Scheffersomyces stipitis: PICST_66248
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Entry
PICST_66248 CDS
T01023
Symbol
SMY2
Name
(RefSeq) kinesin-like protein
KO
K18730
PERQ amino acid-rich with GYF domain-containing protein
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_66248 (SMY2)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
PICST_66248 (SMY2)
Surveillance factors
Other surveillance factors
PICST_66248 (SMY2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GYF
GYF_2
Motif
Other DBs
NCBI-GeneID:
4850850
NCBI-ProteinID:
XP_001387283
JGI:
66248
UniProt:
A3GF01
LinkDB
All DBs
Position
1:223638..226611
Genome browser
AA seq
926 aa
AA seq
DB search
MISRTQRKSQLEFTNGNSVSGSTVESTDFSLSSLPTSTSIPPTPNSGQVPYTIPPNRGSK
RYSLNEVFDVWYTNKENIVNPAIELPVLSHESYKLHKPRQIYHLDLQPTSAPSFVSSDSA
NSDSVASSASNSDYPLTSTVDSASVAAGNPSGNSGANLSGNLSSSGISSNGISAVSAEKS
ILPSLTSGEIDNSTFNSTLASLSLNESPGTFQAQAQTQAQTQTSTPSASSHPPPGMTSTL
QNINAVPLLTSDKINWFYVDPLGTEQGPFNGDTMQEWLTGGYLHLDLNIRRLEESSYRPL
KELCEKVQNYIQPFKVPLPDLTVRSAPVAETRPSFPPFGSQGQVPQFSSLGQQQQQQSQF
HPLLSGGPNLGRINSGLGHSQQQSGLFGNDFMSNDPFSAQGFQNSPGANQFGIDSINRNL
GFNSGLQINTMPALLQSQIQQQQSQPGLSRNNSGWGSLDHSTGLMSNSNPATPLSVNPVL
PGQITQPTPISPWISGGIQSSSRVSSPFVASSTISNNNSNSNNNVSSAEVIDTVAADDVV
VNDDHVLSNMHSSVVNDFLDDDHFKQEVPAPALATEKSEKTENSEPAVNEQQAKAGPEQE
AEPEQELEDEEIVSAPVVETLKPSVPNQQELAPWASSKNPEAEQKPAMTLKEIQQLEAER
LEKQKQLLAQQRAEVNRAWAQAEEKAAAEQKVPALPPTTSWGAVPVQTVAKKTLAEIQKE
EAEAAAARAKAAKASAAASGLPVQKASFASALTASSTPKDDGVWQTVAVKKPTVKKPVAP
SITNAASSSRATPQVLRSVSATRPAVSGSNSLALREDFLIWARSNMTNLYPTVSKDDLLD
MFITLPASSSDSGALIAETIYASSATMDGRRFAQEFLKRRQKVDQQIGKDDDVSWSSAII
SSADKLTTVDEDGWSTNVKSKKKKRT
NT seq
2781 nt
NT seq
+upstream
nt +downstream
nt
atgatctccaggacacaacgcaaatcgcagctcgaattcacaaacggaaactccgtttcc
ggctccacggtagaactgaccgatttctcgctctcttcgcttcctacttcgacctcaatt
ccacccacgccaaactctggccaagtcccttacaccattccacccaacagaggcagcaaa
cgttattctttgaacgaggtttttgacgtgtggtacaccaacaaagagaacatcgttaac
cctgctatcgaacttcctgtactttcgcatgaatcatacaagctccataaacctcgccaa
atctaccatttggaccttcagcctacgctggctccgtcgtttgtgtcgtctgattcggcc
aactcagattcagtagcctccagcgcttccaactcagactaccctttaacttccactgta
gattccgcttcagtagcagctggaaatccatctggaaattctggtgcaaatttgtctgga
aatttatctagtagtgggatttctagcaatggtatttccgctgtttcggctgagaagagc
atcttgccgtctttgacctcaggtgaaattgacaattctaccttcaactcgactttggca
tcactttctctcaacgagtcccctggaacgtttcaagctcaagctcagactcaagctcag
actcaaactctgacaccttcagcttcgtctcatcctcctcccggaatgacttccactctt
cagaacatcaacgctgttcctcttcttacgtctgacaagatcaactggttctatgtagac
ccacttggaacagagcagggtcccttcaatggagatacaatgcaagaatggttgaccgga
ggctacttgcacttggacttgaacattcgtagattggaagaatcgtcctacagacctctc
aaagaactctgtgaaaaagtccagaactacatccaaccattcaaggtacctcttccagac
ttgaccgttcgttctgctccagtggccgagaccagaccgctgttccctccatttggatcc
cagggccaggttcctcagtttagctctcttgggcaacagcagcaacaacagtcgcagttc
catcccttgttgtcaggaggccccaaccttggcagaatcaactctggacttggccatagt
caacagcagtcgggattgtttggcaacgatttcatgtccaacgatcctttttctgcccag
gggttccaaaactctccaggagctaaccagttcggaatcgactctatcaaccggaacctc
ggcttcaacagtggcttgcagatcaacaccatgccagccttgttgcaactgcagattcaa
cagcagcaatcacaacctggtttgtcgagaaacaacagtggctggggcagtttggaccat
tccaccggtttgatgagtaacagtaaccctgcaacgccactatctgttaacccggtgttg
cctggccagatcacccagccaaccccaatatctccatggatttctggtgggatccagtcc
ctgtccagagtcagctcaccctttgttgcatctagcactattagcaacaataacagcaat
agcaacaataacgtaagctctgcagaagtgatcgacactgttgctgccgacgatgttgtg
gttaacgatgaccatgttttgagcaacatgcattcttctgtagtgaacgacttcttggac
gacgatcatttcaagcaagaagtcccagccccagctttagctactgaaaagtcggaaaag
actgaaaattcagagccagctgtcaatgaacagcaagcaaaggcaggaccggaacaagaa
gctgagccggaacaagaacttgaagacgaagaaattgtttccgctccagtggttgaaacc
ttgaagccttcggtgcctaaccaacaagagttagctccatgggccagcagcaaaaatcca
gaagctgaacaaaagccagccatgactttaaaggaaatccagcaattggaagcggaaaga
ttggaaaagcaaaaacaattgcttgctcaacaaagagccgaagtcaaccgtgcttgggca
caggcagaggagaaggctgctgctgaacaaaaggtgccagcacttcctccaactaccagt
tggggtgctgttcctgttcaaactgtagccaaaaagacattagctgaaatccagaaagaa
gaagccgaagctgcagctgccagagccaaggctgccaaggcatctgctgctgcgtcgggt
cttccagttcaaaaagcttcattcgccagtgctttgacggcatcatctactccaaaggac
gatggagtgtggcagactgttgctgttaagaagccaacagttaagaagccagttgctcca
tctattaccaatgctgcttcttctagtagagccacccctcaagtattgagatcggtttca
gctacgaggccagctgtctctggcagcaactctcttgccttgagagaggatttcttgatt
tgggcaagatccaacatgaccaatttgtaccctaccgtttcaaaagatgatttgttagat
atgtttattaccttgccagcttccagcagcgactctggtgccttgattgctgagaccatc
tacgcttcatctgctactatggatggtagaagatttgcccaggaattcttgaagagaaga
caaaaggtagaccaacagattggcaaggatgacgatgtttcatggtcgtctgcaatcatc
tcttctgctgacaagttgactactgttgatgaagacggctggagcaccaacgttaagtcc
aagaagaagaagagaacttga
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