Scheffersomyces stipitis: PICST_66409
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Entry
PICST_66409 CDS
T01023
Symbol
NUP133
Name
(RefSeq) Nuclear pore complex protein involved in poly(A)+ RNA transport, nuclear pore distribution, and possibly in the biogenesis of functional tRNA
KO
K14300
nuclear pore complex protein Nup133
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_66409 (NUP133)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_66409 (NUP133)
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_66409 (NUP133)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PICST_66409 (NUP133)
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PICST_66409 (NUP133)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin_N
Motif
Other DBs
NCBI-GeneID:
4851237
NCBI-ProteinID:
XP_001387477
JGI:
66409
UniProt:
A3GG38
LinkDB
All DBs
Position
1:1286053..1289596
Genome browser
AA seq
1150 aa
AA seq
DB search
MSLNGGIFRARKRPNTAVSVSEVSTTTISTSSGFPSTKSARELTKNTKYCVSKLPAVPSV
LEPTSSSSSEVFNAYSDHESNYSLVVNEKTINVWSYKSTDPAPLAIQFPVESLENELSLL
PLAILTKPSSGTSQDPGLAILYSSTGRIKFYESVQHAPALGLINDKSLELTIPINSKKGE
YITLAENVEPAGIIVATSWKRCVLISLRDFKSKPHLSSVELLGPNSSPRLFLSSVLFGNS
SGASEDEIVSIKSGKITNHGMTQEIVIQDSAGNFDYFTYQMLSANGSPYIDKKKSFRYNL
VSAVENSVDGFLPGASLNCKFLDLWPLLSQENIYLCLCDVDEFNSNSGSKNLMLLTIKID
ATGVLLYGTHKLMRYEPQQIASSTNKPKLFLPSPGNTAFVTIDNSIILTDIDTSYIQSPT
TFSYYKPRWEDVIRLKSSVETIGFGYENKSADNSNKSNPALIIITKNFGVLRIERFSEED
DKSESKDPTDPLSIVKSHIEQAIFYAKSPEIEFDIYREVPQSVVLLAIESVVTEIINSTS
PYLPAFLPSISEMLLQKSKLYQELITFSNRNFTGISSKIIPKIVEFLEKVEAALNLWLYI
DEQQDPELRKVLEAVVLESNTISLSENDEVLRTFFSKGVQNINPVFTNLTERLVDNGNST
SNIVDLIVKVLYNGVYQIEAKYLLNHSEYPVIKSWIYDTDLVVRIEDIFTSEYCKDVILT
QQRQANLIKFVEVLYYFVTIAIRYMQRYDQHSESLSDYSKWYKSRRHAWINVLLKNALVD
DALSVAESYRDFSSVAFILDTEKEKGDNEEDINSKYGYYFDTYGYEFASSLYDYYLKNDK
IQPLLLGFTNYKNYLDQYLEKGTIKTSSVAWIRYLLDSEFSKASDSLTRAATHKVDENIE
NREFKYSLAKLATIAASNGSGNSRATQEKLQLAENNLIAIRSQRALFKALVGEEQFKVLT
YDFAKRFYTNASVENETKDRILEGSFTQLVENRPISNSDLINWLTLLKPSALDNNNFTLA
LKVASVEVNESRYQYLIKLIWLRLLVIGDDWSSLHKDLISSSDSQSKQKIRKTVLFHTLV
EIGLDAKLVEQMHTLLRKGQIDDEIEDDINVREHTSLLLAKLTDYREEYNFQSWVESVQQ
EVKNSSNHQY
NT seq
3453 nt
NT seq
+upstream
nt +downstream
nt
atgtctttgaacggtggtatattccgagcccgtaagcgtcccaatacggctgtttcggtg
tcggaagtttctaccactactatctccacctctagtgggttcccttctacaaaatcggca
cgagagttgaccaaaaacacgaagtactgtgtttccaagcttcctgcagttccatctgtg
ttagagccgacttcttctagttcttcggaggtgtttaatgcttattctgatcatgaatct
aactactctcttgtagttaatgagaagacgatcaatgtatggagctataaatccacagat
cctgctcctcttgccatccaattccccgtggaatcacttgaaaatgagctatcgctattg
ccgttggccattttgaccaagccgtcaagcggaacgagccaagatcctggtttggcgatt
ttatactcttccacaggtagaataaagttttatgaaagcgtacaacatgctcccgcattg
ggtcttatcaacgacaagtcgcttgaattgacaatcccaatcaatagcaagaagggagaa
tacattactttggccgaaaacgttgaaccagcaggtatcatcgtagctacgtcatggaag
agatgtgtcttaatttcgttacgagacttcaagagtaaaccgcatttgtcgagcgtggaa
ttgttaggtccaaacagctcacctagattatttctttcatctgtattgtttggaaattct
tcgggagcttctgaggacgaaatagtgagcatcaagtcaggtaagataaccaaccatggt
atgactcaggaaattgtcattcaagattcggctggaaatttcgattatttcacctaccag
atgttgtctgcaaacggttcgccttatatcgacaaaaagaagtcgtttagatacaatttg
gtatcggctgtagagaacagtgtagatggattcttaccaggggcgtcattgaactgcaag
ttcttggacttgtggcccctcttactgcaagaaaacatatatctttgcttatgtgacgtt
gatgaattcaacagcaatagtggatcgaagaacttgatgctcttgactatcaagatagat
gctacgggagtattgctttatggaactcacaaattgatgagatatgagcctcagcagata
gcttcctctaccaacaaacccaaattgtttcttccaagtccgggaaatactgcttttgtc
actattgacaattcaataatactcacagatatagatacgtcttacattcaaagtccaact
acattttcatactacaaacccagatgggaagatgtgataagattgaagtcctcggtggaa
acaattggatttggctacgaaaacaagtctgcagacaactctaataaatccaacccagca
cttatcattataaccaagaactttggagtcttgagaatagagagattttcagaagaagat
gataaatcagaaagcaaggatcctacagatccactttccatcgtgaagtcacatattgag
caggctatcttctacgcgaagtctcctgaaattgaattcgacatctatagagaagttcct
cagagtgtcgtattgctagcaattgaaagtgtcgtcaccgaaattatcaactcgacgtca
ccatatctaccagcttttttgccttctatttcagagatgttgttacagaagtcaaaatta
taccaagagttgattactttttccaacaggaacttcacaggtatcagttccaaaataata
cccaaaatagtggaatttttggaaaaggtagaggcagcattaaacttgtggttgtacatt
gatgagcaacaagatccggaattgaggaaggtattggaggctgtagttttagaatccaat
actatctccttgtcagaaaacgatgaagttttgagaaccttcttcagtaaaggtgtacag
aatataaaccctgttttcacaaacttaactgaacgtttggttgataacggaaactcaact
tcaaacattgtcgatctcattgttaaagttttgtataatggtgtctaccaaatcgaggcc
aagtacttgttgaaccatctggaatatccagtaataaagtcgtggatttatgacactgac
ttagttgtcagaattgaagatatttttaccagtgaatattgcaaggatgtcatattaact
cagcaacgtcaagccaaccttatcaagtttgtggaagtcttatactattttgtcacaatt
gcaatcagatacatgcaacgttatgatcaacatagtgagagtctcagtgattactcgaaa
tggtacaaatctagaagacatgcctggataaatgttctcttgaagaatgcattggtagat
gatgctctttctgtagcagagagctacagagacttttcgtctgtggcatttatcttggat
accgaaaaagaaaagggagataatgaagaggacatcaattccaagtatggatactatttc
gatacatacggttatgaattcgcctctagtttgtatgactactatttgaagaatgataaa
attcaaccacttttgttgggattcacaaactacaagaactatctcgaccagtatttggaa
aagggaaccatcaagacatcatcagtagcatggatacgctatttgttggatctggaattt
tccaaggcttctgattctctcactagggctgctacccacaaagtagatgagaatattgaa
aatagagaattcaagtattctcttgcaaagcttgctacaattgcagcaagcaacggttct
ggcaattccagagccactcaggaaaaacttcagctagcagaaaacaacttgattgcaatt
agaagtcaaagagcactcttcaaggctttggttggcgaagagcaattcaaggttcttact
tacgacttcgccaagcgcttttatacaaacgcatctgtggaaaacgaaaccaaagatagg
attctcgaaggctctttcacacaattagtggaaaacaggcctatctcgaactcagacttg
atcaactggttgacgttattgaagccatcggcacttgacaacaataatttcactcttgca
ctcaaggttgcttctgtcgaagtaaatgaatcgagataccagtaccttatcaaattgatt
tggctaaggttgttagttattggtgacgactggagtctgttgcacaaggacttgatatcc
agctccgattctcaatcgaagcagaagataagaaaaactgtattgttccatactcttgta
gaaattggcttggatgccaaattagttgaacaaatgcataccttgttgaggaaaggtcag
attgatgatgagatcgaagatgatattaatgtcagagaacatactagcttgttgttggca
aaattaactgattaccgcgaggaatacaatttccaatcgtgggttgaatccgtacaacag
gaagtgaagaactcgtcaaatcatcaatattaa
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