Scheffersomyces stipitis: PICST_69854
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Entry
PICST_69854 CDS
T01023
Symbol
PSE1
Name
(RefSeq) Karyopherin Functions in nuclear transport of proteins
KO
K20222
importin-5
Organism
pic
Scheffersomyces stipitis
Pathway
pic03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PICST_69854 (PSE1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pic03009
]
PICST_69854 (PSE1)
Ribosome biogenesis [BR:
pic03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
PICST_69854 (PSE1)
Pre-60S particles
PICST_69854 (PSE1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Importin_rep_6
Importin_rep_4
HEAT_EZ
Importin_rep_5
HEAT_EF3_N
HEAT
HEAT_2
TOR1L1_N
MMS19_C
Vac14_Fab1_bd
CLASP_N
Adaptin_N
XMAP215_CLASP_TOG
mTOR_dom
CEP104-like_TOG
ParcG
RIX1
Cnd1
HEAT_GCN1
Htt_N-HEAT_1
IFRD
DNA_alkylation
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-GeneID:
4837348
NCBI-ProteinID:
XP_001383094
JGI:
69854
UniProt:
A3LPM2
LinkDB
All DBs
Position
2:complement(1714265..1717711)
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AA seq
1090 aa
AA seq
DB search
MSVLPDQIRGVLAQLLHSLSSSDNSVRSGAEKSLESEWTNTSNVEMLLTYLAEEACSGAD
ESTRSFAAVLFRRVAIKSPKELASVTDRTIGVISEPVRQQIRSILLRGFASQQTNQVRHK
LSDAISEVAKEDASPQGSWNELIPALFEATRNTDPSFRESAFRVFSSAPELIDKSYLDSV
LPIFNSGFEDSDDDVRIAACSAFVAFFRELPKKSWQSLSPLLPNLLNSLPRFLSNGQDQA
LASVLESLIDLVELAPKMFKDMFPTIIEFCAAVSKNKELEANTRMASLELLTTFAEVSPQ
MCKRTQSYTDNMVLITLSMLTEVCMDDDEAAEWNNNDDSEDDEDEEHDAARQALDRVALR
LNGQALAGPLFQYLPAMIHSTSWRERQAALMALSSTAEGCVDVLIDEIPRILDLILPTLD
DSHPRVQYACCNALGQMSTDFADVIQRTAGARILPALISKLTNKSVPRVQAHAAAALVNF
SEAASKDTLEPYLDDLLNNLLVLLQSPKRYVQEQVLTTIAIIADAAENKFIKYYDTLMPI
LTSVLKTDIGDENSLIKAKCIECSTLIALAVGKEKFAPHCQDLIQLFGHVQETITQDDDP
IKQYLEQGWGRICRIIGKDFLPYLPAVLPPLFEAAKATQDISLLEEEQAEEFNSNEEWDV
INLSGKLIAVHTAALDDKVSAMDLLRTYAVQLKGDFFPWVKEIVQDIGIPALDFYLHDGV
RGSAALTLASLLRCSVYATGNSSNDTLELWSQISNKLVEVLTSEPVPQLLVAYYTALVES
INVLGPNSLSATQLKSLATSINANLVEIYERIKARDNEDDEYTEDIEEDEDEYTDEELLD
EINKAISAIFKNSKANFLPAFQELVHTIGSFVVDDNTNIKLCGLCVVCDVLEHCGADSVL
FKDIFLNVIGESITSAHAGIRQAASYAVGVAAQYGGEPFADFCLACLEPMFKMASVPDAR
ADENIHATENSVAAIAKVCHRFSSSIPNIDAVIDQWINLLPVVQDDQAAPFAYTFLSELI
QNQHPSIQNQTPKVVDSVIQALAHGSIAGNNAERLIASTRQLLSSIPQSEAMALLQKNSS
DIDVVQKYFS
NT seq
3273 nt
NT seq
+upstream
nt +downstream
nt
atgtccgttttgcccgaccaaatccgtggtgtgttggcccagttgttgcacagcttgtct
tcgtcagacaatagcgtcagatctggtgctgaaaaatcccttgaaagcgaatggactaat
actagcaatgttgagatgcttctcacttacttagccgaggaagcctgtagtggagccgat
gaaagtacccgatcctttgctgctgttttgtttagacgtgttgcaataaagtctcctaag
gagttggccagtgtaactgatagaactataggggtgatcagcgaacctgtaagacaacaa
attcgctcgatattattgcgaggattcgcctctcaacagacaaaccaagtgagacacaag
ctttctgatgcaatctcagaagttgcaaaggaagacgcttccccacaaggtagttggaac
gagcttattccagcattgtttgaagctaccagaaataccgatccaagttttcgcgagtct
gctttccgtgttttctcctcagcccccgagttgattgataagtcttatctcgatctggtg
ttaccaattttcaactccggtttcgaggatagtgacgatgatgttcgtattgctgcctgt
tctgcttttgtggcatttttcagagagttgcctaagaagagctggcagtcattatctcct
ttattacctaatcttttgaactccttgccaagatttttactgaatggccaagatcaagct
ttggcttctgtattggaatctctcatcgatttggtagagcttgccccaaagatgtttaaa
gatatgttccccaccatcatcgagttttgcgcagcagtctctaagaataaggaattggaa
gctaacactcgtatggcctctcttgaattgttaactacgtttgctgaagtgtctccacaa
atgtgtaagcgtactcagtcatatactgacaacatggtacttatcacattgtcaatgtta
accgaagtatgtatggacgatgatgaagcagcagaatggaacaacaacgatgactcagaa
gacgacgaagatgaagaacatgatgctgctcgtcaagcattagacagagtagcattaaga
ttgaacggtcaggctctagctggtcccttgttccagtatttacctgccatgatccactct
acatcttggagagagcgccaagctgctttaatggcattgtcgtctactgctgaaggatgt
gttgatgtattgattgatgagatccctagaattttagatcttattttgccaactttggat
gacagccatcctagagtccagtatgcgtgctgtaacgcattgggacagatgtctaccgat
tttgcagatgtcatccaaagaactgcaggtgcaaggatattgccagccttgatttccaaa
cttacaaacaaatctgttccaagggttcaagcccacgcggctgctgctttggttaatttc
tccgaggccgcatccaaagacacattagaaccttacttggacgatttattgaacaacttg
ttggtattgctacaatctccgaaaaggtacgtccaggaacaggtgttaacaaccattgct
attattgcagatgctgcagaaaacaaatttataaagtactatgatacattgatgccaatt
ttgacatccgtcttaaaaacggatataggggatgaaaacagtctaataaaggctaaatgc
attgaatgctccactttgattgctttggctgttggtaaggagaaatttgctcctcattgt
caggacttgattcaattatttggtcacgtacaagaaacaattacgcaagacgacgatcca
atcaagcagtatttagaacaaggctggggcagaatttgccgaattattggaaaggacttc
cttccgtaccttcctgccgtattgccccctcttttcgaagcagcaaaggcaactcaagac
atatctttgttggaagaggagcaagccgaagagttcaattcaaatgaagagtgggacgtt
attaatttatcaggaaagctcattgcagttcatactgcagctttggatgataaggtgtct
gcgatggatcttcttagaacctatgctgtacaattgaaaggagatttcttcccttgggta
aaagaaattgttcaagatattgggatcccggcgctagatttttacttgcatgatggagtg
agaggttcagctgccctaaccttagcttctttgttaaggtgctctgtttatgctacaggt
aattcatcaaatgacacattggaactctggtctcagatttcaaacaagcttgtggaggtt
ttgaccagtgaaccagttccccaattattggttgcctactacaccgctttggtcgaatcc
ataaacgtacttggtccaaattccttatctgcaacgcagttgaagtctttggctacttct
ataaatgcaaacttggttgagatttacgagagaataaaggccagagacaatgaagatgac
gagtacactgaagacatcgaggaagacgaagacgagtacactgatgaagagttgcttgat
gagatcaacaaagctatttctgctatcttcaagaattccaaggctaacttcttgccagca
tttcaagagcttgttcataccattggttctttcgtcgtagatgacaacactaacattaaa
ctttgcggattgtgtgttgtatgtgatgttttggaacactgcggagcagattcagtctta
tttaaagatatctttctcaatgtaatcggtgagtccatcacatcagctcacgcaggaatc
cgacaagctgcttcatatgcagtgggtgttgcagctcaatacggtggtgaaccttttgct
gacttctgtttggcctgcttggagccaatgttcaagatggcttccgtgcctgatgcgcgc
gctgatgagaacattcatgccacagaaaattcagttgcagcaattgcgaaagtttgccat
agattttcaagctctattccaaatattgatgctgttatagatcaatggataaacttgttg
ccagtcgttcaagacgatcaggctgcaccatttgcttacacgttcttgagtgagcttatt
cagaaccaacatccatcgattcaaaatcaaacacctaaggttgtagattccgtaattcag
gcattagcacatggttcgattgctggtaataatgcagaaagactcattgcatctacaaga
caattattgagctctattccacaaagtgaggctatggctttgttacaaaagaatagttct
gatatagacgtggtacaaaagtacttctcctag
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