Scheffersomyces stipitis: PICST_66970
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Entry
PICST_66970 CDS
T01023
Symbol
POL2
Name
(RefSeq) DNA-directed DNA polymerase epsilon, catalytic subunit A
KO
K02324
DNA polymerase epsilon subunit 1 [EC:
2.7.7.7
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic03030
DNA replication
pic03410
Base excision repair
pic03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PICST_66970 (POL2)
03410 Base excision repair
PICST_66970 (POL2)
03420 Nucleotide excision repair
PICST_66970 (POL2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pic03032
]
PICST_66970 (POL2)
03400 DNA repair and recombination proteins [BR:
pic03400
]
PICST_66970 (POL2)
Enzymes [BR:
pic01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PICST_66970 (POL2)
DNA replication proteins [BR:
pic03032
]
Eukaryotic type
DNA Replication Elongation Factors
DNA polymerase epsilon complex
PICST_66970 (POL2)
DNA repair and recombination proteins [BR:
pic03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Long Patch-BER factors
DNA polymerase epsilon complex
PICST_66970 (POL2)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DUF1744
POL2_thumb
DNA_pol_B_exo1
zf-DPOE
zf_DPOE_2
DNA_pol_B
DNA_pol_B_exo2
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
4837222
NCBI-ProteinID:
XP_001383043
JGI:
66970
UniProt:
A3LPB9
LinkDB
All DBs
Position
2:complement(1439268..1446202)
Genome browser
AA seq
2222 aa
AA seq
DB search
MSTRGRNSFKGSTSARFVKNKVNSEFRNRQPRQDARAIDPYIANNPMLNDSITKKELVAR
IDALDSMMGFSRIEHGEADGMKPRKGWLVNMHATTIPSDEYLTGYSGVDYYFLDEEGGSF
KTTLQFDPYFFLDLIPGHESEVEEWLKKFLEECHVKNLSRVIKEDLALPNHLVGLQKNLI
KLTFHNVQDLLAARRLLSPIIKDNQAKKGSRDIYNVMNFTNGNSNNSDFNDSIADPATLI
DDMREYDMPYHVRVSIDINVRVGKWYDVYVKHSQVTLVEDKDKIAFADPVVLAFDIETTK
APLKFPDAKIDQIMMISYMIDGDGFLITNREIISEDIEDFEYTPKPEYPGMFTIFNEPDE
KHVLMRFYEHIREAKPTVIATFNGDFFDWPFVENRTRFHDMDMFDEIGFAKDNEGEYKSK
YCVHMDCFRWVKRDSYLPQGSQGLKAVTTAKLGYNPTELDPELMTPYAYEHPQLLSEYSV
SDAVATYYLYFKYVHPFIFSLCTIIPLNPDEVLRKGTGTLCEMLLSVQAYENGILLPNKH
SDPIERFYDGHLLESETYVGGHVESLEAGVFRSDIPYDFKVDPTAIDELLHNLHSSIKFC
IEVENNKKMEQITNFDEVYNDIKSKLLALKETPKRKEEPLIYHVDVASMYPNIMTSNRLQ
PDSMKSEEDCAACDFNRPGKNCDRRLPWSWRGEYFPAEMNEYNMIKRTLQNETFPASRPW
LPERSFDELSYTEQATLIKKRISDYSRKVYHRVKKSKVVNREAIICQRENPFYVNTVISF
RDRRYEFKGLAKVWKGKVSKIDKHDSIARDEAKKMVVLYDSLQLAHKVILNSFYGYVMRK
GSRWYSMEMAGVTCLTGATIIQMARTLVERIGRPLELDTDGIWCILPKSFPENYNLKCKD
GKKIFLEYPCSMLNYLVHEQFTNHQYQDLVDPATFKYKTRSDNSIFFEVDGPYKAMILPT
SKEEGKGLKKRYAVFNDDGSLAELKGFELKRRGELQLIKNFQSDIFKLFLEGSTLEQCYQ
AVATVANNWLDVLDTKGGMLEDEDLIELICENRSMSKSLEEYGDQKSTSITTAKRLGEFL
GEEMVKDAGLATKYIISAKPIGAPVTERAVPVSIFSSDKKEFYLKKWLKDPSLQKFGPRD
VIDWGYYHERLSSVVQKIITIPAALQDVKNPVPRVAHPDWLQKKIHTKEDSRQQSSISTF
FGSANKKEVMEKQVKEIKEIKDIEDFGDIDTVGAPKSRIGKVVSRKRRAARNAIAEAEED
ERNSAILNAPCPSMIEDYECFLQYQKAKWKVQAGNRERRKKIFGSNSESSHRSTVGGMIR
KQAENVAGSNWEILEYKADPSKPGEIKVHISAVGKIHTFTFHIPKKIYAAYKSELQPRKQ
ISGCEIERSNSILPNGHDGSNLYKLIMSESRFNEEITDVESALQDSNILGLYETQINSVE
RAIIDLGNVVKFDDTRVGSLGKGLKNGFQVKDLNRVEGAEYLKRFEMDIVYMLHIVTNSY
EFFTVFKSWEATAEMYILKPSAGAQELPPNIDKIYREIYETKKDRLGKLYNILQYPDNMN
FETHYYNDSSKLFKKLNGAIGKLHASRSNKALFAVQSPYSSKILNLLSSTSDFPVVRMNV
SELALPAVGWQSLISMRVINHYFVLANWIKNLVALAKYGNVPLCNLQIENVGYLIDIEYA
RRLSQNNIVLWWSANPLPDHGGFELDKAPDYENLNFPTINNPEIYETACLEVEIGNLTIN
TFLTSSLINEAEGSDLADDGVVFDKNNGASTIAEDSFSSPALSILRGMVKEWWDDALKNN
INADSMMNSLVTWVQRKDSFLYDYSLHYHIHNLTTKALLQLIGEFKRMNSQVVFANRNKL
IIQTTKVSVENSYAFGQYILKAARSKPLFNFLDLNIIKYWDILVWMDEFNFGGRCCKQIT
DDDIQDLMPVNSWQIKQFLPVIFRDEFEDWMVVFLDALTKFKNDKLTGNTQSGTPRVTQI
VHILKGQRKLEAKEEEEEDIFNGVFEVFRKSLQKRIERIYHRQNEAILNPEFAQEYEFPK
LPGSHLHMKNPALELVKFLCAVFGLSKKRTIEVRVLRKELLSIFDIKEFSSEANFRNPST
TLKVPHIICDYCNFIRDVDFCRDSEKDLWNCSNCHRPYNRVSMEEEVITQYIKLITKFYS
QDFKCAKCNSVRVGNLSLFCKCSGKWEETISYSEVEKKLHVFANIANSYKFQLLKGLIEE
AA
NT seq
6669 nt
NT seq
+upstream
nt +downstream
nt
atgtctacacgaggaagaaacagtttcaagggactgacatcggcccggttcgtcaagaac
aaggtcaattcggagttccgcaaccgccagccgagacaagacgcaagagccatcgacccg
tatatagccaacaaccccatgctcaacgattccatcaccaaaaaggagttggtggctcga
atagacgcgttggattcgatgatgggcttttcccgtatcgaacatggcgaagctgatgga
atgaaaccgcgtaagggctggttggtgaatatgcatgctaccactattcccagtgatgaa
tatctcacagggtactctggtgtagactactatttcttagatgaagaaggtggttcgttc
aaaaccacgttacagtttgatccgtatttctttctagatctcattcccgggcacgagtcg
gaagtggaggagtggttgaagaagtttttggaggaatgccatgtcaagaacttatcccga
gtcatcaaagaagacctcgcccttcccaaccacttggtaggactccagaagaacttgatt
aaattaacgtttcacaatgtccaggacttgttagccgccagaaggttactctctcctatt
atcaaggacaatcaggctaagaagggctccagagatatctacaatgtaatgaacttcacc
aacggcaacagtaacaactcagattttaatgattctatagctgatccagctactttgata
gacgacatgagagaatatgacatgccataccatgttcgggtatctattgatatcaacgtc
agagtcggtaaatggtacgatgtgtatgtcaagcattcacaagtaaccttagttgaagat
aaggataagatcgcatttgctgatcctgtagtattagctttcgatatcgaaaccacaaag
gctcctttgaagtttccagatgccaaaatcgaccagatcatgatgatctcgtatatgata
gacggagatggtttcttgatcactaacagagaaataatctctgaagacattgaagatttc
gagtatacgcctaagccagaataccctgggatgtttacgatttttaacgaacccgatgaa
aagcacgtcctaatgagattctacgaacatataagggaggctaaaccaaccgtgatagca
acatttaacggtgattttttcgattggcccttcgtagaaaatagaaccagattccacgat
atggacatgtttgatgaaattggcttcgcaaaagataatgaaggcgagtataagtccaag
tactgtgttcacatggactgtttcagatgggtcaaaagagactcgtatttgccacaaggg
tctcaaggtttgaaagctgtgacaacagcaaagttgggttataatccgacggaattagat
ccagagctaatgacaccatatgcttacgaacacccacagttactttcagaatactcggtt
tccgatgctgttgccacttactacttgtacttcaagtatgtccatccgttcatcttttcc
ttgtgtacgattattcctttgaacccagatgaagttttgagaaagggaacaggtacgttg
tgtgagatgttgttgtcggttcaagcctatgaaaatggcattttgcttccgaacaagcat
tccgatccaattgagcggttttacgatgggcatttgctagaatctgaaacttacgtaggt
ggtcatgtagagtctttggaagctggagtttttaggagtgacattccctatgactttaag
gtcgaccctacagccatagatgagttgcttcataacttgcatagctcaatcaaattctgt
atcgaagtagaaaacaacaagaagatggaacaaatcaccaacttcgacgaggtttacaat
gatattaagtccaaattgctagcattgaaagaaactccgaaaagaaaggaagaacccttg
atatatcatgtggatgttgcttcgatgtatcctaatatcatgacctctaatagactacaa
ccagattccatgaaatccgaagaagactgtgcagcctgtgatttcaacagaccaggcaag
aactgtgatagaagacttccttggtcctggagaggtgagtatttcccagccgaaatgaac
gaatacaatatgatcaagcgaactttacagaatgaaacatttccagcttcaagaccttgg
cttcctgagaggtcatttgacgagctatcctacactgaacaagcaaccttgatcaagaag
agaatcagtgattattctagaaaagtgtaccatagagtcaagaaatcgaaggtagttaat
agagaggctattatctgtcaacgagaaaatcctttctatgtcaacactgttatttctttc
agagatcgtcgttatgaattcaaaggcttggccaaggtttggaaaggaaaggtgtccaag
attgataaacatgattctattgccagagatgaagcaaagaaaatggtagttttgtatgat
tccttgcaattggctcataaggttattttgaactctttctacggatatgtgatgagaaaa
ggttcccgttggtactcaatggaaatggctggtgtgacatgtttgactggtgccacaatt
attcaaatggctagaactttagtcgaaagaattggaagacctttggaactagataccgat
ggtatttggtgtattttgcccaagtctttcccagagaattacaatttgaaatgcaaagat
ggcaagaagatttttcttgaatatccctgttccatgttgaactacttagttcatgaacaa
tttactaatcaccaataccaggatctagtggatccagccactttcaaatacaaaactaga
tctgacaattccattttcttcgaagtagatggtccatataaggctatgattttgcctact
tctaaggaagaaggtaagggattgaagaaaagatacgctgtgttcaatgatgatggttct
cttgctgaattaaagggatttgaattgaagagaagaggagagttgcagcttatcaagaac
ttccaatctgatattttcaaattgttcttagaaggatctacgctagaacaatgttaccag
gcagttgctactgttgccaataactggttggatgtattggatacaaaaggaggaatgctt
gaagatgaagatttaatcgaacttatttgtgaaaatagaagtatgtccaaaagtttggaa
gaatacggagaccaaaaatcgacatctatcactactgccaagagattgggagagtttctt
ggtgaagaaatggtcaaggacgctggtttggctaccaagtacattattagtgcaaagcca
attggtgctcctgtgacagaaagagctgttccagtgtctattttctcctcagacaagaag
gagttttatttaaagaaatggttaaaggatccttctcttcagaagtttggtcctagagat
gtgattgactggggatattaccatgaacgtttgtcttcagtagttcagaagattatcacg
attccggcagcattgcaagatgtgaagaacccagtacccagagttgcacatccagattgg
ttgcagaaaaagatccacaccaaggaagattctagacaacaaagttcgatttctactttt
ttcggtctggccaacaagaaagaagtaatggagaagcaggtcaaggaaattaaagagatt
aaggatatagaggactttggagatatagatactgttggggcacccaagtcaagaatcgga
aaggtcgtctcgagaaagagacgagcagctagaaacgcgatcgcagaagctgaagaagac
gaacgtaatagtgccatcttgaatgcaccttgtccgtccatgatagaagactacgaatgc
ttcttacaatatcaaaaagccaagtggaaagtgcaagctggcaacagagagagaagaaag
aagatctttggtctgaattctgaatcgtctcatagatcgacagtaggtggtatgatccgt
aaacaggcagagaatgtagcaggatcgaattgggaaattttggaatacaaggctgaccca
agcaagcctggtgaaatcaaggtacatattctggctgttggtaagattcatacctttact
ttccatattccgaagaagatctatgcagcttacaaatctgaacttcaacccagaaagcag
atcagtgggtgtgaaattgaaaggtccaactcgatcttacctaatggacatgatggttcg
aacttgtacaaattaataatgtcagaaagtagattcaatgaagagatcactgacgtagaa
agtgctcttcaagattctaatattcttggactctacgagacacaaattaattctgtcgaa
agagctatcattgatttgggaaacgttgtaaagttcgatgatacaagagttggttcgttg
ggtaaaggtctcaagaatggtttccaggttaaagatttgaatagagttgaaggtgctgag
tatttgaaacgatttgaaatggacattgtctacatgttacacatcgtgacaaacagttac
gagttcttcacagttttcaaatcttgggaagcgactgcagaaatgtacatcttgaaacct
tccgctggagctcaggagttaccacccaacatcgacaagatctacagagagatctacgaa
actaagaaggacagattagggaagttgtacaatattcttcaatatcctgataatatgaac
tttgagactcattactacaatgacagttcaaagttattcaagaagttgaatggtgcaatt
ggaaagttgcatgcatcaagaagtaacaaggcattatttgctgttcaatctccatattcg
tctaagattctaaatcttttgagttctacatctgatttccctgtcgttaggatgaatgtt
agtgaattggcgctaccagcagttggatggcaatccttgatttcaatgagagttatcaat
cactatttcgttttggcaaattggatcaagaatttagtagcccttgccaagtatgggaat
gttccattgtgcaatttacaaatcgaaaatgtgggctacttgatagatattgaatatgca
agaagattaagtcagaacaatattgttctctggtggtctgccaatccattgcctgatcat
gggggatttgaacttgataaagctcctgattatgaaaatcttaactttccaacaatcaac
aaccctgagatttatgaaacagcttgtctagaagtagaaattggaaatttgactatcaac
accttccttacaagctctctcatcaatgaggctgaaggttcagatctagctgatgatgga
gttgtattcgacaaaaacaatggtgcatcgacgattgcggaggattccttttcttcgcct
gcgttgtccattttgagaggaatggtcaaggagtggtgggacgatgcattaaagaacaac
attaatgctgattcaatgatgaacagcttggttacttgggtgcaaagaaaagactcgttc
ctttatgattattccttgcattaccatatacataatttaacaacgaaagcattattacag
ttgattggtgaattcaagagaatgaattcccaggttgtctttgctaatagaaacaagtta
atcattcaaacgaccaaggtttctgttgagaattcgtatgcatttggtcaatacattcta
aaagctgctagatcaaagcctttgtttaattttttggatttgaacatcatcaagtattgg
gatattttggtatggatggatgagttcaactttggtggcaggtgttgtaaacaaatcaca
gatgatgatattcaagacttgatgcctgtcaatagctggcaaatcaaacaattcttgccg
gttattttcagagacgaatttgaggattggatggttgtctttttggatgctcttactaaa
ttcaagaacgacaaattaacgggtaatactcaatctggaactcctcgtgttacacaaatc
gttcatatcctcaagggccagagaaaacttgaagccaaagaagaagaggaggaagatatc
tttaatggggtctttgaggtgttcagaaagtcattgcaaaagagaatcgaaaggatctac
catcgtcaaaacgaagccattctcaaccctgaattcgcacaagagtatgagttccccaaa
ttaccaggttcccatttgcacatgaagaatccagcattggagttggtcaagtttttatgt
gctgtattcgggttgtcgaagaagagaaccattgaggtcagagtattgagaaaggaattg
ttgtcgatctttgatatcaaagagttcagtagtgaagctaatttcaggaacccaagtact
acattgaaggtccctcatattatctgtgactattgtaacttcatcagagatgtggatttc
tgtagagactcagaaaaggatctctggaactgttccaattgtcacagaccatacaatcgt
gtttccatggaagaagaggtgatcacacaatatattaagctcattaccaagttctacagt
caagatttcaagtgtgcaaagtgtaattcggttagagtcggcaacttgagtttgttctgc
aagtgttctggaaaatgggaggagactatcagttattcggaagtcgagaagaaattacat
gtttttgccaatattgccaattcgtacaaattccagcttttgaaaggattaatagaagaa
gcagcctga
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