Scheffersomyces stipitis: PICST_68402
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Entry
PICST_68402 CDS
T01023
Name
(RefSeq) predicted protein
KO
K06672
cohesin loading factor subunit SCC2
Organism
pic
Scheffersomyces stipitis
Pathway
pic04111
Cell cycle - yeast
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09140 Cellular Processes
09143 Cell growth and death
04111 Cell cycle - yeast
PICST_68402
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_68402
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Adherin complex
PICST_68402
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nipped-B_C
Cohesin_HEAT
Cnd1
SCD
INTS1_R4
HEAT_EZ
Motif
Other DBs
NCBI-GeneID:
4840506
NCBI-ProteinID:
XP_001386207
JGI:
68402
UniProt:
A3LZL4
LinkDB
All DBs
Position
7:1037787..1042415
Genome browser
AA seq
1542 aa
AA seq
DB search
MVGEGVHPRDMREALSIAPFLHLIPKQEIAPLISSTSITISPDPQEFNSQLYDSECKERR
KVVNSDETSFGEVLKDLASEFTDCQDEEVDQIRFRKPEIIQNGEKQPQELTGITLPALER
RIFNSTKIESRQIILSSRSADTRTYTGRLSVRKTYQAEDKQTKAHNDRYLRKYERELGFL
FAEDKEFSKELPNSYANRKRYLEDDEEYNAKRPHRIVTMTYDQVADRANVNMAILLQQIE
REEAEPEISANWMILDDTKILTNYALLHIHDNLIRNLNHRVLHTEDNDISYLSKIQDLCL
RTINASENIDFSELSLRVIAPDLQDNDLASLIISLETCLNFTKASKIMLLLLTSHYSEKL
MFYDAHTNSVIQLMDSVVDLLIIPLASFENVQPITNTLKPILARLLVEVCDLFQLFNSYK
HPNRFDDTLITKLEYLCIHAVFAEYRSKGNNSFFGLSQFELLKLRSCEMIISLFSNISDQ
REFILGELISNFDKLSPNRTVARQYKLAGGGNVQLVSALLAKLIESSSADFDVSSLSESF
IDSPALSNNVKESILNCKKTGDNISRMLISKFSGTTSTMSKQSLELMVEDLLSLMLSPVW
AGSTVLLTSITNSFLIMINAEADPPLETTMLDMLGLIVLKIKCISCKKELKRITPRASSE
DLNICKSMMINVLHELKSISGNVFSIASSQFLLLKYLSYFLSLVGDSENNSLLANTEVEN
LEVVAKQACRDLINATSDGQTNISKDASAYTENEYLSIMNSQELEVLYEGFLGSVVGLMD
SNKVKVRAKCIKILSSLIEQNDELLLSPKIQESVSNRLFDNSPLVRDAVIDLIGRYMSSN
PVLVDRFYKSICECLVDESVQVRKRVAKLSGQMYEKTTSKSVKVYISSKLIRKLNDEDDV
VQDISRSILLSLWFPKSNNLEKVDSSKTTAEVMMDIVKSGGRTSEGFESFIINYVNSNNS
QAAKVAMKLKLAQVFDFIIEGGDAVASAMKLVAMFVKCDSSIINQDQLVSLEPFFIEEKS
TEGTSRLYGLEILSSALPSIGSLRPDFLASLVSNLLKKLTKYSVKELHHVVPSVWVLCQM
NKDSIKLANATISCMRLIKPYFEFKEDKKFDVKLQKLLHLLGCFGRYCRLENHRDLFQKS
SLGFKAKESVTSGIVKFLMYFCDSKMPSTIRNTALANMIHVCRTHTKLFVSEAILKVFDR
EMNLKSNVESFNTIIRGLFDFLKDEEIEVRRRVGSSSTSSDKLKIDISVFHGDSKSFLHD
GICAGLIQRYENRILEMTLYDKGEQSYLAVQFVELIVKIGFSNPKLCIPTIIALHSSPNP
YVRNIARQVHKELFEKHESLIDTSYAEGFTLSFNFSRRLSLDDSSSTEVFNSVYSIIQKT
YSSRKKFINSLLRLLVVDLERTSIVDALEKLQFARNKVCNIAKINFATLEEVLMIVHEID
HVVSRSGMDLVDKLKTQTDDVAIDLVIAQSILAISALRSHLVNKFSLGRSLIDRFIPGKV
DPDMRHAIKSSYQLPLEIPVLPETLEKSSLIIIVQNEVDKYA
NT seq
4629 nt
NT seq
+upstream
nt +downstream
nt
atggtgggagaaggcgtccatcctcgggatatgcgagaggcattgagtatagcgcctttt
ctccatctcattcccaaacaggaaatagcgcctttgatctcatctacatccataacgata
tcgccagatccccaggaatttaactcacaattgtatgattcggagtgtaaagaacgcaga
aaagttgtgaatagtgacgaaaccagttttggcgaagttctcaaggatttggcctctgaa
tttacagattgtcaggatgaggaagtagatcaaatcaggtttagaaaaccagaaattatt
caaaatggggaaaaacaaccccaggaactcacaggaataactttgccggcccttgagagg
cgaatatttaattctacgaaaattgaactgaggcaaatcattttgctgtctcgtagcgcc
gacacaagaacatatactggcagattatccgtgcgcaagacttatcaggccgaggacaaa
caaacaaaagcacataacgatagatatttacgcaaatatgaaagggaactcggatttttg
ttcgctgaggataaggaatttctgaaagaactaccaaattcttatgcaaacagaaagaga
taccttgaagacgacgaagaatacaatgccaaaagaccgcaccggattgtgactatgacc
tatgaccaagtagcagaccgagcaaatgtgaacatggcgatacttctccagcagattgaa
cgagaagaggccgaacctgaaatttctgctaattggatgatcctagatgataccaaaatc
cttacgaattacgccctattgcatatacacgacaacctcatccgaaacttaaaccaccgg
gttttacacactgaagataacgatatctcctacttatcgaaaatccaggatctctgtttg
agaactataaatgcctcagaaaacatcgatttctcggaattgagtttgagagtaattgcc
cctgatcttcaagataacgaccttgcgtctttgattatcagcctagaaacctgtctaaac
ttcaccaaagctagtaaaatcatgcttttgttgctcaccagtcattattcggagaagttg
atgttttacgatgcccacacgaatctggtgatacagcttatggacagtgtggtcgacttg
ctaataataccactcgcatcttttgaaaacgtacaaccaataactaacacgctaaagccc
atattagccagattgctagttgaagtctgcgatttgttccaactcttcaattcctacaag
cacccaaaccgatttgatgacactcttattactaaattggaatacctttgcatacatgca
gtgtttgctgaataccgaagcaagggaaacaattcattttttggtttaagccagtttgag
ttgttgaaattgcgatcttgtgaaatgattatcagcttattctctaatatatctgatcag
cgagagttcatcttaggagaactcatatcaaattttgacaaattactgcccaataggaca
gttgcgagacaatacaaacttgctggtggaggcaatgtacaattggtttctgcccttcta
gccaagttgattgaaagcagctcagcagactttgatgtactgtctttatcggaaagtttt
attgacctgcctgctttatccaataacgtcaaggaatcaattctcaactgcaagaaaact
ggagacaatatttccagaatgttgatctccaagttcagtggaaccacctcaacaatgagc
aaacagtcattagagttaatggttgaagacttactactgcttatgttgtcaccagtttgg
gccggttccaccgttctattgacttcgatcacaaattcatttcttatcatgatcaatgca
gaagctgatcctcctcttgagactacaatgttggatatgttaggattgattgtattgaag
atcaagtgtatatcctgcaaaaaggaattgaagcgtattacccccagagcttccagcgag
gatttaaacatatgtaagtccatgatgatcaacgttcttcacgaattgaaaagcatttct
ggaaatgtctttctgattgcaagttctcagtttttgctactcaagtatctttcgtatttc
ctttcgttagtgggggactcagaaaataatagcctattggccaatactgaagtcgaaaac
ttggaggtggtcgctaaacaggcatgtagagatttgataaatgcaacttcagatggccaa
actaacattctgaaggatgcttcggcttacactgagaacgagtacctttccataatgaat
agccaagaattagaggttctttacgaaggatttttaggctctgtggttggattaatggat
agcaataaagtcaaagtgagagctaaatgtatcaaaattctttcgtcgttaattgagcag
aatgatgaacttttactttcgccaaagattcaagagtctgtgtcaaacaggttatttgat
aattctccacttgtcagagatgcagtgattgatctaattggaagatacatgtcttccaac
cctgttcttgttgacaggttctacaaatccatttgtgaatgccttgttgatgagagtgtc
caggttcgtaagagagtagccaagttgagtgggcagatgtacgaaaagacaacgtctaag
tcagtaaaggtatatatttcttccaagttgataaggaaattgaacgacgaggatgatgta
gttcaagacatttccagatccatactcctttcgttatggtttcccaaactgaataatttg
gaaaaggttgattcatctaagacaactgctgaagtaatgatggatatagtaaaaagtggc
ggaagaactagcgagggcttcgaatctttcataataaactatgtcaactccaataatagt
caagcagcaaaagtcgccatgaaattgaaattggctcaagtttttgatttcataattgaa
ggtggcgatgccgttgccagtgccatgaaactagtcgcaatgtttgttaaatgcgacagt
tctatcataaatcaagatcaacttgtttcattggaaccattctttatagaagaaaaatca
actgaaggaacttcaagactttatggtttagagattctatcctcggccttaccaagcatt
ggttcattacgtccagatttcttggcttcgttggtttcgaatttattgaagaaacttacg
aaatacagcgtcaaggagttgcatcatgttgttcctagtgtatgggttctttgtcagatg
aacaaggattcaattaagcttgccaatgctacaatttcttgtatgagactcattaagcca
tactttgagttcaaggaggacaaaaagttcgatgttaagttacagaagcttttacatctt
ttgggatgctttggaagatactgtagacttgagaatcatcgtgatctctttcagaaatct
tcccttggattcaaagcaaaagaatcagttactagtggaatcgtgaaattcttgatgtac
ttctgtgattccaaaatgcccagcacaatccgaaacacagctttggcaaatatgatccat
gtttgccggactcacacaaagctctttgtttcggaagctatcttgaaggtcttcgataga
gaaatgaatctaaaaagcaatgtcgaatccttcaataccattatccgaggactcttcgat
tttttgaaggatgaagaaattgaagtacgcagaagagttgggtcttcatctacttcttct
gacaaactcaagattgatatctcagtatttcacggcgattccaagtcgtttcttcatgat
ggaatatgcgctggtctcattcaacggtacgagaatagaatacttgaaatgacactatat
gataaaggagagcaatcataccttgcagttcagtttgtagaactcattgtcaagattgga
ttttcgaacccaaaactttgcattcctacaattatagcattacattccagtccaaatcca
tatgttagaaatatcgcaagacaagtccacaaagaactttttgaaaagcacgaatccttg
attgatacaagctatgctgaagggttcacattgtcgtttaatttcctgagaagattatct
ttagacgattcgtcatctacagaggtattcaattccgtgtactcgattatccagaagacg
tattcttctagaaaaaagttcatcaactctttgctaagacttttagtcgttgacctcgag
cgcacaagcattgtagatgctctcgaaaagctacagtttgctaggaataaagtgtgtaat
atcgcaaagatcaatttcgctacgctagaagaggtgttgatgattgttcatgagatagac
catgtggtcagccgttcgggaatggacttggtggacaaactcaagacccaaactgatgat
gtggctattgacttggttattgcgcaatcaattttagcaatttcagcattgagaagccat
ttggttaacaaattttcacttggaagatccttgatagataggttcattcccggaaaagta
gatcccgacatgaggcatgcaatcaaatctagctaccagctacctctcgaaattcccgtt
ctccctgaaactttggagaaatctagtcttataatcatagtacagaacgaggtagacaaa
tatgcatag
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integrated database retrieval system