Scheffersomyces stipitis: PICST_72214
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Entry
PICST_72214 CDS
T01023
Name
(RefSeq) vesical coat protein
KO
K04646
clathrin heavy chain
Organism
pic
Scheffersomyces stipitis
Pathway
pic04142
Lysosome
pic04144
Endocytosis
pic05100
Bacterial invasion of epithelial cells
Brite
KEGG Orthology (KO) [BR:
pic00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
PICST_72214
04142 Lysosome
PICST_72214
09160 Human Diseases
09171 Infectious disease: bacterial
05100 Bacterial invasion of epithelial cells
PICST_72214
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
pic04131
]
PICST_72214
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pic04147
]
PICST_72214
Membrane trafficking [BR:
pic04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
PICST_72214
Exosome [BR:
pic04147
]
Exosomal proteins
Proteins found in most exosomes
PICST_72214
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_H_link
Clathrin_propel
Clathrin-link
TPR_IF140-IFT172
TPR_COPA_B
Motif
Other DBs
NCBI-GeneID:
4839183
NCBI-ProteinID:
XP_001385101
JGI:
72214
UniProt:
A3LV67
LinkDB
All DBs
Position
5:complement(458671..464102)
Genome browser
AA seq
1668 aa
AA seq
DB search
MSNDIPIDFTELTQLTSLGIQQSSLDSKSTTLESDHYVCVRESGPSGNTVAIIDLKNNNE
VTRKNMSADNAILHPSQFVISLRANGTTLQIFNLGTKQKLKSFSLAEPVVFWKWISDEYL
GLVTGSSIYYWNIFDGTDNGPVKLSERHDSLNNSQIINFVAEPSLNWFAVTGLAQENGRV
AGHIQLYSKTRNVSQAIEGHVSKFASIRLTGAAAPTKVFCVGNKNAQGQGNLHIIEIDHV
DGNPPFQKKSVDIFFPPDAANDFPISLQASDTYGIIYVLTKYGFIHLYDMETGSNLFVNR
ITADPVFTAASYNNGTGIITINRSGQVLSVEVSKDKIIPYVLEKLSNVPLALALASRGGF
PGAENLFQQQFQNLLNQGDYTNAAKVAASSEQLRTQDTINKLKHITPQPGQISPLLQYFS
TLLDRGTLNKYESIELAKPVLQQDRKPLFEKWLKEEKLTCSEELGDIVKSYNDTALALAV
YIRANVNIKVVSSLAELGQFDKIIPYCEKVGYNPDYTNLIQNLVRVNPDKASEFATSLLA
RPDIQINAENIADLFFSQNYIQQGTAFLLDYLKNDAPSEGHLQTKVLEINLLHAPQVADA
ILGNQMFSHYDKPTIGKLCEKSGLFQRALEHYDDLKDIKRVIVHTNVLANDWLVSYFGQL
NVQQSVACLKELLGSNMQQNLQVVIQVATKYSDLIGPLTLIKIFEDYKCTEGEYYYLSSI
VNLTQEPDVVFKYIQAAAKMNQTKEIERVVRDNNVYNGEKVKNFLKEFKLDDQLPLIIVC
DRFNYVHDLILFLYKNQYFKFIEVYVQSVNPANTPQVVAGLLDVDCDEAIIKNLLLTVLG
RVPIKELVAEVEKRNRLKILLPFLEKTLEGGSNDQEVYNTLAKIYIDSNNSPEKFLQENN
NYDTLAVGKYCEKRDPYLAYIAYSKGGNDDELINITNENKMYKYQARYLLAKSDFDLWNS
VLVEGNVHRRQLVDQVISTGIPELNDPEPISITVKAFMENDLPQELIELLEKIILEPSPF
NDNTSLQGLLILTAIKADPSKVSNYIEKLDKFDPVEIAPLCIDNQLYEEAFQVYDKFELR
SDAMKVLVEDIMSLDRGEQYAEKYDTSELWYQLGTAQLNGLRIPEAIDSYVKSKNPENFE
QVIEIAEHAGKEEELVKFLDMARETLREPVIDGALINSYATLDKLSEIEKFVGGTNVADL
ESIGDKLFEAKNYKAAKILYSNISKYSKLATTLVYLEDYQGAVDCARKASNTNVWKQVNS
ACIENKEFRLAQICGLNLIIDAEELPELVQTYEHNGYFNELIALFESGLGLERAHMGMFT
ELATLYAKYSPEKVMEHLKLFWSRINIPKVLTACEEAHLYPELIFLYCHYEEWDNAALTM
IERSEVAFDHASFKEIIVKAPNLEIYYKAIQFYINENPSLLVDLLSVLTPKLDLPRVVRI
FVKTDNLPLIKPFLISVLEKNNSVVNSAYHDLLIEEEDYKSLRSSIENETNNRFNKLDLA
ERLENHDLVFFRQISATLFTKEKKFNKAISILKNDKLWPDLIRTVAISKSQKIAHEALDY
FVETGNHECFVALLFTSYDYISYDYVLELSWLHNLGNFIKPYEISIVHENQKRINEVYED
LKKRREAAKQEEEQPTIAQPLMITNGSIGANVTGLGYQATGVGFGNAF
NT seq
5007 nt
NT seq
+upstream
nt +downstream
nt
atgtccaacgatatccctattgacttcacggagttgacccagttgaccctgctaggcatc
cagcagagctcgctagactccaagtcgaccaccttggaatcggaccactatgtctgtgtt
cgtgagtctgggccctctggaaacaccgtggccatcattgacttgaaaaacaacaacgaa
gtcacaagaaagaacatgtctgctgacaatgccatcttgcaccccagccaatttgtcatt
tccttgagagccaacggcaccacgttgcaaatcttcaacttgggcaccaaacagaagttg
aagtcattttccttggctgagcctgttgtgttctggaagtggatctctgatgagtacttg
gggttggtaacaggcagctccatctactactggaacatctttgacggcactgataacgga
cccgtcaagttgtcagagagacacgattcgttgaacaacagtcaaatcataaatttcgta
gccgagcctagcttaaactggtttgccgtgactggtctcgctcaggaaaacggtcgtgtc
gctggtcacatccagttgtactccaagactagaaacgtttcgcaagccattgaaggtcat
gtttccaagtttgcctcgatcagattaaccggtgctgctgctcctaccaaggtgttctgc
gtaggtaacaagaacgctcaaggtcaaggtaacttgcatatcatcgagatcgaccatgta
gacggaaatccacccttccagaagaagagtgtagatattttctttcctccagatgccgct
aacgatttccccatcagtttgcaagcttctgacacttatggtatcatctacgtgttgacc
aaatatggtttcatccacttgtacgacatggaaactggctccaacttgttcgtcaacaga
atcacggccgatccagtgtttactgctgcttcctacaacaatggaaccggtataatcacc
ataaacagatcgggtcaggtgttgagtgtagaagtttcaaaggacaagatcattccttat
gtcttggaaaagttgtctaatgtacctttagctttggctttagcttctcgtggcggcttc
cctggtgctgagaacttgttccagcaacagttccagaacttattgaaccagggcgattac
accaatgctgccaaggttgctgcttcttccgaacaattgcgtacccaagacactatcaac
aagttgaagcacataacacctcaaccgggccagatctcgcctctcttgcaatacttctca
acattgttggacagaggtaccttgaacaagtacgagtccatcgagttggccaaacccgtg
ttgcaacaggatagaaagccattgtttgagaagtggttgaaggaagagaagttgacctgt
tctgaagagttgggtgatattgtcaagtcctacaatgacactgccttggctttggctgtg
tacatcagagccaacgttaacatcaaggtcgtatcctctttggctgagttgggccagttc
gacaagatcattccctactgtgaaaaggttggctacaaccctgactacactaacttgatc
cagaacttggttagagtcaacccagacaaggctagcgagtttgctacctctttattggcc
aggccagacatccaaatcaatgctgaaaacattgctgatttgttcttctctcagaattac
attcaacagggtacagccttcttgttggactacttgaagaacgacgctccttctgagggc
catttgcagaccaaggtgttggaaattaacttgttgcatgccccacaagtagctgatgcc
atcttgggtaaccagatgttcagccactacgacaagcccaccattggtaagttgtgcgag
aagtccggtttgttccagagagctttggaacactatgatgacttaaaggatataaagaga
gtcattgtccacacgaatgttttggccaacgactggcttgtatcttactttggccaattg
aacgttcaacagtctgttgcttgtttgaaggagttgttgggaagcaacatgcaacagaac
ttgcaagttgtgatccaagttgccaccaagtactctgatttgattggtcccttgactttg
atcaagatctttgaagactacaagtgtactgaaggtgaatattactatttgtcttcaatt
gtcaacttgacccaagaacccgatgttgttttcaagtacatccaggctgctgctaaaatg
aaccagacaaaggaaattgaaagagttgtcagagacaacaatgtttacaacggtgaaaag
gtcaagaacttcttaaaggaattcaaattggacgaccagttgcctttgatcattgtttgt
gacagatttaactatgtccatgatttgattttgttcttgtacaagaatcagtacttcaag
ttcattgaggtctacgttcagtcggtcaacccagccaacaccccacaggttgttgctggt
ttgttggatgttgactgtgacgaagctataatcaagaacttgttattgactgtcttagga
agagttcctatcaaggagttggtagctgaagttgaaaagagaaacagactcaagatattg
ttgcccttcttggagaagactttggagggaggttccaacgatcaggaagtctacaacact
ttggctaagatctatatcgattctaacaactctccggagaagtttttgcaagaaaacaac
aactacgacactttggctgttggtaagtactgtgaaaagagagatccctacttggcttac
atagcttactccaagggtggtaacgatgatgagttgatcaacatcaccaacgagaacaag
atgtacaaataccaagccagatacttattggcaaagtctgactttgacttgtggaattct
gttttggtagagggcaacgttcacagaagacagttggtagaccaagtcatctcaaccggt
attcctgaattgaatgatcctgaacctatctcgatcaccgttaaggctttcatggaaaac
gatttacctcaagaattgattgagttgttagaaaagattattcttgagccatctcctttc
aatgacaacacctccttgcaaggattattgatcttgactgctatcaaggctgacccatcc
aaggtttctaactatattgagaagttggacaagtttgatccagtcgagattgctccattg
tgtattgacaaccagttgtatgaagaagcctttcaggtctacgacaagtttgaattgaga
tctgatgccatgaaggttttggttgaagacatcatgtccttggacagaggtgagcagtac
gctgaaaagtacgatacttctgaattgtggtatcaattgggtactgctcaattaaacggt
ttgagaattccagaagctatcgattcttatgttaagtctaagaacccagaaaactttgaa
caagttattgaaatcgctgaacatgctggtaaagaagaagagttagtcaagttcttggat
atggccagagaaactttgagagaaccagtcattgatggtgctttgattaactcttatgct
actttggacaagttgagcgagattgaaaagtttgttggtggaaccaatgtcgctgacttg
gaatctattggtgacaagttattcgaagctaagaactacaaagctgctaagatcttgtat
tccaacatctccaagtactccaagcttgcaaccactttggtttacttggaagactaccaa
ggagctgttgactgtgctagaaaggcatccaacactaatgtttggaaacaggtcaactct
gcctgtattgaaaacaaggagttcaggttggctcaaatttgtggtttgaatttgattatc
gatgccgaagaattgcctgaattggtacagacttatgagcacaacggctactttaatgag
ttgattgcacttttcgaaagtggtttaggtttggaaagagcccatatgggtatgttcact
gaattggctaccttatatgcgaaatatagccctgaaaaggttatggaacacttaaaattg
ttctggtccagaatcaacattccaaaagtgttgactgcgtgcgaggaggcccacttgtac
cctgaattaattttcttgtactgccattacgaagaatgggacaatgctgctttgactatg
attgaaagatccgaagttgcttttgatcatgcttcctttaaagaaatcattgtcaaggct
cctaacttggaaatctactacaaggctattcagttctacattaatgaaaacccatctttg
ttagttgacttgttgtctgttttgacaccaaagttggacttgcctagagttgttagaatc
tttgttaagaccgacaacttgccattgatcaagccattcttgatctcggttttggaaaag
aacaactctgttgtcaactctgcttaccacgatttgttgattgaagaagaagattacaag
tcgttgagatcttctatcgaaaacgaaaccaacaacagattcaacaagttggacttggcc
gagagattggagaaccatgatctcgttttcttcagacagatttccgctactttgttcact
aaggaaaagaaattcaacaaggctatctctatcttgaagaacgacaagttgtggccggat
ttgattagaactgttgctatctcgaaatcccaaaagattgctcacgaagcattggactac
ttcgttgaaactggtaaccatgaatgttttgttgctttgttatttacctcttacgactac
atttcttacgactatgtgcttgaattatcgtggttgcataacttgggtaatttcatcaaa
ccatacgaaatttccattgtccacgaaaatcaaaagagaattaacgaagtatacgaagat
ttaaagaagagaagagaagccgccaagcaagaagaagagcaacccactattgctcaacca
ttgatgattaccaatggttccattggtgctaatgtcaccggcttgggctaccaagccaca
ggcgttggctttggaaacgctttttga
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integrated database retrieval system