Scheffersomyces stipitis: PICST_66784
Help
Entry
PICST_66784 CDS
T01023
Name
(RefSeq) loss upsets vacuole
KO
K17600
vacuolar protein sorting-associated protein 54
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pic01009
]
PICST_66784
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_66784
Protein phosphatases and associated proteins [BR:
pic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
PICST_66784
Membrane trafficking [BR:
pic04131
]
Endosome - Golgi transport
Tethering complex
GARP complex
PICST_66784
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps54
Vps54_N
Motif
Other DBs
NCBI-GeneID:
4836900
NCBI-ProteinID:
XP_001382282
JGI:
66784
UniProt:
A3LN20
LinkDB
All DBs
Position
2:244568..248826
Genome browser
AA seq
1359 aa
AA seq
DB search
MPEEKIPDTILRKASVNESEDLNDDLQNVSDDSESSDTFSNIQSANMPYSNSVHNAIPSG
KHRRTGSAMSFRNSIDNESVFSSTVYYNILNSQSVNPDDSLNTIQGEYSPLGPNSIYELT
IGSDTARARRKKAPKSSVTINGGLTTVANLKFPTTRDIPQIQLVKLKSRVKDSDLQAKYV
ANLEDEYKSFESSYRQLTQDTLFKFTQQEQGKVSASSSVANFQDVEFGSDELSAIPKVYL
EEEFRLDDPRVFKQVIEGASIIPSDNDDPSSHLVNNTALQERISHYLDIVEVSLIKEISK
TSDSFFSTIGDIEKIQTHSNECVDKFQSMKEKLEQVENGHSRKGLQIFDKLVQKKNVEHL
ESCLLQLKYVVSTFDLANKSFTNSQYSKCLTETILTECLVEGLNKNQIEDESLRALYPSF
QFPLVDLTGLPALIHLRNDLQTLKDECSKGYINDFIQVLLDDLRTHCRSVPVQDTLNRLY
NGIDKTKKYHSKPVNNSYLVITDSKRQQLMDYVRNLAKSGRMVQAYSSYQDRIMTEIKDI
IKTNLPTQSQNGSTDMSNTPSRSASVPPESLNSNPSAISQSQTGESLQVPHSTNTSLSSN
IKSLTPKEFEQMFIKTYADLSECLRRLTAHQKLLLDLALTTTTSLAPDFDIMSLDISIAI
SKAIELTQVRLTRVINVRSEQTADLTVPFYLRLNSITSAYLQECELISPGFNGSALSEWF
RNHLNYFVHRFHHNALKALVTDTNRDTWKEVTSAEALSEAQEIVDEITGYTDYILLNGNT
GFSGEKWLEPLDFHEKPEVHQDTKVVENDKIRVTIGSESFMIPSLALRSVRQIRDYLIIA
KVFTSTASSIENNLLNYFKLLNSKTYQAVLNAGATRTAGLKHIFPKHIALCIQLVEFNLS
LLDRLKTVFPSRESTPVPVSGSPSEDLSFARIISNYKDHENELFSKLVSILHDRTVTHSA
TIKNINWSEPLKHPQQCHQYMETLVKDTLTVTKAISRYLPELKCSLILSQIFDNYKRILV
ECYCTQLPQFKDFNEKHMVLKDIDYFRVKLCELPGYGNSGQVIWENVNSLPTVEDTKMEE
VMRHNIADERLQISSVRGSAKSSLEVQRSSEEKQRKTEVQPITENLPGQELLVSAIEPEE
EKELPISEKEAVPKNEIAEKEDSEIDTEILEKAAVTAPEIAVDEEEPEKDEVIDKQLPVI
DENDAKPGDGALLPEKEAPQSDPDDIVNGPVQDKEEPAKGDSVQIDEDVKLASEVENPTG
GVAEEPLKEYSEEVTNLTSKDETEVKDDPSSKIEVQITSSEEDIEAGIDSSNGIEENTVV
SESVPEVEQNDEEDSEEVLFDQEAETASATNEDNEGNQK
NT seq
4080 nt
NT seq
+upstream
nt +downstream
nt
atgccggaagaaaagataccagacacgattctccgcaaagcgtccgtcaacgagtcagaa
gacctcaacgatgatcttcagaatgttctggacgactctgagagtctggacacgttttcc
aacatccaatcggccaacatgccttattcgaatagtgtccataatgccattccaagtgga
aagcacagaagaacaggctccgccatgtcgttcagaaacagcatcgacaatgagagtgtt
ttttcatctactgtctactacaacatcctcaattcacagctggttaaccccgacgactca
ctcaatacaatacagggagaatacctgccattgggacctaactccatctacgagttaact
atagggtccgacacagcccgagctcgtagaaagaaggctcctaaatcatctgtcactatc
aatggtgggctaacaacggtagcaaacttgaagtttccaaccacaagagacataccccag
atccagttggttaagctcaagtcgcgtgtcaaggattcggatttgcaggccaagtatgta
gcgaatctcgaagacgagtacaagtcctttgagctgagctacagacagcttactcaggat
acgttatttaagttcacacaacaggaacagggtaaagtgtctgcgtcgtcgtctgtggct
aatttccaggatgtagagtttggatctgatgagttgagtgcgataccgaaagtgtatctc
gaggaagagttccgtcttgatgatccccgagttttcaagcaagtaattgaaggtgccagt
ataataccctcagataatgacgatccttcttctcacttagtgaacaacaccgcgcttcaa
gagagaatctcgcactatttggacatcgtagaagtcagtctcatcaaggagatctccaag
acatcagactcttttttcctgacgataggcgatatcgaaaagatccagacacatctgaac
gaatgtgtagataagttccagagcatgaaggagaaacttgaacaagttgaaaatggccat
tccaggaagggcttacagatctttgataaacttgttcagaagaaaaatgtagagcacttg
gagtcatgtttgttacaattaaaatatgtagtttccacatttgatttggctaacaagtcg
ttcacgaattcgcaatattcaaaatgcttgacggaaacaattctcacggaatgcttggta
gaaggtttaaataaaaaccagattgaagatgaaagtcttcgagccctctatccaagtttt
cagtttcctcttgtggatttgactggtttgcctgcattgatccatcttcgtaatgatctt
caaaccctcaaggacgaatgtagcaaaggatacatcaacgacttcatacaggtgctattg
gacgatttacgtacacattgccgttcagtaccggtgcaagatacactcaacagactctat
aatggtattgacaagacgaagaaataccactcaaagcccgtcaacaattcttatcttgtg
atcacagactctaagcgtcagcaattgatggattatgtccgaaacttagccaagtcaggc
agaatggtacaagcatattcgtcatatcaggatcgtatcatgactgaaatcaaggatatc
atcaagaccaatcttcccacacaatcacaaaatggatctacagatatgtccaacacgcca
tctagatctgcgtctgtaccgcctgagagtttgaatagcaatccttctgcaatttctcaa
agtcaaactggtgaatctttgcaagttcctcattctacaaacacttcattgtcttctaac
atcaagtcgcttacacctaaagaatttgaacagatgtttatcaaaacgtatgcggattta
tcagaatgtttgcgtagactcactgctcaccagaagttgctacttgatttggcacttacg
actacaacttcactcgctcctgattttgatatcatgtcgcttgacatttccatagccatc
agtaaggcgatagagctaactcaagtaagacttaccagagttatcaatgttagactggaa
caaactgccgacctcactgtacctttctatctcagattgaactctatcacgtctgcttac
ttgcaagagtgtgagcttatatctcccggcttcaacggaagtgcactcagtgagtggttc
agaaaccacttgaactactttgtgcacagatttcatcataatgcattgaaggctttggta
acagatacaaacagggatacttggaaggaagtaactctggcagaagcactttctgaggct
caggaaattgtagacgaaatcacaggctatactgactacattctccttaatggtaacact
ggtttttctggtgaaaagtggctagaaccgcttgatttccatgaaaaaccagaagttcac
caagatacaaaggttgtagaaaatgacaagattcgtgtaactattggctccgagagcttt
atgattcctagcttagcgcttagatctgttagacaaattagggattatctaattatcgcc
aaggtattcacaagtacagcttcttccatcgaaaacaacctcttgaactacttcaagttg
ttgaattccaagacttatcaagcggttttgaatgctggagctaccagaacagccgggttg
aagcatatttttcccaagcatatagccttatgtattcagttggtggagttcaatttgtct
ttgttggacaggttgaagacagttttcccttctcgagaatccactccagttcctgttagt
ggatcgcccagtgaggatttgtctttcgccagaatcatcagcaactacaaagaccatgag
aatgaacttttctccaaacttgtgtctattttgcacgatagaactgtcacccatagtgct
actattaagaacattaactggtcagagcctcttaaacatccgcagcagtgccatcagtat
atggaaactttggtgaaggacactttgacggttacaaaggctatttcgcggtatttgccc
gagctcaagtgctcgttgatcttactgcagattttcgataactacaagagaatcttggtt
gaatgctactgtactcaattgcctcagtttaaggacttcaatgaaaagcacatggtatta
aaggatatcgactactttagagtgaagttatgtgaacttccgggctacggaaactccggg
caggttatttgggagaatgttaactccttgcctaccgttgaggataccaaaatggaagaa
gtaatgagacataacatagcggatgaaagattgcaaatcctgagtgtaagaggctcggca
aagagttctttggaagtgcaaagatcttctgaagaaaaacaaaggaagactgaggtacaa
ccgattacggagaatcttcctggtcaggagcttctagtgtctgcaatagaaccagaagaa
gagaaagaacttccgatatcagaaaaggaagccgttcctaaaaatgaaatagccgaaaag
gaggattcggagattgatacagaaattcttgagaaggcagcagtgactgctccagagatc
gcagtcgatgaggaagagcccgagaaagatgaagtaatagacaagcagttaccagtcata
gatgagaacgatgcaaaaccaggagatggagctctacttccagaaaaggaagctcctcaa
tctgatccagatgatattgtaaatgggcctgtacaggacaaagaggaacctgccaaaggg
gatctggttcaaatagatgaagatgtcaaattagctagtgaagtggaaaaccccactggg
ggagttgctgaggagcctttaaaggaatactctgaagaagtgactaatttaacgtctaag
gatgaaactgaggttaaagatgatccatcttcaaagattgaagtacagataacttcatcc
gaagaagatatagaagctgggatagacagcagcaatggaatcgaagaaaacacggttgtt
tcagaactggtgccagaggttgagcagaacgatgaagaggactcggaagaggttcttttt
gatcaagaagcagagactgcttctgctactaatgaagacaacgaaggaaatcaaaagtaa
DBGET
integrated database retrieval system