Scheffersomyces stipitis: PICST_71522
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Entry
PICST_71522 CDS
T01023
Symbol
YPT1
Name
(RefSeq) GTP-binding protein of the rab family
KO
K07874
Ras-related protein Rab-1A
Organism
pic
Scheffersomyces stipitis
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_71522 (YPT1)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pic04147
]
PICST_71522 (YPT1)
04031 GTP-binding proteins [BR:
pic04031
]
PICST_71522 (YPT1)
Membrane trafficking [BR:
pic04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Rab GTPases
PICST_71522 (YPT1)
Autophagy
Other autophagy associated proteins
PICST_71522 (YPT1)
Exosome [BR:
pic04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
PICST_71522 (YPT1)
Exosomal proteins of other body fluids (saliva and urine)
PICST_71522 (YPT1)
Exosomal proteins of colorectal cancer cells
PICST_71522 (YPT1)
GTP-binding proteins [BR:
pic04031
]
Small (monomeric) G-proteins
Rab Family
Rab1/35 [OT]
PICST_71522 (YPT1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
MMR_HSR1
SRPRB
AAA
ABC_tran
AAA_16
PduV-EutP
AAA_7
AAA_29
AAA_22
CENP-M
AAA_5
Motif
Other DBs
NCBI-GeneID:
4837695
NCBI-ProteinID:
XP_001383756
JGI:
71522
UniProt:
A3LRF3
LinkDB
All DBs
Position
3:complement(635413..636172)
Genome browser
AA seq
208 aa
AA seq
DB search
MNNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQ
IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLQEIDRYATGGVMKLLVG
NKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTSNVNAN
AASGANAGKSNVNLRGQSLTSGQTNSCC
NT seq
627 nt
NT seq
+upstream
nt +downstream
nt
atgaacaacgaatacgactatttattcaagttgttgttgatcggcgactcgggcgttggc
aaatcatgcttacttttgagattcgctgatgacacctatacgccagactacatttccacc
atcggtgtagatttcaagatcagaacgattgagttggacggtaagaccatcaagttacag
atctgggatactgctggccaagagcgtttcagaaccatcacgtcgtcatactaccgaggt
gctcacgggatcatcattgtgtatgatgtcacggaccaagaatcgttcaacaacgtcaag
cagtggctccaagaaattgaccgttatgccactggcggcgtgatgaagttgttggtgggt
aacaaggcagacttatcggacaagaagattgtcgaatacacggccgctaaggagtttgcg
gatgcgcttgacattccgtttttggaaacttctgctctttcgtccaccaacgttgaacag
gccttctacaccatggctagacagatcaaggctcagatgaccagtaacgtcaacgccaac
gctgcaagtggcgccaacgcaggtaagtccaatgtcaacttgaggggccagtcgttgact
tctggccaaacaaattcgtgttgttga
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integrated database retrieval system
