Scheffersomyces stipitis: PICST_66276
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Entry
PICST_66276 CDS
T01023
Symbol
ELP1
Name
(RefSeq) RNA polymerase II Elongator subunit
KO
K11373
elongator complex protein 1
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pic03016
]
PICST_66276 (ELP1)
Transfer RNA biogenesis [BR:
pic03016
]
Eukaryotic type
tRNA modification factors
Elongator complex
PICST_66276 (ELP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Beta-prop_ELP1_1st
Beta-prop_ELP1_2nd
A-sol_ELP1
TPR_ELP1
HB_ELP1
TPR_GEMI5
IF-2B
Beta-AFase-like_GH127_cat
DUF5749
Motif
Other DBs
NCBI-GeneID:
4850907
NCBI-ProteinID:
XP_001387720
JGI:
66276
UniProt:
A3GF58
LinkDB
All DBs
Position
1:complement(401355..405495)
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AA seq
1354 aa
AA seq
DB search
MRNLIVLNRGTIDPQSRTYPDLALVDSVFDTVSDSITIVLYSEESATIEVQQFMKNEQVL
VLASFPISDPSSKLLSFNHFVDSAQLVFVLSNGDLITASYDMSNPEYDTTIVEIVGSIDV
GLLASQWSPDEETLAIVTVENKLLLLSRLFEPLSERELDPNDIKITDSKHVAVGWGKKET
QFKGRGFKALEREKEALKHAGLELKEDTPLRDPTVAEVEQGTLSQFDDFSTKISWRGDCE
YFAVTTTESVLVEDIGDMYDRRVVRVFTREGELDSVNEAVDGLEHNLAWKPQGALIASTQ
RHVDPDGDQALDLVFYERNGLRHGQFNTRLNPFTEGINGLDWSSDSEILLIQLHNRVQLW
TSKNYHWYLKQELHINQSLVPENQVIFAKFHPEKPLHLMIGTSHSGIQVVDLALRVVTGP
THIGHDLGMTLVTDGNIAKITPLSIANVPPPISFRELEVEDPISDLAVSKCNEKYAILTS
TNDVYLSHFAIADAKNGKHPKIASKISSNLIITDNNEVAKQIAFIKDSLVLIAVDGVGYT
KVVAFEVDDIANPTFNESIDVSPKLVIMKSSADFEAVTAEAVDGTIYLINAAQDIDEICK
FPQLCRDYELVTTPGDEYSGNKHTAFGLSSNGKLYAGETQVASAVTSIKVTESHLLFTNA
QSQLCFIHLATANGKFDYEVYQNTTTESVDERVRQIERGSWLVNAMPSKYSVVLESPRGN
LETICPRIMVLSGVRKFIKEKNYKDAFLACRTHRIDLDILHDYDPELFFSNVEFFVKQIK
KVEHLDLFVSCLHEEDTSKSKYRETIHETGPVLDKLNQLSISQSKAQTQAQTPEPQDVHN
TVKRIIRNKEVVEDFKDSKINRICEAILSVLLKPEYFQTYLQTIITAYACEKPPNLSAAL
KLIGGFENPEQVEQSVTHLCFLQDVNKLYNTALGLYDVRLTLAISQQSQKDPKEYLPFLQ
NLHIQKELRRKFLIDDYLKNYEKALDSLHQEGEDSEQEFDDYVVAHSLYKYALNIYKYDD
KRSNDVLRLYADYLNHQQNFAEAAISYEYLGDFENALENHILGKKWKEALAITERPEYSS
KMVVTAERLVSSLTEDHKYAEAAVIEFQFLGNLEEAIKLYCKNYYYDEAILLSFKQKKPE
LIETVVDTQLNEGFGTIAELLADCKGQMNSQLRRLRELRAKKAEDPYSFYGVPDELDTPD
NVSVAASETSTTPSFFTRYTGKTSGTAKTGASRRTTKNKKREERKRAKGRKGTIYEEEYL
IKSVGRLLERLEQTEPDAIRLIEGLIRRHMKEKAYQIQKNWSELIDFITENVVEIHNMSE
KDRERIDDNGEVYLIPEIPVPTIREFPKKNILDY
NT seq
4065 nt
NT seq
+upstream
nt +downstream
nt
atgagaaacttgattgttcttaaccgaggcaccattgaccctcagtctcggacatatcca
gacttagctctagttgattcggtgtttgacactgtgtccgacagtattactattgtattg
tactccgaagaatctgccactatagaagtccaacaatttatgaaaaatgagcaggtattg
gttttggcatctttccctatatctgatcccctgtccaagttgttgagtttcaatcatttt
gtagactctgcccaattggtatttgtgttgagcaatggggatcttattacagccagctac
gatatgagcaatccagaatatgacaccactatagtggaaattgtaggttccatagatgtg
ggtttgttggcttctcaatggtcacctgatgaagagacgttggcaattgtcactgtagaa
aacaagttattgttactttccagactctttgaacctcttagtgagagggaattggatccc
aacgatatcaaaatcactgactcgaagcatgttgcggtaggctggggtaaaaaggagacc
caattcaaaggaagaggattcaaagctttggagcgtgaaaaagaggccttgaaacatgct
ggcttggagttgaaagaagacacaccattgcgggatcctactgtagccgaggttgaacag
ggtacgttgtctcagttcgacgacttttccactaagattagttggagaggtgactgcgag
tattttgcagttaccaccactgaatctgtgttggttgaagacataggagatatgtacgac
agaagagtcgtcagagtatttactcgtgagggagagttggatagtgttaacgaagctgta
gatggcttggaacacaacttagcatggaaaccacagggtgcgttgattgcctcaacgcag
agacatgttgaccctgatggtgaccaggccctagacttggtattctacgaacgaaacggc
ttgagacatggccagtttaataccagattaaatcctttcactgaaggtatcaacggcttg
gattggtcttctgatagcgaaatcctcttaatacaattgcataatagagtccagttatgg
acatccaagaactaccactggtacttgaagcaggaattgcacattaatcagtcacttgta
cctgagaaccaggttatttttgccaaattccatccagaaaagcctttgcacttgatgatt
ggtacgtcacattcaggcatccaggtcgtcgatcttgccctcagagttgttactggccct
acccatatcggacatgatctcggaatgactcttgtcactgacggaaacattgctaagata
actcctttgtctattgccaacgtccctccaccaataagtttcagagaattggaagtggaa
gatcctatatcagacttggctgtcagtaaatgtaacgaaaagtatgccattttgaccagc
accaacgatgtctacttaagtcattttgctatcgccgatgcaaagaacggtaaacatccc
aagatagccagtaaaatcagtagcaacttgattattaccgacaataacgaagtagccaag
caaatcgcctttatcaaggactctttggtccttattgctgttgatggagtaggttatacc
aaagttgttgcttttgaagtagacgatatcgctaatcctactttcaacgagtctatcgat
gtttctcccaagcttgtgattatgaaatcgctggctgactttgaagctgtcactgctgag
gctgtagatggcaccatatatttgatcaatgctgctcaagacatagatgagatttgtaag
ttccctcagttgtgtcgtgattacgaattggtcacaacacctggagatgaatattctgga
aataagcataccgcatttggtctttcttcgaacggtaaattgtatgctggagagacacaa
gtggcttcagcagttacgtcaattaaggttacggaatcacacttactcttcactaatgcc
caatcgcagttgtgttttatccacttagctactgctaatggcaaattcgactacgaagtt
taccaaaatacaaccactgaatctgtagatgaaagagtaagacagatcgaaagaggctcg
tggttggtaaatgctatgccatcgaagtattctgttgtcttggaatctccaagagggaac
ttggaaactatctgcccaagaataatggtgttgtcgggagtccggaagttcatcaaggaa
aagaactacaaagatgccttcttggcttgtcgaacacacagaattgacttggacatactt
catgactacgatccagagttattcttttctaacgtcgaattctttgtcaagcaaatcaag
aaggtggaacatttggacttgttcgtctcgtgcttacacgaagaagatacgtctaaatca
aagtatagggaaactatccatgaaacaggacctgttcttgataaacttaaccaattgagt
atttcgcaatcaaaagctcagactcaagctcagactccagaaccccaagatgtgcacaac
accgtcaagagaataattagaaacaaagaagtcgttgaagacttcaaggattccaagata
aacagaatctgtgaagccattttgtctgtattattaaagccagaatacttccagacctat
ttgcaaactatcattacagcctacgcctgtgaaaaaccacctaacttgtctgctgccttg
aagttgattggtgggtttgaaaatcctgaacaagttgaacagtcagtgactcatttgtgt
ttcttacaagacgtcaacaaattgtacaacacagctttgggcttgtacgatgtgagattg
actttggctatttctcaacaatctcagaaagatcctaaggaatacttgccattcttacag
aacttgcacattcaaaaggaattaagaagaaaattcttgattgacgattacttgaagaat
tacgagaaggcattagattcgttgcaccaagaaggagaggattctgaacaagaatttgat
gactacgttgtagctcacagcttgtacaaatacgccttgaatatctacaaatatgatgat
aaaaggtcgaacgacgttttgagattgtatgctgactacttgaaccatcaacagaacttc
gctgaagctgctatttcgtatgaatacttgggcgattttgagaatgccttagaaaaccat
atactcggcaagaagtggaaggaagctcttgctattaccgagagacctgaatattccagt
aagatggtagtaactgcagaaagattggtttcttcgttaacagaagatcacaagtatgct
gaggctgctgtaattgagttccaattcttgggcaatctcgaagaagcaatcaaactctac
tgtaagaactattattatgatgaagctattttgttgagtttcaagcagaagaaacccgaa
ttgattgaaacagtagtggatactcaacttaacgagggctttggaacaattgccgagctt
ttggctgattgtaagggccagatgaactcgcagttgagaagattgagagaattgagagcc
aagaaggctgaagatccttactctttctacggtgttcctgatgaattggatactcctgat
aatgtttcggttgctgcttcagaaacctccaccacaccttcattctttactagatacaca
ggtaagacgtctggaactgctaaaactggtgcctctagacgaacaaccaagaacaagaag
agggaagaaagaaagagagccaagggtagaaagggcaccatctatgaagaggagtatctt
atcaagtccgttggccgtttgttggagagattggaacaaacagagcctgatgctatcaga
ttgattgagggtttgattcggagacacatgaaggaaaaggcctatcaaatccaaaagaac
tggagtgagctaattgatttcatcactgaaaacgttgtcgaaatccacaacatgagcgaa
aaagatagagaaagaatcgacgataatggtgaagtatatcttattcctgaaattccggta
cccaccattcgtgaattcccaaaaaagaacatcttggattactag
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