgatcaggctttagctcacatgttg
agtcctttcgctgaagttcaatctgttattttgaacagcgaaagaaagcacgctttcgtc
aaggtttactcgagaagagaagctgaacaggtcattggacaattcaacaaggataatgct
atgcccttgagaactcgttggggtgttggttttggacctagagactgttgcaactaccaa
catggtatttccatcattcctatccagagattgactgatgcagacaagacatgggtggtc
aatgctcaatggggaggaactggaggtcaacctttgctgagcggtatggttatagatgag
cctgatattgagattggtgctggtatttcttctaaggccatgtccaaaaagatgcctacc
aattctgccaggaatggtcctaagtcaaatagaccaggtgagccagatgaagaatatgcc
aaaactactttgcttccacatcaagctggccacatgtctcacggagctcagccagacttc
aacacattcacgcaatcatctgttaacccattatctgggttgtttgccaactctgagtca
gattcgcaatcgcaatcccgtccacctcaaggatttaaccaaccttcacagccacaggga
cagggatttcccgattttttaaacaacttacaacagcaaggtggcaaccccaacttgagt
gccactttagctaacttgttccaacaaggtggaaaccagcaatag
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