KEGG   Scheffersomyces stipitis: PICST_67185
Entry
PICST_67185       CDS       T01023                                 
Name
(RefSeq) Ku80 protein
  KO
K10885  ATP-dependent DNA helicase 2 subunit 2
Organism
pic  Scheffersomyces stipitis
Pathway
pic03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:pic00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    PICST_67185
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:pic03400]
    PICST_67185
DNA repair and recombination proteins [BR:pic03400]
 Eukaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    DNA-PK complex
     PICST_67185
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-GeneID: 4838200
NCBI-ProteinID: XP_001383282
JGI: 67185
UniProt: A3LQS3
LinkDB
Position
3:40238..42326
AA seq 685 aa
MTFFVIDTTSEMVNRSNPVSKRSSLERGLGYFHDHTATLLLKNRKIDRVGIICASDAGNH
VYSADEAFTYTDLRHFSTIIEESCKVTSGPPGKPSLVEAVTLGLNQFKPKIHLKYLRNLV
IISNAAGSQDLDEVDLSEYTSLIKAYNINVIFVGIDFSANFEKTPEKEKNEQFWRKIVEK
EWGGVVLDADEANESLVYSSTLKKVAPRVSYSGSITFGLSSDSLTNVSILQDDPLSLKLD
VQTFPATKIEKIVGHTYTISENHAANTVKRTANYYYKKYDNNEGRDEMAGEQDDDDNNGN
YVKVDVHPGEFVPGFKYSNRDIIAVNSDLAEIAQLRSNPGLSIIGFIQKTNLPYAYFTDE
SSYVIPTKGGKVSNPILFNSFAKALLELKAVALARFVLADGKEINLCVLIPQLVSVNGRL
SYSFISVRLALKEDQKIGRFPYLTKKAESQIDKDEIEAEDEDDDDEDEDDKKREEQGDIR
QRKFPSDETNSLMDSFILSRDLDGGSNKPTINVLHNQKLDLVDSQCVYMGDRLDDMSVDE
KLIPRSTALAKYNRNLKKIIITSLEHDSLSLFLSEEKFVEKYLVEKNPNAEKISNLYHYD
NILRGNTVGTKGWLKGFNVHSSDISKTLIDALDVKYLEKDEKKHKRRKYEGTAFERFFRN
EGDSANSDMKADFDEFFDVKDLLGG
NT seq 2058 nt   +upstreamnt  +downstreamnt
atgacgttcttcgtcattgataccacactggagatggtcaataggtcaaatcccgtttca
aaaagatcaagccttgagagaggattaggctactttcatgatcatactgcgactctattg
cttaagaacaggaagattgaccgcgtaggcataatttgtgcctcagatgctggtaaccat
gtctacagtgctgatgaggctttcacatatacggatcttcgtcacttttccaccattata
gaagagtcgtgtaaagtcacatcagggccaccaggcaagccaagtcttgtagaagccgtg
acgttgggactcaaccaattcaaacccaagattcatttaaagtacttgcgtaacttggtg
atcatttcaaatgccgcaggatcacaagatctagatgaagtggacttgagcgagtatacg
agtttgattaaggcttacaacatcaacgtaatatttgtaggcatagacttcctggccaac
tttgagaagactccagaaaaagaaaaaaacgaacaattctggagaaagattgtagagaag
gaatggggtggcgtagttttggatgcggacgaagcaaatgagtctttggtgtactcgctg
acgctcaagaaagttgctcccagagtaagctattcaggctcaataacatttggactaagt
agcgattccttaaccaatgtaagcatattgcaagatgatcctttatcgcttaaattagac
gttcagacattcccagctaccaagattgagaaaatagtcggtcacacatatacgatatcc
gagaaccatgccgccaataccgttaagagaacagcaaattactattacaagaagtatgat
aacaatgaaggaagagatgaaatggctggagaacaggacgatgatgacaacaatggcaac
tatgtcaaagtggatgttcatccaggcgaatttgtaccaggcttcaaatattcgaatcgg
gatatcattgctgtaaattccgaccttgctgaaatagcacagcttcgctcgaatcctgga
ctctccattatcggcttcattcagaaaaccaacctaccttatgcatatttcacggatgaa
tcaagttatgtaataccaacaaagggaggcaaagtgtcaaatccaattttgttcaactct
tttgccaaagctttgcttgaattgaaagctgttgcattagctcgtttcgtgttggctgat
ggtaaggaaataaatctttgtgtcttgattcctcaacttgtctcggtaaatggcaggtta
tcgtactcgtttatactggttagactagcattgaaagaagaccagaagatcggtagattt
ccctacttgaccaagaaggctgaatctcaaattgataaagatgaaattgaagcagaagac
gaagacgatgatgatgaagatgaagatgacaagaaacgagaagagcaaggcgatatacgt
caacgtaaatttccatccgatgaaactaattccttgatggattcttttattttatcgcga
gatttggatggtggttccaacaagcctactattaatgtcctacataatcagaaattagac
ttagtcgatagtcaatgtgtttacatgggcgacaggctagatgatatgagcgtagacgaa
aagcttattccacgctccactgctttggcgaagtataacagaaacttgaagaagatcatc
atcacatcgctcgagcatgatagtctttccttattcctcagtgaagagaagtttgtggaa
aagtacttggttgagaagaatcccaatgctgagaagatatcgaatctataccactacgac
aatattcttcgaggcaacactgtaggcaccaagggctggctcaaaggcttcaatgtacat
tcgagcgatatttccaagacattgatcgatgcccttgatgtgaaatatcttgagaaggac
gagaagaaacacaagcgtcgtaagtacgaaggaactgcattcgaacgattcttccgtaat
gaaggcgactctgcgaactccgatatgaaggctgactttgatgaatttttcgacgttaaa
gacttattgggtgggtag

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