Scheffersomyces stipitis: PICST_68747
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Entry
PICST_68747 CDS
T01023
Symbol
RLM1
Name
(RefSeq) transcription factor of the MADS box family
KO
K09265
transcription factor RLM1
Organism
pic
Scheffersomyces stipitis
Pathway
pic04011
MAPK signaling pathway - yeast
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09130 Environmental Information Processing
09132 Signal transduction
04011 MAPK signaling pathway - yeast
PICST_68747 (RLM1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pic03000
]
PICST_68747 (RLM1)
Transcription factors [BR:
pic03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
MADS-box regulators of differentiation, Yeast regulators
PICST_68747 (RLM1)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRF-TF
Motif
Other DBs
NCBI-GeneID:
4851331
NCBI-ProteinID:
XP_001387522
JGI:
68747
UniProt:
A3GGD2
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All DBs
Position
1:1519243..1521492
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AA seq
517 aa
AA seq
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MGRRKIEIQPLTDDRNRTVTFVKRKAGLFKKAHELAVLCQVDLAVIIVGSNNKIYEFSSV
DTGELIKSYQHTCKTKQPQESKSPENYGNYRKKKFLNESLSRKSGASVLEEVDHDMDENE
VDSEYDSDSPEPKRHKRSYSDYSKNTNSKVFNSNRPPPPPPPHHISLSNMPTFNNPTTFR
MKEDDINTPGSTASNATDKVSHKRDDSTSSNQRPVLRVQIPTDAKSNSSNNKSSINDSAR
TITAIDTNMQNTSNNLNINNNHINQNHNQNHTNNSNLPNINTPKYSSFASFRSPDSRKPT
LPLPIQSKSQTSSPASATAPPLPIVNNGANMAINSNVANPNAMYYSSIPQGSPSNPYPNG
ILPTPILNQVFNQQYGQQLANGNDPHSGNAKFRPPIFTNLPNNVGEQTPISGLPSRYVND
MFPSPSNFYAPQDWPSGNTGMTPIHANIPQYFMNMLPSAGPSSAFPGNPGTKLPANVQQQ
QTSPAPATVPPKDGPLSPTIFMGTNAKIKLEEKKDSK
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
atgggcagaagaaaaatagagatccagcccttgacggatgacagaaacagaacagtaacg
tttgtcaaacgtaaggctgggcttttcaagaaagcacacgagttggccgtgctttgtcag
gtagatcttgcggtgatcatagttggttccaacaacaagatctacgaattttcgtctgtg
gacaccggcgaattgatcaaatcgtaccagcatacatgtaaaaccaagcagccgcaggag
ctgaaactgccggagaactacggaaactacaggaagaaaaagtttctaaatgagtctttg
tcgagaaagtctggagcgtccgtgctagaagaggttgatcatgatatggatgaaaacgag
gtcgattctgaatacgatagcgattcaccagagcctaagagacacaaaagatcgtacagc
gattactctaagaatactaattcaaaggtgttcaacagcaacaggccgcctccaccacct
ccacctcaccatatctctctttcaaacatgcctactttcaacaatcctacaacgtttaga
atgaaagaagacgacatcaacactcctggaagcactgcttcaaatgctacggacaaggtc
tcacacaagcgggatgactcgacttctagtaaccaaagaccggtgctaagagtccaaatt
ccaactgatgccaagagtaattcactgaataacaagagctccatcaacgatagtgcccgt
accattactgccatcgacaccaacatgcaaaatacgtctaacaatcttaacatcaacaat
aatcatattaaccagaatcataaccaaaatcatactaataatagtaacttgccgaacatc
aacaccccgaaatactcgagctttgcatcgttcagatcacctgattcacgtaaaccaacg
ctacctctacctatacaatcaaagtcacagacttcatcacctgccagtgccacggctcct
cctttgccaatcgttaataacggagccaacatggccattaacagtaatgtagccaaccct
aacgccatgtactactcatctataccccagggatcaccgtcaaatccatatcccaatgga
attctcccaacacccatacttaaccaggtattcaaccaacagtatggtcagcagcttgcg
aatggaaatgatcctcattctgggaatgcaaagttccgacctccaatattcaccaactta
cccaacaacgttggagaacagactcctatttcgggacttccctcgagatatgtcaacgac
atgtttccatcgccttccaacttctacgcacctcaagattggcctagtggaaacactgga
atgacgcccatccatgccaacatccctcaatacttcatgaacatgttaccctcggccggt
ccgtccagcgcatttccgggaaatccagggaccaagttgcctgcgaatgtacagcagcaa
cagacatctccagctcccgcaacagtgcctcctaaagacggacctctttcaccaactatc
ttcatgggaacgaatgcgaagattaagctagaggagaagaaggatagtaagtga
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