Scheffersomyces stipitis: PICST_71431
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Entry
PICST_71431 CDS
T01023
Name
(RefSeq) histone deacetylase A
KO
K11407
histone deacetylase 6 [EC:
3.5.1.98
]
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
pic01009
]
PICST_71431
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pic03019
]
PICST_71431
04131 Membrane trafficking [BR:
pic04131
]
PICST_71431
03036 Chromosome and associated proteins [BR:
pic03036
]
PICST_71431
Enzymes [BR:
pic01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.98 histone deacetylase
PICST_71431
Protein phosphatases and associated proteins [BR:
pic01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
PICST_71431
Messenger RNA biogenesis [BR:
pic03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Stress granule specific factors
PICST_71431
Membrane trafficking [BR:
pic04131
]
Autophagy
Aggrephagy
Other aggrephagy associated proteins
PICST_71431
Chromosome and associated proteins [BR:
pic03036
]
Eukaryotic type
Histone modification proteins
HDACs (histone deacetylases)
Class II HDACs
PICST_71431
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Arb2-like
Pico_P1A
sCache_4
Motif
Other DBs
NCBI-GeneID:
4838284
NCBI-ProteinID:
XP_001383345
JGI:
71431
UniProt:
A3LR32
LinkDB
All DBs
Position
3:337073..340172
Genome browser
AA seq
807 aa
AA seq
DB search
MSEEPTGVAPESAPKKRLLEDADTDTKSTSNTSVSGTVENSTDINFHPDTNSTEASKGNP
DQIPVSNGDDHKRIKLEPKVGNESSIVVVPPTKPQLFYSPLKTGLVYDVRMRYHAKIFTS
YFEYIDPHPEDPRRIYRIYKKLAEAGLIVDSSLSGVEDIGPLMVKIPIREATAEEILEVH
SESHLKFIQSTETMSRERLLEETEKGDSIYVNNDSYFSAKLSCGGTIEACKAVIEGRVKN
SLAIVRPPGHHAEPETPGGFCLFSNVAVAAKNILKAYPESVRKIVIVDWDIHHGNGTQKS
FYDDPRVLYISLHRYENGRFYPGTKYGGADQVGEKDGEGYNLNIPWRNPGMHDGDYIYAF
NRVVLPVILEFDPDLIIVSSGFDAADGDIIGGCHVTPAGYGYMTHLLKGIAKGKLAVILE
GGYNLDSISKSALGVAKVLVGEPPEATVSMQPHLETIEVIDEVVKVQSRYWKSLRYGVPT
TSFDDVYDLNGTGSNYQLLNIGEPIRANQVNELFNKYSFVNLPIISSATEGGEKNGIFST
DLPSHLDDIIIASPDIYESTVVVLTIHDPPEIWANINPINGSIEGNSSVILEHPLMQIME
KMKKETDKSDSKEKIGYIDINVPSYQLPIPFGNSKQTSTYNPTFFAQELLLYIWDNYLAY
FSQLKKLVFVGFGDSYQAIVHLYGKRPSQDIKDLVKGTVAFVNRSNLKALVPVMDESMVD
WYYQNSVIFTSCSNPCWVNSNGTTRLGNGSTEANGGDDSNKRPRRKFGRVLKASVDGLYD
IIAERFDEGVDFILDSIEEYSSSESSN
NT seq
2424 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaggaaccaaccggcgttgcgcccgaatcggctccgaaaaaaaggcttcttgaa
gacgccgacaccgatactaagtctacgtctaacacttccgtttctggcactgttgaaaat
ctgacagacataaattttcatccagacaccaattcaacagaagcttcaaaagggaatccg
gaccagataccagtgtcgaatggcgatgaccataagagaataaagcttgagcccaaagtt
ggaaacgagtcttctattgtagtagtcccacccaccaaacctcagttgttctatagtccg
ttgaagactggattggtgtatgacgtgagaatgagataccatgcaaaaattttcacttct
tactttgagtacattgacccacatcccgaagacccgcgtcgtatctaccgaatctacaag
aagcttgcagaggctggccttatagtagatagctcgctatcaggtgtcgaggatataggt
cctcttatggtgaaaatccccatcagggaagccaccgctgaggaaatcttggaagtccat
tctgaaagtcatctcaaattcatccagtcgacagagactatgtctagagagcgtttatta
gaggagaccgaaaagggtgactctatttatgtgaataacgattcgtacttctcagctaaa
ctctcatgtggaggaaccattgaggcttgtaaggcagttattgaaggcagagtgaaaaac
tcgttggctattgtgagacctccgggccatcatgctgaaccagaaactccaggtgggttc
tgtcttttcagcaatgttgctgttgcagccaagaacatcctcaaggcataccctgagtct
gtacgcaagatcgttattgttgattgggacatccaccacggaaatggaacacaaaagtct
ttctatgacgatcctagagttctctacatttccttacatagatatgagaatggtagattc
taccccggtaccaagtacggaggagcagatcaggtaggagaaaaggatggggaagggtat
aatctcaatattccgtggagaaacccaggaatgcacgacggagactatatatatgcattc
aaccgggtagttcttcctgttattcttgaatttgaccctgatctcattatcgtaagttct
ggattcgacgctgctgacggcgatatcattggtggatgtcatgtgacacctgctggatat
ggctacatgacccatttgttgaagggcatagctaagggtaagttggcggtgattttagaa
ggaggctacaatttggactctatcagcaagagtgctctaggtgtagcaaaagttcttgta
ggagaacctccagaagccacagtgtctatgcagcctcatttggagactattgaagtaata
gatgaagtcgttaaggttcaatcaagatattggaagtctttgaggtacggggttcctaca
acttcatttgacgatgtctacgacttgaacggcactggctctaactaccaattgctcaac
attggtgagccaataagagccaaccaagtcaatgagttgttcaacaagtactcgtttgtc
aacctccccataatttccagtgctactgaaggaggagaaaagaatggcatcttcagcaca
gacttgccatcgcatttggacgatatcataatagctagtccagatatctatgaaagcaca
gtagtagttcttacgatccacgatccaccggagatctgggccaacatcaacccaatcaac
ggaagcattgagggcaattcttctgtaatattggaacatcccttgatgcagataatggag
aagatgaagaaggaaacagacaaaagcgattccaaagaaaaaattggctacatagatatc
aacgttccgtcataccagttgcccattccctttggaaattcaaagcagacttctacctat
aatcccacatttttcgcccaggagctcttgctttacatctgggacaactatttggcctac
ttttcgcagttaaagaagttagtgtttgtcggctttggtgattcgtaccaagctatagta
catctatatggtaaacgaccatctcaggatatcaaagatttagttaagggtacggtagcc
ttcgtgaacaggtcgaacttgaaggctttggtcccagtgatggatgagtcaatggtggac
tggtactatcagaactctgtgatcttcaccagttgttcgaatccatgttgggttaatctg
aacggaactactcgtttaggaaatggttccactgaagcaaacggaggtgacgatagcaac
aagagaccaaggagaaaatttggcagagtgttgaaggcatctgtggatggcttgtacgat
ataatcgccgaaagattcgacgaaggtgttgacttcatcttggattccatcgaagagtac
tccagcagcgagagcagcaactga
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