Scheffersomyces stipitis: PICST_67292
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Entry
PICST_67292 CDS
T01023
Symbol
SHM2
Name
(RefSeq) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pic
Scheffersomyces stipitis
Pathway
pic00260
Glycine, serine and threonine metabolism
pic00460
Cyanoamino acid metabolism
pic00630
Glyoxylate and dicarboxylate metabolism
pic00670
One carbon pool by folate
pic00680
Methane metabolism
pic01100
Metabolic pathways
pic01110
Biosynthesis of secondary metabolites
pic01200
Carbon metabolism
pic01230
Biosynthesis of amino acids
pic01240
Biosynthesis of cofactors
pic04981
Folate transport and metabolism
Module
pic_M00141
C1-unit interconversion, eukaryotes
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
PICST_67292 (SHM2)
09102 Energy metabolism
00680 Methane metabolism
PICST_67292 (SHM2)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
PICST_67292 (SHM2)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
PICST_67292 (SHM2)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
PICST_67292 (SHM2)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
PICST_67292 (SHM2)
Enzymes [BR:
pic01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
PICST_67292 (SHM2)
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
4837688
NCBI-ProteinID:
XP_001383426
JGI:
67292
UniProt:
A3LRJ3
LinkDB
All DBs
Position
3:744315..745988
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AA seq
470 aa
AA seq
DB search
MPYALSESHKQLVSGHLAETDPEVDQIIKDEIDRQRHSIVLIASENFTTTAVFDALGTPM
CNKYSEGYPGARYYGGNEHIDRIELLCQERALKAFNVTADKWGVNVQTLSGSPANLQVYQ
AIMKPHERLMGLDLPHGGHLSHGYQTDSRKISAVSTYFETMPYRVDLATGLIDYDMLEKT
AVLFRPKVLVAGTSAYCRLIDYKRMREIADKVGAYLVVDMAHISGLVAAGVIPSPFEYAD
IVTTTTHKSLRGPRGAMIFFRRGVRSVNPKTGQEILYDLENPINFSVFPGHQGGPHNHTI
TALATALKQAATPEFREYQEQVLKNAKVLETEFLAKGYQLVSHGTDSHMVLVSLKDKNID
GARVETVCEKINIALNKNSIPGDKSALVPGGVRIGAPAMTTRGLGEEDFKKIVTYIDFAV
NYAKELQASLPKEANKLKDFKSAVLNGDDEKLKAVKAEISQWAGEFPLSV
NT seq
1413 nt
NT seq
+upstream
nt +downstream
nt
atgccttacgccctctctgaatcgcacaagcaattggtctcgggccatttagccgaaacc
gacccggaagtcgaccaaatcatcaaggatgaaatcgacagacaaagacactccatcgtg
ctcattgcttctgaaaacttcaccaccaccgccgttttcgacgccttgggaacgcccatg
tgtaacaagtactccgaaggttaccctggtgccagatactacggtggtaacgaacacatc
gacagaatcgagctcttgtgtcaggaaagagccttgaaggccttcaacgtcactgctgac
aagtggggtgtcaatgttcagaccctttctggttctccagccaacttgcaagtctaccag
gctatcatgaagccccacgaaagattgatgggtttggacttgcctcacggtggtcatttg
tcccacggctaccaaaccgactccagaaagatctcggctgtttctacttattttgaaacc
atgccatacagagttgatttggcaactggtttgatcgactacgacatgttggaaaagact
gctgtcttgttcagaccaaaggttttggttgctggtacatctgcttactgtagattgata
gactacaagagaatgagagaaatcgccgacaaggtcggtgcctaccttgttgtcgacatg
gcccacatctctggtttggtcgctgctggagtaattccatctcctttcgaatatgctgac
atcgtcaccaccaccacccacaagtcgttgagaggcccaagaggtgccatgatcttcttc
agaagaggtgtcagatctgtcaaccctaagactggtcaagaaatcttgtacgacttggaa
aacccaatcaacttctcggttttccctggccaccaaggtggtccacacaaccacaccatc
actgctttagctactgccttgaagcaagctgctactcctgagttcagagagtaccaggaa
caggtattgaagaacgccaaggtgttggaaactgaattccttgctaagggataccagttg
gtttcccacggtaccgactcgcacatggtgttggtttccttgaaggataagaacatcgac
ggtgccagagttgaaaccgtctgtgaaaagatcaacattgccttgaacaagaactccatt
ccaggcgacaaatctgccttagttccaggtggtgtaagaatcggtgctcctgccatgacc
accagaggcttgggtgaagaagacttcaagaagatcgtcacctacattgactttgccgtc
aactacgccaaggagcttcaagcttcgttgccaaaggaagccaacaaattgaaggacttc
aagagcgccgtgttgaacggtgacgacgaaaagttgaaggctgtaaaggccgaaatctcg
caatgggctggcgaattcccattgtctgtttaa
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