Scheffersomyces stipitis: PICST_66703
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Entry
PICST_66703 CDS
T01023
Symbol
NUP49
Name
(RefSeq) Nucleoporin NUP49/NSP49 (Nuclear pore protein NUP49/NSP49)
KO
K14307
nucleoporin p58/p45
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_66703 (NUP49)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_66703 (NUP49)
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
PICST_66703 (NUP49)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Nucleoporin_FG
Prenyltransf
FPP
BLOC1_2
Motif
Other DBs
NCBI-GeneID:
4851921
NCBI-ProteinID:
XP_001386936
JGI:
66703
UniProt:
A3GI22
LinkDB
All DBs
Position
1:3189175..3190637
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AA seq
402 aa
AA seq
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MFGTANNSQAPTSGFGFGGANSTGSGFGAKPSGGLFGANQTTNTGPGTFGSGNAFGNNAN
NQQTAGSGGLFGASGQNQQQPTQNQNQQGGGLFGSNSNTAGTSSGGLFGSKPAAGGLFGG
STGAATTGLFGGQNQTQNPQNQQNQQNTGLFGSKPAVGGGLFGASTSGQTPAATGGLFGG
NTANTASSTMGGGLFGGSANQFQQQQQNQQQNQQQLTAMTRVGDLPPAIRQELEEFDRYI
NKQHLVATTLQADYGKHDQLINTIPKDINYLHNKLMSTKQALKFDSGQLVHLKELNNEIT
DDISKIMQLILQLSTPGTRLSSSFQLNEFFVKKIKKYYEILRQYEGVVAELDSILGGLER
SCTEGFGNLFNIVEVIKSQYHLFMELCETMAQLHNEVNKLSK
NT seq
1209 nt
NT seq
+upstream
nt +downstream
nt
atgtttggaactgccaataattcacaggctccaacgtccggtttcggttttggtggtgcc
aattctaccggttcaggcttcggagccaaacccagtggaggtctttttggcgccaatcaa
acaacaaataccggcccaggcacttttggcagtggaaatgcctttggaaacaatgccaat
aaccaacagacagcaggatctggtggcttgtttggcgcttctggccagaatcaacagcag
ccgacacagaaccagaaccaacaaggaggaggattgtttggaagcaatagcaatacggcc
ggaactagtagtggaggtcttttcggaagcaaacctgccgctggtggattatttggtggt
tccactggggctgctacgacaggtctttttggaggtcaaaaccaaactcaaaatccacaa
aaccagcaaaaccaacagaatacgggactttttggtagtaaacctgctgttggcggtgga
ttatttggagcaagtacaagtggacagactcctgctgcgaccggcggcttatttggtgga
aatacggctaacacggcctcttctaccatgggtggagggttatttggaggatctgcaaat
caatttcaacaacaacaacagaatcagcaacaaaatcaacagcagttgactgcaatgacg
agagtgggcgatttgcctccggctataaggcaagagctcgaggagtttgatcgttacatt
aacaagcaacatcttgtagcgactactttacaagctgactatggcaaacacgaccagctc
atcaatactattcccaaggatatcaattatcttcataacaagcttatgtcgacaaaacag
gcgcttaaattcgactctggacaactagttcatctcaaggagctcaataacgaaatcaca
gacgacatctcaaagataatgcaactcatattacagttatctacacctggaacacgtctt
tcttcttctttccagttaaatgaattctttgtcaagaagatcaagaagtactacgagatt
ttgcgtcagtacgagggagtcgtcgctgaactagattcaattctcggtggcttggaaaga
ctgtgtacggaaggttttggtaacttgtttaatatagtagaggttatcaagtcgcagtac
catttgttcatggagttgtgtgaaacgatggctcaacttcataatgaggtgaacaagttg
tcgaagtag
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